RNA–Protein interactions for RNA: ENST00000483503.5

SND1-210, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-210ENST00000483503 ZDHHC3Q9NYG2 299 aa11.82□□□□□ -0.52
SND1-210ENST00000483503 PKD2L2Q9NZM6 624 aa11.82□□□□□ -0.52
SND1-210ENST00000483503 PRPF19Q9UMS4 504 aaKnown RBP11.82□□□□□ -0.52
SND1-210ENST00000483503 ERVW-1Q9UQF0 538 aa11.82□□□□□ -0.52
SND1-210ENST00000483503 NPEPPSL1A6NEC2 478 aa11.81□□□□□ -0.52
SND1-210ENST00000483503 EIF3FO00303 357 aaPredicted RBP11.81□□□□□ -0.52
SND1-210ENST00000483503 CDC7O00311 574 aa11.81□□□□□ -0.52
SND1-210ENST00000483503 GAPDHSO14556 408 aaPredicted RBP11.81□□□□□ -0.52
SND1-210ENST00000483503 CCNT2O60583 730 aaKnown RBP11.81□□□□□ -0.52
SND1-210ENST00000483503 SKAP2O75563 359 aaPredicted RBP11.81□□□□□ -0.52
SND1-210ENST00000483503 CRCPO75575 148 aa11.81□□□□□ -0.52
SND1-210ENST00000483503 TSPAN12O95859 305 aa11.81□□□□□ -0.52
SND1-210ENST00000483503 RPS17P08708 135 aaKnown RBP11.81□□□□□ -0.52
SND1-210ENST00000483503 CBSLP0DN79 551 aa11.81□□□□□ -0.52
SND1-210ENST00000483503 CEBPBP17676 345 aa11.81□□□□□ -0.52
SND1-210ENST00000483503 EEF1DP29692 281 aaKnown RBP11.81□□□□□ -0.52
SND1-210ENST00000483503 CBSP35520 551 aa11.81□□□□□ -0.52
SND1-210ENST00000483503 IRS1P35568 1242 aa11.81□□□□□ -0.52
SND1-210ENST00000483503 NSG1P42857 185 aa11.81□□□□□ -0.52
SND1-210ENST00000483503 STX1BP61266 288 aa11.81□□□□□ -0.52
SND1-210ENST00000483503 CLCQ05315 142 aa11.81□□□□□ -0.52
SND1-210ENST00000483503 STX5Q13190 355 aa11.81□□□□□ -0.52
SND1-210ENST00000483503 ARHGEF7Q14155 803 aa11.81□□□□□ -0.52
SND1-210ENST00000483503 CHRNA6Q15825 494 aa11.81□□□□□ -0.52
SND1-210ENST00000483503 CCDC6Q16204 474 aa11.81□□□□□ -0.52
SND1-210ENST00000483503 GEN1Q17RS7 908 aa11.81□□□□□ -0.52
SND1-210ENST00000483503 ASTLQ6HA08 431 aaPredicted RBP11.81□□□□□ -0.52
SND1-210ENST00000483503 DPY19L3Q6ZPD9 716 aa11.81□□□□□ -0.52
SND1-210ENST00000483503 FRA10AC1Q70Z53 315 aa11.81□□□□□ -0.52
SND1-210ENST00000483503 ADIPOR2Q86V24 386 aa11.81□□□□□ -0.52
SND1-210ENST00000483503 NXPE1Q8N323 547 aa11.81□□□□□ -0.52
SND1-210ENST00000483503 KYQ8NBH2 561 aa11.81□□□□□ -0.52
SND1-210ENST00000483503 OR56A4Q8NGH8 313 aa11.81□□□□□ -0.52
SND1-210ENST00000483503 DTX3LQ8TDB6 740 aa11.81□□□□□ -0.52
SND1-210ENST00000483503 EEF1AKMT1Q8WVE0 214 aa11.81□□□□□ -0.52
SND1-210ENST00000483503 SMG7Q92540 1137 aaKnown RBP11.81□□□□□ -0.52
SND1-210ENST00000483503 FUBP1Q96AE4 644 aaKnown RBP11.81□□□□□ -0.52
SND1-210ENST00000483503 PBXIP1Q96AQ6 731 aa11.81□□□□□ -0.52
SND1-210ENST00000483503 EID2BQ96D98 161 aa11.81□□□□□ -0.52
SND1-210ENST00000483503 MOCOSQ96EN8 888 aa11.81□□□□□ -0.52
SND1-210ENST00000483503 PPP1R36Q96LQ0 422 aa11.81□□□□□ -0.52
SND1-210ENST00000483503 CATSPER2Q96P56 530 aa11.81□□□□□ -0.52
SND1-210ENST00000483503 PANX3Q96QZ0 392 aa11.81□□□□□ -0.52
SND1-210ENST00000483503 FAM126AQ9BYI3 521 aaPredicted RBP11.81□□□□□ -0.52
SND1-210ENST00000483503 LMAN2LQ9H0V9 348 aa11.81□□□□□ -0.52
SND1-210ENST00000483503 LINC00597Q9H2U6 94 aa11.81□□□□□ -0.52
SND1-210ENST00000483503 EFCAB1Q9HAE3 211 aa11.81□□□□□ -0.52
SND1-210ENST00000483503 ZBTB26Q9HCK0 441 aa11.81□□□□□ -0.52
SND1-210ENST00000483503 SARS2Q9NP81 518 aaKnown RBP11.81□□□□□ -0.52
SND1-210ENST00000483503 MID1IP1Q9NPA3 183 aa11.81□□□□□ -0.52
SND1-210ENST00000483503 ACSS2Q9NR19 701 aa11.81□□□□□ -0.52
SND1-210ENST00000483503 LATS2Q9NRM7 1088 aa11.81□□□□□ -0.52
SND1-210ENST00000483503 CD274Q9NZQ7 290 aa11.81□□□□□ -0.52
SND1-210ENST00000483503 STOML1Q9UBI4 398 aa11.81□□□□□ -0.52
SND1-210ENST00000483503 BCAP29Q9UHQ4 241 aa11.81□□□□□ -0.52
SND1-210ENST00000483503 FBXO10Q9UK96 956 aa11.81□□□□□ -0.52
SND1-210ENST00000483503 ALPK3Q96L96 1907 aa11.8□□□□□ -0.52
SND1-210ENST00000483503 LOC100653049A0A140TA62 436 aa11.8□□□□□ -0.52
SND1-210ENST00000483503 NPIPB15A6NHN6 443 aaPredicted RBP11.8□□□□□ -0.52
SND1-210ENST00000483503 AGAP14A8MT82 685 aa11.8□□□□□ -0.52
SND1-210ENST00000483503 TMEM233B4DJY2 109 aa11.8□□□□□ -0.52
SND1-210ENST00000483503 RAD51BO15315 384 aa11.8□□□□□ -0.52
SND1-210ENST00000483503 HOXC11O43248 304 aaPredicted RBP11.8□□□□□ -0.52
SND1-210ENST00000483503 BNIP3LO60238 219 aa11.8□□□□□ -0.52
SND1-210ENST00000483503 FKBP6O75344 327 aa11.8□□□□□ -0.52
SND1-210ENST00000483503 KRT34O76011 436 aa11.8□□□□□ -0.52
SND1-210ENST00000483503 CDK14O94921 469 aa11.8□□□□□ -0.52
SND1-210ENST00000483503 PAPLNO95428 1278 aa11.8□□□□□ -0.52
SND1-210ENST00000483503 UGT2B4P06133 528 aa11.8□□□□□ -0.52
SND1-210ENST00000483503 ADH5P11766 374 aa11.8□□□□□ -0.52
SND1-210ENST00000483503 GKP32189 559 aa11.8□□□□□ -0.52
SND1-210ENST00000483503 VIPR1P32241 457 aa11.8□□□□□ -0.52
SND1-210ENST00000483503 PKNOX1P55347 436 aa11.8□□□□□ -0.52
SND1-210ENST00000483503 ERVK-21P61565 698 aa11.8□□□□□ -0.52
SND1-210ENST00000483503 ST8SIA6P61647 398 aa11.8□□□□□ -0.52
SND1-210ENST00000483503 NTHL1P78549 312 aa11.8□□□□□ -0.52
SND1-210ENST00000483503 SLC25A3Q00325 362 aa11.8□□□□□ -0.52
SND1-210ENST00000483503 CAMK1Q14012 370 aa11.8□□□□□ -0.52
SND1-210ENST00000483503 KPNB1Q14974 876 aaKnown RBP11.8□□□□□ -0.52
SND1-210ENST00000483503 PTPRRQ15256 657 aa11.8□□□□□ -0.52
SND1-210ENST00000483503 SWT1Q5T5J6 900 aaKnown RBP11.8□□□□□ -0.52
SND1-210ENST00000483503 WLSQ5T9L3 541 aa11.8□□□□□ -0.52
SND1-210ENST00000483503 LRRC66Q68CR7 880 aa11.8□□□□□ -0.52
SND1-210ENST00000483503 METTL2BQ6P1Q9 378 aaKnown RBP11.8□□□□□ -0.52
SND1-210ENST00000483503 SNX32Q86XE0 403 aa11.8□□□□□ -0.52
SND1-210ENST00000483503 CPNE9Q8IYJ1 553 aa11.8□□□□□ -0.52
SND1-210ENST00000483503 PELI3Q8N2H9 469 aa11.8□□□□□ -0.52
SND1-210ENST00000483503 ZNF483Q8TF39 744 aaPredicted RBP11.8□□□□□ -0.52
SND1-210ENST00000483503 OSCP1Q8WVF1 389 aa11.8□□□□□ -0.52
SND1-210ENST00000483503 JADE3Q92613 823 aa11.8□□□□□ -0.52
SND1-210ENST00000483503 FAM136AQ96C01 138 aa11.8□□□□□ -0.52
SND1-210ENST00000483503 ZNF707Q96C28 371 aaPredicted RBP11.8□□□□□ -0.52
SND1-210ENST00000483503 C19orf60Q96EN9 201 aa11.8□□□□□ -0.52
SND1-210ENST00000483503 COPS8Q99627 209 aa11.8□□□□□ -0.52
SND1-210ENST00000483503 BRD9Q9H8M2 597 aa11.8□□□□□ -0.52
SND1-210ENST00000483503 EBF2Q9HAK2 575 aa11.8□□□□□ -0.52
SND1-210ENST00000483503 MRPL40Q9NQ50 206 aaKnown RBP11.8□□□□□ -0.52
SND1-210ENST00000483503 SPATS2LQ9NUQ6 558 aaKnown RBP11.8□□□□□ -0.52
SND1-210ENST00000483503 DZANK1Q9NVP4 752 aa11.8□□□□□ -0.52
SND1-210ENST00000483503 DUS2Q9NX74 493 aaKnown RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms