RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 WDR74Q6RFH5 385 aaPredicted RBP15.06■□□□□ 0
LIMS3-203ENST00000480744 VSIG1Q86XK7 387 aa15.06■□□□□ 0
LIMS3-203ENST00000480744 RHOT1Q8IXI2 618 aa15.06■□□□□ 0
LIMS3-203ENST00000480744 CACNA2D3Q8IZS8 1091 aa15.06■□□□□ 0
LIMS3-203ENST00000480744 TRAM1L1Q8N609 369 aa15.06■□□□□ 0
LIMS3-203ENST00000480744 HTR3CQ8WXA8 447 aa15.06■□□□□ 0
LIMS3-203ENST00000480744 TBC1D10AQ9BXI6 508 aa15.06■□□□□ 0
LIMS3-203ENST00000480744 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.06■□□□□ 0
LIMS3-203ENST00000480744 GLOD4Q9HC38 313 aa15.06■□□□□ 0
LIMS3-203ENST00000480744 MAGEE1Q9HCI5 957 aa15.06■□□□□ 0
LIMS3-203ENST00000480744 TRIM39Q9HCM9 518 aa15.06■□□□□ 0
LIMS3-203ENST00000480744 RAD18Q9NS91 495 aa15.06■□□□□ 0
LIMS3-203ENST00000480744 DDX56Q9NY93 547 aaKnown RBP15.06■□□□□ 0
LIMS3-203ENST00000480744 UBP1Q9NZI7 540 aa15.06■□□□□ 0
LIMS3-203ENST00000480744 CPNE7Q9UBL6 633 aa15.06■□□□□ 0
LIMS3-203ENST00000480744 A0A0A6YYK5 440 aaPredicted RBP15.05■□□□□ -0
LIMS3-203ENST00000480744 A6NCN8 305 aa15.05■□□□□ -0
LIMS3-203ENST00000480744 OR5K4A6NMS3 321 aa15.05■□□□□ -0
LIMS3-203ENST00000480744 RAD1O60671 282 aa15.05■□□□□ -0
LIMS3-203ENST00000480744 MTX2O75431 263 aa15.05■□□□□ -0
LIMS3-203ENST00000480744 LIFP15018 202 aa15.05■□□□□ -0
LIMS3-203ENST00000480744 COMTP21964 271 aa15.05■□□□□ -0
LIMS3-203ENST00000480744 EPHA4P54764 986 aa15.05■□□□□ -0
LIMS3-203ENST00000480744 RAB15P59190 212 aa15.05■□□□□ -0
LIMS3-203ENST00000480744 DCDC1P59894 354 aa15.05■□□□□ -0
LIMS3-203ENST00000480744 SEPT7Q16181 437 aaKnown RBP15.05■□□□□ -0
LIMS3-203ENST00000480744 LRRC38Q5VT99 294 aa15.05■□□□□ -0
LIMS3-203ENST00000480744 KAZNQ674X7 775 aa15.05■□□□□ -0
LIMS3-203ENST00000480744 MFSD7Q6UXD7 560 aa15.05■□□□□ -0
LIMS3-203ENST00000480744 TMC3Q7Z5M5 1100 aa15.05■□□□□ -0
LIMS3-203ENST00000480744 ADGRG6Q86SQ4 1221 aa15.05■□□□□ -0
LIMS3-203ENST00000480744 GAS2L3Q86XJ1 694 aa15.05■□□□□ -0
LIMS3-203ENST00000480744 TRIM48Q8IWZ4 208 aa15.05■□□□□ -0
LIMS3-203ENST00000480744 GLYATL1Q969I3 302 aa15.05■□□□□ -0
LIMS3-203ENST00000480744 PDP2Q9P2J9 529 aa15.05■□□□□ -0
LIMS3-203ENST00000480744 SAE1Q9UBE0 346 aaPredicted RBP15.05■□□□□ -0
LIMS3-203ENST00000480744 DNAJC16Q9Y2G8 782 aa15.05■□□□□ -0
LIMS3-203ENST00000480744 PDZK1P1A8MUH7 402 aa15.04■□□□□ -0
LIMS3-203ENST00000480744 F5H423 210 aaPredicted RBP15.04■□□□□ -0
LIMS3-203ENST00000480744 NDST3O95803 873 aa15.04■□□□□ -0
LIMS3-203ENST00000480744 BPIP17213 487 aa15.04■□□□□ -0
LIMS3-203ENST00000480744 PTPN3P26045 913 aa15.04■□□□□ -0
LIMS3-203ENST00000480744 SLC1A1P43005 524 aa15.04■□□□□ -0
LIMS3-203ENST00000480744 NFKB2Q00653 900 aa15.04■□□□□ -0
LIMS3-203ENST00000480744 TEX44Q53QW1 395 aa15.04■□□□□ -0
LIMS3-203ENST00000480744 PDPK2PQ6A1A2 396 aa15.04■□□□□ -0
LIMS3-203ENST00000480744 XKR5Q6UX68 686 aa15.04■□□□□ -0
LIMS3-203ENST00000480744 ARHGAP22Q7Z5H3 698 aa15.04■□□□□ -0
LIMS3-203ENST00000480744 LRRTM4Q86VH4 590 aa15.04■□□□□ -0
LIMS3-203ENST00000480744 BMPERQ8N8U9 685 aa15.04■□□□□ -0
LIMS3-203ENST00000480744 AVL9Q8NBF6 648 aa15.04■□□□□ -0
LIMS3-203ENST00000480744 PLEKHG4BQ96PX9 1271 aa15.04■□□□□ -0
LIMS3-203ENST00000480744 TEFMQ96QE5 360 aaKnown RBP15.04■□□□□ -0
LIMS3-203ENST00000480744 BPIFA1Q9NP55 256 aa15.04■□□□□ -0
LIMS3-203ENST00000480744 SLC23A2Q9UGH3 650 aa15.04■□□□□ -0
LIMS3-203ENST00000480744 SPO11Q9Y5K1 396 aa15.04■□□□□ -0
LIMS3-203ENST00000480744 ADGRG1Q9Y653 693 aa15.04■□□□□ -0
LIMS3-203ENST00000480744 SETXQ7Z333 2677 aaKnown RBP15.04■□□□□ -0
LIMS3-203ENST00000480744 GPR89AB7ZAQ6 455 aa15.03■□□□□ -0
LIMS3-203ENST00000480744 AURKAO14965 403 aa15.03■□□□□ -0
LIMS3-203ENST00000480744 KMOO15229 486 aa15.03■□□□□ -0
LIMS3-203ENST00000480744 CST8O60676 142 aa15.03■□□□□ -0
LIMS3-203ENST00000480744 VIPP01282 170 aa15.03■□□□□ -0
LIMS3-203ENST00000480744 GPR89BP0CG08 455 aa15.03■□□□□ -0
LIMS3-203ENST00000480744 ZNF7P17097 686 aaPredicted RBP15.03■□□□□ -0
LIMS3-203ENST00000480744 TNNT3P45378 269 aaPredicted RBP15.03■□□□□ -0
LIMS3-203ENST00000480744 MC2RQ01718 297 aa15.03■□□□□ -0
LIMS3-203ENST00000480744 TFDP2Q14188 446 aa15.03■□□□□ -0
LIMS3-203ENST00000480744 PRKD1Q15139 912 aaPredicted RBP15.03■□□□□ -0
LIMS3-203ENST00000480744 SLC14A2Q15849 920 aa15.03■□□□□ -0
LIMS3-203ENST00000480744 CEACAM20Q6UY09 585 aa15.03■□□□□ -0
LIMS3-203ENST00000480744 BZW1Q7L1Q6 419 aaKnown RBP15.03■□□□□ -0
LIMS3-203ENST00000480744 CNGA4Q8IV77 575 aa15.03■□□□□ -0
LIMS3-203ENST00000480744 GDAP1Q8TB36 358 aa15.03■□□□□ -0
LIMS3-203ENST00000480744 TFB1MQ8WVM0 346 aaKnown RBP15.03■□□□□ -0
LIMS3-203ENST00000480744 TADA1Q96BN2 335 aa15.03■□□□□ -0
LIMS3-203ENST00000480744 RTP4Q96DX8 246 aa15.03■□□□□ -0
LIMS3-203ENST00000480744 TEKT5Q96M29 485 aa15.03■□□□□ -0
LIMS3-203ENST00000480744 SLC12A9Q9BXP2 914 aa15.03■□□□□ -0
LIMS3-203ENST00000480744 RBSNQ9H1K0 784 aa15.03■□□□□ -0
LIMS3-203ENST00000480744 APMAPQ9HDC9 416 aa15.03■□□□□ -0
LIMS3-203ENST00000480744 SCHIP1Q9P0W5 487 aaPredicted RBP15.03■□□□□ -0
LIMS3-203ENST00000480744 NFKBIL1Q9UBC1 381 aaPredicted RBP15.03■□□□□ -0
LIMS3-203ENST00000480744 LILRA5A6NI73 299 aa15.02■□□□□ -0
LIMS3-203ENST00000480744 CHUKO15111 745 aa15.02■□□□□ -0
LIMS3-203ENST00000480744 CDK14O94921 469 aa15.02■□□□□ -0
LIMS3-203ENST00000480744 SFTPCP11686 197 aa15.02■□□□□ -0
LIMS3-203ENST00000480744 PECAM1P16284 738 aaPredicted RBP15.02■□□□□ -0
LIMS3-203ENST00000480744 TYRP1P17643 537 aa15.02■□□□□ -0
LIMS3-203ENST00000480744 NFKB1P19838 968 aa15.02■□□□□ -0
LIMS3-203ENST00000480744 CDKN2BP42772 138 aa15.02■□□□□ -0
LIMS3-203ENST00000480744 NR2C2P49116 596 aa15.02■□□□□ -0
LIMS3-203ENST00000480744 CLCNKAP51800 687 aa15.02■□□□□ -0
LIMS3-203ENST00000480744 GFERP55789 205 aa15.02■□□□□ -0
LIMS3-203ENST00000480744 UBE2IP63279 158 aaKnown RBP15.02■□□□□ -0
LIMS3-203ENST00000480744 GTF2H3Q13889 308 aa15.02■□□□□ -0
LIMS3-203ENST00000480744 CLCA4Q14CN2 919 aa15.02■□□□□ -0
LIMS3-203ENST00000480744 NOMO1Q15155 1222 aa15.02■□□□□ -0
LIMS3-203ENST00000480744 SPOCD1Q6ZMY3 1216 aa15.02■□□□□ -0
LIMS3-203ENST00000480744 TMEM26Q6ZUK4 368 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms