RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 MTCH2Q9Y6C9 303 aa13.92□□□□□ -0.18
CLK3-204ENST00000483723 PRSS21Q9Y6M0 314 aa13.92□□□□□ -0.18
CLK3-204ENST00000483723 PLXNA2O75051 1894 aa13.92□□□□□ -0.18
CLK3-204ENST00000483723 TBC1D3BA6NDS4 549 aa13.91□□□□□ -0.18
CLK3-204ENST00000483723 GOLGA8CPA6NN73 597 aa13.91□□□□□ -0.18
CLK3-204ENST00000483723 KERAO60938 352 aa13.91□□□□□ -0.18
CLK3-204ENST00000483723 KAT7O95251 611 aa13.91□□□□□ -0.18
CLK3-204ENST00000483723 CHRNGP07510 517 aa13.91□□□□□ -0.18
CLK3-204ENST00000483723 TPBGLP0DKB5 382 aa13.91□□□□□ -0.18
CLK3-204ENST00000483723 CHRM3P20309 590 aa13.91□□□□□ -0.18
CLK3-204ENST00000483723 ITGB7P26010 798 aa13.91□□□□□ -0.18
CLK3-204ENST00000483723 GRIA2P42262 883 aa13.91□□□□□ -0.18
CLK3-204ENST00000483723 IL2P60568 153 aa13.91□□□□□ -0.18
CLK3-204ENST00000483723 PRKAA1Q13131 559 aa13.91□□□□□ -0.18
CLK3-204ENST00000483723 TUBB3Q13509 450 aa13.91□□□□□ -0.18
CLK3-204ENST00000483723 ENPP2Q13822 863 aa13.91□□□□□ -0.18
CLK3-204ENST00000483723 ELAVL3Q14576 367 aaKnown RBP13.91□□□□□ -0.18
CLK3-204ENST00000483723 ITPRIPL2Q3MIP1 535 aa13.91□□□□□ -0.18
CLK3-204ENST00000483723 ATP13A5Q4VNC0 1218 aa13.91□□□□□ -0.18
CLK3-204ENST00000483723 LRRC73Q5JTD7 316 aa13.91□□□□□ -0.18
CLK3-204ENST00000483723 PARS2Q7L3T8 475 aaKnown RBP13.91□□□□□ -0.18
CLK3-204ENST00000483723 SIDT2Q8NBJ9 832 aaKnown RBP13.91□□□□□ -0.18
CLK3-204ENST00000483723 INPP5DQ92835 1189 aa13.91□□□□□ -0.18
CLK3-204ENST00000483723 ERP27Q96DN0 273 aa13.91□□□□□ -0.18
CLK3-204ENST00000483723 SAR1AQ9NR31 198 aa13.91□□□□□ -0.18
CLK3-204ENST00000483723 SMOXQ9NWM0 555 aa13.91□□□□□ -0.18
CLK3-204ENST00000483723 CLDND1Q9NY35 253 aa13.91□□□□□ -0.18
CLK3-204ENST00000483723 NCKIPSDQ9NZQ3 722 aa13.91□□□□□ -0.18
CLK3-204ENST00000483723 KLHL42Q9P2K6 505 aa13.91□□□□□ -0.18
CLK3-204ENST00000483723 SUN2Q9UH99 717 aa13.91□□□□□ -0.18
CLK3-204ENST00000483723 GNPTGQ9UJJ9 305 aa13.91□□□□□ -0.18
CLK3-204ENST00000483723 IQCF5A8MTL0 148 aa13.9□□□□□ -0.18
CLK3-204ENST00000483723 ANHXE9PGG2 379 aa13.9□□□□□ -0.18
CLK3-204ENST00000483723 PSMD11O00231 422 aa13.9□□□□□ -0.18
CLK3-204ENST00000483723 KLK8O60259 260 aa13.9□□□□□ -0.18
CLK3-204ENST00000483723 HLA-EP13747 358 aa13.9□□□□□ -0.18
CLK3-204ENST00000483723 HNRNPLP14866 589 aaKnown RBP eCLIP13.9□□□□□ -0.18
CLK3-204ENST00000483723 SERPINB3P29508 390 aa13.9□□□□□ -0.18
CLK3-204ENST00000483723 MMP12P39900 470 aa13.9□□□□□ -0.18
CLK3-204ENST00000483723 NSG1P42857 185 aa13.9□□□□□ -0.18
CLK3-204ENST00000483723 RPL14P50914 215 aaKnown RBP13.9□□□□□ -0.18
CLK3-204ENST00000483723 PTRHD1Q6GMV3 140 aaKnown RBP13.9□□□□□ -0.18
CLK3-204ENST00000483723 LIPIQ6XZB0 460 aa13.9□□□□□ -0.18
CLK3-204ENST00000483723 MTSS1LQ765P7 747 aa13.9□□□□□ -0.18
CLK3-204ENST00000483723 CLNKQ7Z7G1 428 aa13.9□□□□□ -0.18
CLK3-204ENST00000483723 PIP4K2CQ8TBX8 421 aa13.9□□□□□ -0.18
CLK3-204ENST00000483723 EEF1AKMT1Q8WVE0 214 aa13.9□□□□□ -0.18
CLK3-204ENST00000483723 ARRDC3Q96B67 414 aa13.9□□□□□ -0.18
CLK3-204ENST00000483723 FAM136AQ96C01 138 aa13.9□□□□□ -0.18
CLK3-204ENST00000483723 NECTIN4Q96NY8 510 aa13.9□□□□□ -0.18
CLK3-204ENST00000483723 TMEM237Q96Q45 408 aa13.9□□□□□ -0.18
CLK3-204ENST00000483723 EBF4Q9BQW3 602 aa13.9□□□□□ -0.18
CLK3-204ENST00000483723 FAM83DQ9H4H8 585 aa13.9□□□□□ -0.18
CLK3-204ENST00000483723 ZFP69BQ9UJL9 534 aa13.9□□□□□ -0.18
CLK3-204ENST00000483723 PRDM4Q9UKN5 801 aa13.9□□□□□ -0.18
CLK3-204ENST00000483723 E5RI56 91 aa13.9□□□□□ -0.18
CLK3-204ENST00000483723 H0Y858 1186 aa13.9□□□□□ -0.18
CLK3-204ENST00000483723 MATN2O00339 956 aa13.9□□□□□ -0.18
CLK3-204ENST00000483723 SPINT1O43278 529 aa13.9□□□□□ -0.18
CLK3-204ENST00000483723 SMIM24O75264 130 aa13.9□□□□□ -0.18
CLK3-204ENST00000483723 DNAJC8O75937 253 aaPredicted RBP13.9□□□□□ -0.18
CLK3-204ENST00000483723 ATP5HO75947 161 aa13.9□□□□□ -0.18
CLK3-204ENST00000483723 T-ENOLP0DO92 83 aa13.9□□□□□ -0.18
CLK3-204ENST00000483723 GM2AP17900 193 aa13.9□□□□□ -0.18
CLK3-204ENST00000483723 IL12RB1P42701 662 aa13.9□□□□□ -0.18
CLK3-204ENST00000483723 CCR10P46092 362 aa13.9□□□□□ -0.18
CLK3-204ENST00000483723 IDH3AP50213 366 aa13.9□□□□□ -0.18
CLK3-204ENST00000483723 B4GALNT1Q00973 533 aa13.9□□□□□ -0.18
CLK3-204ENST00000483723 CRY1Q16526 586 aa13.9□□□□□ -0.18
CLK3-204ENST00000483723 UNC50Q53HI1 259 aa13.9□□□□□ -0.18
CLK3-204ENST00000483723 ZNF678Q5SXM1 525 aa13.9□□□□□ -0.18
CLK3-204ENST00000483723 GPRC6AQ5T6X5 926 aa13.9□□□□□ -0.18
CLK3-204ENST00000483723 EPGNQ6UW88 154 aa13.9□□□□□ -0.18
CLK3-204ENST00000483723 Q6ZVL8 140 aa13.9□□□□□ -0.18
CLK3-204ENST00000483723 CPNE9Q8IYJ1 553 aa13.9□□□□□ -0.18
CLK3-204ENST00000483723 NRSN1Q8IZ57 195 aa13.9□□□□□ -0.18
CLK3-204ENST00000483723 TRAM1L1Q8N609 369 aa13.9□□□□□ -0.18
CLK3-204ENST00000483723 SUSD6Q92537 303 aa13.9□□□□□ -0.18
CLK3-204ENST00000483723 TRMOQ9BU70 441 aa13.9□□□□□ -0.18
CLK3-204ENST00000483723 PRSS16Q9NQE7 514 aa13.9□□□□□ -0.18
CLK3-204ENST00000483723 ZDHHC2Q9UIJ5 367 aa13.9□□□□□ -0.18
CLK3-204ENST00000483723 SLCO1B7G3V0H7 640 aa13.89□□□□□ -0.19
CLK3-204ENST00000483723 CDC7O00311 574 aa13.89□□□□□ -0.19
CLK3-204ENST00000483723 KPNA3O00505 521 aaPredicted RBP13.89□□□□□ -0.19
CLK3-204ENST00000483723 AREL1O15033 823 aa13.89□□□□□ -0.19
CLK3-204ENST00000483723 GRID2O43424 1007 aa13.89□□□□□ -0.19
CLK3-204ENST00000483723 APODP05090 189 aa13.89□□□□□ -0.19
CLK3-204ENST00000483723 XPAP23025 273 aaPredicted RBP13.89□□□□□ -0.19
CLK3-204ENST00000483723 MPSTP25325 297 aa13.89□□□□□ -0.19
CLK3-204ENST00000483723 NCALDP61601 193 aa13.89□□□□□ -0.19
CLK3-204ENST00000483723 HERVK_113P63132 956 aa13.89□□□□□ -0.19
CLK3-204ENST00000483723 CREB5Q02930 508 aa13.89□□□□□ -0.19
CLK3-204ENST00000483723 KRT72Q14CN4 511 aa13.89□□□□□ -0.19
CLK3-204ENST00000483723 HENMT1Q5T8I9 393 aaKnown RBP13.89□□□□□ -0.19
CLK3-204ENST00000483723 ERAP2Q6P179 960 aa13.89□□□□□ -0.19
CLK3-204ENST00000483723 SERPINA13PQ6UXR4 307 aa13.89□□□□□ -0.19
CLK3-204ENST00000483723 CLDN19Q8N6F1 224 aa13.89□□□□□ -0.19
CLK3-204ENST00000483723 CCNYL1Q8N7R7 359 aa13.89□□□□□ -0.19
CLK3-204ENST00000483723 SMRP1Q8NCR6 262 aa13.89□□□□□ -0.19
CLK3-204ENST00000483723 LKAAEAR1Q8TD35 194 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms