RNA–Protein interactions for RNA: ENST00000484178.5

SSBP1-211, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSBP1, Length 676 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-211ENST00000484178 COL20A1Q9P218 1284 aa4.84□□□□□ -1.63
SSBP1-211ENST00000484178 LRFN1Q9P244 771 aa4.84□□□□□ -1.63
SSBP1-211ENST00000484178 IFT80Q9P2H3 777 aaPredicted RBP4.84□□□□□ -1.63
SSBP1-211ENST00000484178 AFF4Q9UHB7 1163 aaKnown RBP4.84□□□□□ -1.63
SSBP1-211ENST00000484178 ITGA11Q9UKX5 1188 aa4.84□□□□□ -1.63
SSBP1-211ENST00000484178 SLC39A10Q9ULF5 831 aa4.84□□□□□ -1.63
SSBP1-211ENST00000484178 AGTPBP1Q9UPW5 1226 aa4.84□□□□□ -1.63
SSBP1-211ENST00000484178 GMEB1Q9Y692 573 aa4.84□□□□□ -1.63
SSBP1-211ENST00000484178 MYH4Q9Y623 1939 aa4.84□□□□□ -1.64
SSBP1-211ENST00000484178 SSC5DA1L4H1 1573 aa4.83□□□□□ -1.64
SSBP1-211ENST00000484178 ASTN2O75129 1339 aaPredicted RBP4.83□□□□□ -1.64
SSBP1-211ENST00000484178 DPPA5A6NC42 116 aa4.83□□□□□ -1.64
SSBP1-211ENST00000484178 KRTAP29-1A8MX34 341 aaPredicted RBP4.83□□□□□ -1.64
SSBP1-211ENST00000484178 B4E171 279 aa4.83□□□□□ -1.64
SSBP1-211ENST00000484178 POC1B-GALNT4F8VUJ3 575 aa4.83□□□□□ -1.64
SSBP1-211ENST00000484178 SLCO1B7G3V0H7 640 aa4.83□□□□□ -1.64
SSBP1-211ENST00000484178 H0YJX3 145 aa4.83□□□□□ -1.64
SSBP1-211ENST00000484178 SGK1O00141 431 aa4.83□□□□□ -1.64
SSBP1-211ENST00000484178 POLRMTO00411 1230 aaKnown RBP4.83□□□□□ -1.64
SSBP1-211ENST00000484178 CAPN9O14815 690 aa4.83□□□□□ -1.64
SSBP1-211ENST00000484178 SLC16A4O15374 487 aa4.83□□□□□ -1.64
SSBP1-211ENST00000484178 ITGA10O75578 1167 aa4.83□□□□□ -1.64
SSBP1-211ENST00000484178 RNF8O76064 485 aa4.83□□□□□ -1.64
SSBP1-211ENST00000484178 GH1P01241 217 aa4.83□□□□□ -1.64
SSBP1-211ENST00000484178 HLA-DRAP01903 254 aa4.83□□□□□ -1.64
SSBP1-211ENST00000484178 APOA4P06727 396 aa4.83□□□□□ -1.64
SSBP1-211ENST00000484178 ADRB2P07550 413 aa4.83□□□□□ -1.64
SSBP1-211ENST00000484178 DLDP09622 509 aaKnown RBP4.83□□□□□ -1.64
SSBP1-211ENST00000484178 PABPC4LP0CB38 370 aaKnown RBP4.83□□□□□ -1.64
SSBP1-211ENST00000484178 ARP10275 920 aa4.83□□□□□ -1.64
SSBP1-211ENST00000484178 CKMT1AP12532 417 aa4.83□□□□□ -1.64
SSBP1-211ENST00000484178 MLNP12872 115 aa4.83□□□□□ -1.64
SSBP1-211ENST00000484178 TNNI1P19237 187 aa4.83□□□□□ -1.64
SSBP1-211ENST00000484178 TGM2P21980 687 aa4.83□□□□□ -1.64
SSBP1-211ENST00000484178 KCNA3P22001 575 aa4.83□□□□□ -1.64
SSBP1-211ENST00000484178 PRKCHP24723 683 aa4.83□□□□□ -1.64
SSBP1-211ENST00000484178 GCAP28676 217 aa4.83□□□□□ -1.64
SSBP1-211ENST00000484178 EPHB2P29323 1055 aa4.83□□□□□ -1.64
SSBP1-211ENST00000484178 RGS2P41220 211 aa4.83□□□□□ -1.64
SSBP1-211ENST00000484178 TSPAN7P41732 249 aa4.83□□□□□ -1.64
SSBP1-211ENST00000484178 CDKN2BP42772 138 aa4.83□□□□□ -1.64
SSBP1-211ENST00000484178 CACNA2D1P54289 1103 aa4.83□□□□□ -1.64
SSBP1-211ENST00000484178 TRPC3Q13507 836 aa4.83□□□□□ -1.64
SSBP1-211ENST00000484178 RCN2Q14257 317 aa4.83□□□□□ -1.64
SSBP1-211ENST00000484178 FRG1Q14331 258 aaKnown RBP4.83□□□□□ -1.64
SSBP1-211ENST00000484178 RCN1Q15293 331 aa4.83□□□□□ -1.64
SSBP1-211ENST00000484178 PKN2Q16513 984 aaKnown RBP4.83□□□□□ -1.64
SSBP1-211ENST00000484178 SLC5A9Q2M3M2 681 aa4.83□□□□□ -1.64
SSBP1-211ENST00000484178 KHDC1Q4VXA5 237 aaKnown RBP4.83□□□□□ -1.64
SSBP1-211ENST00000484178 LRRC23Q53EV4 343 aaPredicted RBP4.83□□□□□ -1.64
SSBP1-211ENST00000484178 BOLA3Q53S33 107 aa4.83□□□□□ -1.64
SSBP1-211ENST00000484178 FBXO47Q5MNV8 452 aa4.83□□□□□ -1.64
SSBP1-211ENST00000484178 ZNF362Q5T0B9 420 aaPredicted RBP4.83□□□□□ -1.64
SSBP1-211ENST00000484178 GJC2Q5T442 439 aaPredicted RBP4.83□□□□□ -1.64
SSBP1-211ENST00000484178 OR52E8Q6IFG1 317 aa4.83□□□□□ -1.64
SSBP1-211ENST00000484178 AADACL2Q6P093 401 aa4.83□□□□□ -1.64
SSBP1-211ENST00000484178 ABHD15Q6UXT9 468 aa4.83□□□□□ -1.64
SSBP1-211ENST00000484178 FAM47EQ6ZV65 393 aa4.83□□□□□ -1.64
SSBP1-211ENST00000484178 KRT77Q7Z794 578 aa4.83□□□□□ -1.64
SSBP1-211ENST00000484178 LRRC6Q86X45 466 aa4.83□□□□□ -1.64
SSBP1-211ENST00000484178 CBWD2Q8IUF1 395 aa4.83□□□□□ -1.64
SSBP1-211ENST00000484178 ZDHHC17Q8IUH5 632 aa4.83□□□□□ -1.64
SSBP1-211ENST00000484178 SCYL3Q8IZE3 742 aa4.83□□□□□ -1.64
SSBP1-211ENST00000484178 ESX1Q8N693 406 aa4.83□□□□□ -1.64
SSBP1-211ENST00000484178 PCYOX1LQ8NBM8 494 aa4.83□□□□□ -1.64
SSBP1-211ENST00000484178 SLC4A11Q8NBS3 891 aa4.83□□□□□ -1.64
SSBP1-211ENST00000484178 GPR156Q8NFN8 814 aa4.83□□□□□ -1.64
SSBP1-211ENST00000484178 CMASQ8NFW8 434 aaPredicted RBP4.83□□□□□ -1.64
SSBP1-211ENST00000484178 CYP2W1Q8TAV3 490 aa4.83□□□□□ -1.64
SSBP1-211ENST00000484178 TCP10LQ8TDR4 215 aa4.83□□□□□ -1.64
SSBP1-211ENST00000484178 PPP4R1Q8TF05 950 aa4.83□□□□□ -1.64
SSBP1-211ENST00000484178 DDI1Q8WTU0 396 aa4.83□□□□□ -1.64
SSBP1-211ENST00000484178 DCAKDQ8WVC6 231 aa4.83□□□□□ -1.64
SSBP1-211ENST00000484178 CDKL2Q92772 493 aa4.83□□□□□ -1.64
SSBP1-211ENST00000484178 SEMA4DQ92854 862 aa4.83□□□□□ -1.64
SSBP1-211ENST00000484178 MUL1Q969V5 352 aa4.83□□□□□ -1.64
SSBP1-211ENST00000484178 CCDC127Q96BQ5 260 aa4.83□□□□□ -1.64
SSBP1-211ENST00000484178 NMD3Q96D46 503 aaKnown RBP4.83□□□□□ -1.64
SSBP1-211ENST00000484178 HAPLN3Q96S86 360 aa4.83□□□□□ -1.64
SSBP1-211ENST00000484178 KCNK16Q96T55 309 aa4.83□□□□□ -1.64
SSBP1-211ENST00000484178 P2RX7Q99572 595 aaKnown RBP4.83□□□□□ -1.64
SSBP1-211ENST00000484178 SERPINI1Q99574 410 aa4.83□□□□□ -1.64
SSBP1-211ENST00000484178 HEPHQ9BQS7 1158 aa4.83□□□□□ -1.64
SSBP1-211ENST00000484178 MAK16Q9BXY0 300 aaKnown RBP4.83□□□□□ -1.64
SSBP1-211ENST00000484178 CADM1Q9BY67 442 aaKnown RBP4.83□□□□□ -1.64
SSBP1-211ENST00000484178 YIPF3Q9GZM5 350 aa4.83□□□□□ -1.64
SSBP1-211ENST00000484178 C2orf40Q9H1Z8 148 aa4.83□□□□□ -1.64
SSBP1-211ENST00000484178 CYP3A43Q9HB55 503 aa4.83□□□□□ -1.64
SSBP1-211ENST00000484178 C8orf4Q9NR00 106 aa4.83□□□□□ -1.64
SSBP1-211ENST00000484178 TDP1Q9NUW8 608 aa4.83□□□□□ -1.64
SSBP1-211ENST00000484178 PIH1D1Q9NWS0 290 aaKnown RBP4.83□□□□□ -1.64
SSBP1-211ENST00000484178 GPRC5DQ9NZD1 345 aa4.83□□□□□ -1.64
SSBP1-211ENST00000484178 C6orf203Q9P0P8 240 aaPredicted RBP4.83□□□□□ -1.64
SSBP1-211ENST00000484178 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.83□□□□□ -1.64
SSBP1-211ENST00000484178 HEY2Q9UBP5 337 aa4.83□□□□□ -1.64
SSBP1-211ENST00000484178 TBK1Q9UHD2 729 aa4.83□□□□□ -1.64
SSBP1-211ENST00000484178 SLC13A4Q9UKG4 626 aa4.83□□□□□ -1.64
SSBP1-211ENST00000484178 TLK1Q9UKI8 766 aa4.83□□□□□ -1.64
SSBP1-211ENST00000484178 ITGB1BP2Q9UKP3 347 aa4.83□□□□□ -1.64
SSBP1-211ENST00000484178 AGO2Q9UKV8 859 aaKnown RBP4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms