RNA–Protein interactions for RNA: ENST00000482902.5

SSR4-209, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-209ENST00000482902 A0A0U1RQF3 1178 aa17.94■□□□□ 0.46
SSR4-209ENST00000482902 SLC26A3P40879 764 aa17.94■□□□□ 0.46
SSR4-209ENST00000482902 RPS9P46781 194 aaKnown RBP17.94■□□□□ 0.46
SSR4-209ENST00000482902 ATP4BP51164 291 aa17.94■□□□□ 0.46
SSR4-209ENST00000482902 FKBP1BP68106 108 aa17.94■□□□□ 0.46
SSR4-209ENST00000482902 BFSP2Q13515 415 aa17.94■□□□□ 0.46
SSR4-209ENST00000482902 MS4A13Q5J8X5 152 aa17.94■□□□□ 0.46
SSR4-209ENST00000482902 TMEM214Q6NUQ4 689 aaKnown RBP17.94■□□□□ 0.46
SSR4-209ENST00000482902 FRA10AC1Q70Z53 315 aa17.94■□□□□ 0.46
SSR4-209ENST00000482902 RYBPQ8N488 228 aaPredicted RBP17.94■□□□□ 0.46
SSR4-209ENST00000482902 HGH1Q9BTY7 390 aa17.94■□□□□ 0.46
SSR4-209ENST00000482902 LHPPQ9H008 270 aa17.94■□□□□ 0.46
SSR4-209ENST00000482902 TMEM248Q9NWD8 314 aa17.94■□□□□ 0.46
SSR4-209ENST00000482902 SCHIP1Q9P0W5 487 aaPredicted RBP17.94■□□□□ 0.46
SSR4-209ENST00000482902 CLDN25C9JDP6 229 aa17.93■□□□□ 0.46
SSR4-209ENST00000482902 KPNA6O60684 536 aa17.93■□□□□ 0.46
SSR4-209ENST00000482902 DUSP11O75319 330 aaKnown RBP17.93■□□□□ 0.46
SSR4-209ENST00000482902 ALDOCP09972 364 aaKnown RBP17.93■□□□□ 0.46
SSR4-209ENST00000482902 TYMPP19971 482 aa17.93■□□□□ 0.46
SSR4-209ENST00000482902 HERVK_113P63132 956 aa17.93■□□□□ 0.46
SSR4-209ENST00000482902 TUBA3CQ13748 450 aa17.93■□□□□ 0.46
SSR4-209ENST00000482902 THOC7Q6I9Y2 204 aaKnown RBP17.93■□□□□ 0.46
SSR4-209ENST00000482902 MON1AQ86VX9 555 aa17.93■□□□□ 0.46
SSR4-209ENST00000482902 TRPV3Q8NET8 790 aa17.93■□□□□ 0.46
SSR4-209ENST00000482902 FATE1Q969F0 183 aa17.93■□□□□ 0.46
SSR4-209ENST00000482902 TBATAQ96M53 351 aa17.93■□□□□ 0.46
SSR4-209ENST00000482902 ADAM2Q99965 735 aa17.93■□□□□ 0.46
SSR4-209ENST00000482902 ERVK-6Q9BXR3 956 aa17.93■□□□□ 0.46
SSR4-209ENST00000482902 AKTIPQ9H8T0 292 aa17.93■□□□□ 0.46
SSR4-209ENST00000482902 MAP10Q9P2G4 905 aa17.93■□□□□ 0.46
SSR4-209ENST00000482902 ST14Q9Y5Y6 855 aa17.93■□□□□ 0.46
SSR4-209ENST00000482902 LDB2O43679 373 aa17.93■□□□□ 0.46
SSR4-209ENST00000482902 ATXN1LP0C7T5 689 aaKnown RBP17.93■□□□□ 0.46
SSR4-209ENST00000482902 SLC2A3P11169 496 aa17.93■□□□□ 0.46
SSR4-209ENST00000482902 HSD17B1P14061 328 aa17.93■□□□□ 0.46
SSR4-209ENST00000482902 S100A1P23297 94 aa17.93■□□□□ 0.46
SSR4-209ENST00000482902 GPR15P49685 360 aa17.93■□□□□ 0.46
SSR4-209ENST00000482902 SH3BP2P78314 561 aa17.93■□□□□ 0.46
SSR4-209ENST00000482902 NFKB2Q00653 900 aa17.93■□□□□ 0.46
SSR4-209ENST00000482902 ZNF846Q147U1 533 aa17.93■□□□□ 0.46
SSR4-209ENST00000482902 DDR2Q16832 855 aa17.93■□□□□ 0.46
SSR4-209ENST00000482902 KIF19Q2TAC6 998 aa17.93■□□□□ 0.46
SSR4-209ENST00000482902 UGT3A2Q3SY77 523 aa17.93■□□□□ 0.46
SSR4-209ENST00000482902 PERM1Q5SV97 790 aa17.93■□□□□ 0.46
SSR4-209ENST00000482902 CLYBLQ8N0X4 340 aa17.93■□□□□ 0.46
SSR4-209ENST00000482902 PGBD5Q8N414 524 aa17.93■□□□□ 0.46
SSR4-209ENST00000482902 PTGR2Q8N8N7 351 aaPredicted RBP17.93■□□□□ 0.46
SSR4-209ENST00000482902 C2orf69Q8N8R5 385 aa17.93■□□□□ 0.46
SSR4-209ENST00000482902 ARRDC2Q8TBH0 407 aa17.93■□□□□ 0.46
SSR4-209ENST00000482902 HPS1Q92902 700 aa17.93■□□□□ 0.46
SSR4-209ENST00000482902 EFHD2Q96C19 240 aaPredicted RBP17.93■□□□□ 0.46
SSR4-209ENST00000482902 UROC1Q96N76 676 aa17.93■□□□□ 0.46
SSR4-209ENST00000482902 ACTR3BQ9P1U1 418 aa17.93■□□□□ 0.46
SSR4-209ENST00000482902 RBMX2Q9Y388 322 aaKnown RBP17.93■□□□□ 0.46
SSR4-209ENST00000482902 PFDN6O15212 129 aa17.92■□□□□ 0.46
SSR4-209ENST00000482902 CD1DP15813 335 aa17.92■□□□□ 0.46
SSR4-209ENST00000482902 GPX3P22352 226 aa17.92■□□□□ 0.46
SSR4-209ENST00000482902 FDXRP22570 491 aa17.92■□□□□ 0.46
SSR4-209ENST00000482902 ELK4P28324 431 aa17.92■□□□□ 0.46
SSR4-209ENST00000482902 RFC2P35250 354 aa17.92■□□□□ 0.46
SSR4-209ENST00000482902 SPCS2Q15005 226 aa17.92■□□□□ 0.46
SSR4-209ENST00000482902 AGAP7PQ5VUJ5 663 aa17.92■□□□□ 0.46
SSR4-209ENST00000482902 TEX26Q8N6G2 289 aa17.92■□□□□ 0.46
SSR4-209ENST00000482902 TRPV1Q8NER1 839 aa17.92■□□□□ 0.46
SSR4-209ENST00000482902 IL1RL2Q9HB29 575 aa17.92■□□□□ 0.46
SSR4-209ENST00000482902 SCML2Q9UQR0 700 aa17.92■□□□□ 0.46
SSR4-209ENST00000482902 DNAJC15Q9Y5T4 150 aa17.92■□□□□ 0.46
SSR4-209ENST00000482902 PPP6CO00743 305 aa17.92■□□□□ 0.46
SSR4-209ENST00000482902 ARPC2O15144 300 aa17.92■□□□□ 0.46
SSR4-209ENST00000482902 SYNCRIPO60506 623 aaKnown RBP17.92■□□□□ 0.46
SSR4-209ENST00000482902 GJB3O75712 270 aa17.92■□□□□ 0.46
SSR4-209ENST00000482902 GFAPP14136 432 aa17.92■□□□□ 0.46
SSR4-209ENST00000482902 YBX1P67809 324 aaKnown RBP17.92■□□□□ 0.46
SSR4-209ENST00000482902 EFEMP1Q12805 493 aa17.92■□□□□ 0.46
SSR4-209ENST00000482902 BNIP2Q12982 314 aa17.92■□□□□ 0.46
SSR4-209ENST00000482902 AQP6Q13520 282 aa17.92■□□□□ 0.46
SSR4-209ENST00000482902 DSC3Q14574 896 aa17.92■□□□□ 0.46
SSR4-209ENST00000482902 PTPRCAPQ14761 206 aa17.92■□□□□ 0.46
SSR4-209ENST00000482902 IL31Q6EBC2 164 aa17.92■□□□□ 0.46
SSR4-209ENST00000482902 MSANTD2Q6P1R3 559 aa17.92■□□□□ 0.46
SSR4-209ENST00000482902 ZNF549Q6P9A3 640 aa17.92■□□□□ 0.46
SSR4-209ENST00000482902 NANOGNBQ7Z5D8 188 aa17.92■□□□□ 0.46
SSR4-209ENST00000482902 MAGEE2Q8TD90 523 aaPredicted RBP17.92■□□□□ 0.46
SSR4-209ENST00000482902 TPK1Q9H3S4 243 aa17.92■□□□□ 0.46
SSR4-209ENST00000482902 POLR3BQ9NW08 1133 aaPredicted RBP17.92■□□□□ 0.46
SSR4-209ENST00000482902 PCDHB8Q9UN66 801 aa17.92■□□□□ 0.46
SSR4-209ENST00000482902 PTGDR2Q9Y5Y4 395 aa17.92■□□□□ 0.46
SSR4-209ENST00000482902 A0A0J9YYE9 177 aa17.91■□□□□ 0.46
SSR4-209ENST00000482902 LOC285095A0A1B0GVY8 99 aa17.91■□□□□ 0.46
SSR4-209ENST00000482902 FXYD1O00168 92 aa17.91■□□□□ 0.46
SSR4-209ENST00000482902 NR5A2O00482 541 aa17.91■□□□□ 0.46
SSR4-209ENST00000482902 CELF2O95319 508 aaKnown RBP17.91■□□□□ 0.46
SSR4-209ENST00000482902 SIX3O95343 332 aaPredicted RBP17.91■□□□□ 0.46
SSR4-209ENST00000482902 GLP2RO95838 553 aa17.91■□□□□ 0.46
SSR4-209ENST00000482902 GOT2P00505 430 aaKnown RBP17.91■□□□□ 0.46
SSR4-209ENST00000482902 PAX3P23760 479 aa17.91■□□□□ 0.46
SSR4-209ENST00000482902 EEF1B2P24534 225 aaKnown RBP17.91■□□□□ 0.46
SSR4-209ENST00000482902 GSSP48637 474 aa17.91■□□□□ 0.46
SSR4-209ENST00000482902 TAF1CQ15572 869 aaPredicted RBP17.91■□□□□ 0.46
SSR4-209ENST00000482902 GEN1Q17RS7 908 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms