RNA–Protein interactions for RNA: ENST00000480003.5

CD46-214, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CD46, Length 1,258 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-214ENST00000480003 Q6ZSR6 202 aa9.5□□□□□ -0.89
CD46-214ENST00000480003 TRMT10CQ7L0Y3 403 aaKnown RBP9.5□□□□□ -0.89
CD46-214ENST00000480003 ARMCX6Q7L4S7 300 aa9.5□□□□□ -0.89
CD46-214ENST00000480003 PTAR1Q7Z6K3 402 aaPredicted RBP9.5□□□□□ -0.89
CD46-214ENST00000480003 CNTN4Q8IWV2 1026 aa9.5□□□□□ -0.89
CD46-214ENST00000480003 LMNTD2Q8IXW0 634 aa9.5□□□□□ -0.89
CD46-214ENST00000480003 GSPT2Q8IYD1 628 aaKnown RBP9.5□□□□□ -0.89
CD46-214ENST00000480003 PNPLA1Q8N8W4 532 aa9.5□□□□□ -0.89
CD46-214ENST00000480003 OR13H1Q8NG92 308 aa9.5□□□□□ -0.89
CD46-214ENST00000480003 GSDMBQ8TAX9 411 aa9.5□□□□□ -0.89
CD46-214ENST00000480003 SCG3Q8WXD2 468 aaKnown RBP9.5□□□□□ -0.89
CD46-214ENST00000480003 SNX19Q92543 992 aa9.5□□□□□ -0.89
CD46-214ENST00000480003 CFAP36Q96G28 342 aa9.5□□□□□ -0.89
CD46-214ENST00000480003 KLHDC7BQ96G42 594 aa9.5□□□□□ -0.89
CD46-214ENST00000480003 HIC2Q96JB3 615 aa9.5□□□□□ -0.89
CD46-214ENST00000480003 SLC6A18Q96N87 628 aa9.5□□□□□ -0.89
CD46-214ENST00000480003 TCF12Q99081 682 aa9.5□□□□□ -0.89
CD46-214ENST00000480003 MYOCQ99972 504 aa9.5□□□□□ -0.89
CD46-214ENST00000480003 EPB41L4BQ9H329 900 aa9.5□□□□□ -0.89
CD46-214ENST00000480003 CDC42EP4Q9H3Q1 356 aaKnown RBP9.5□□□□□ -0.89
CD46-214ENST00000480003 TRIM39Q9HCM9 518 aa9.5□□□□□ -0.89
CD46-214ENST00000480003 SMYD2Q9NRG4 433 aa9.5□□□□□ -0.89
CD46-214ENST00000480003 MARCH4Q9P2E8 410 aaPredicted RBP9.5□□□□□ -0.89
CD46-214ENST00000480003 FNDC3AQ9Y2H6 1198 aaKnown RBP9.5□□□□□ -0.89
CD46-214ENST00000480003 PCDHGA5Q9Y5G8 931 aa9.5□□□□□ -0.89
CD46-214ENST00000480003 OAS3Q9Y6K5 1087 aaKnown RBP9.5□□□□□ -0.89
CD46-214ENST00000480003 GPR179Q6PRD1 2367 aa9.5□□□□□ -0.89
CD46-214ENST00000480003 CEP192Q8TEP8 1941 aa9.49□□□□□ -0.89
CD46-214ENST00000480003 SPTY2D1-AS1A0A0U1RR47 76 aa9.49□□□□□ -0.89
CD46-214ENST00000480003 A0A1B0GTW7 788 aa9.49□□□□□ -0.89
CD46-214ENST00000480003 TMEM202A6NGA9 273 aa9.49□□□□□ -0.89
CD46-214ENST00000480003 FAM159BA6NKW6 160 aa9.49□□□□□ -0.89
CD46-214ENST00000480003 A6NNZ2 444 aa9.49□□□□□ -0.89
CD46-214ENST00000480003 GOLGA8KD6RF30 607 aa9.49□□□□□ -0.89
CD46-214ENST00000480003 GOLGA8TH3BQL2 631 aa9.49□□□□□ -0.89
CD46-214ENST00000480003 TLR4O00206 839 aa9.49□□□□□ -0.89
CD46-214ENST00000480003 TNFRSF10CO14798 259 aa9.49□□□□□ -0.89
CD46-214ENST00000480003 GPR39O43194 453 aa9.49□□□□□ -0.89
CD46-214ENST00000480003 SPAG6O75602 509 aa9.49□□□□□ -0.89
CD46-214ENST00000480003 EPN2O95208 641 aa9.49□□□□□ -0.89
CD46-214ENST00000480003 SLC25A14O95258 325 aaPredicted RBP9.49□□□□□ -0.89
CD46-214ENST00000480003 CEACAM5P06731 702 aa9.49□□□□□ -0.89
CD46-214ENST00000480003 THEGLP0DJG4 465 aa9.49□□□□□ -0.89
CD46-214ENST00000480003 ERVK-10P10266 1014 aa9.49□□□□□ -0.89
CD46-214ENST00000480003 ITGALP20701 1170 aa9.49□□□□□ -0.89
CD46-214ENST00000480003 ACRV1P26436 265 aa9.49□□□□□ -0.89
CD46-214ENST00000480003 GABRB3P28472 473 aa9.49□□□□□ -0.89
CD46-214ENST00000480003 RABIFP47224 123 aa9.49□□□□□ -0.89
CD46-214ENST00000480003 LEPRP48357 1165 aaKnown RBP9.49□□□□□ -0.89
CD46-214ENST00000480003 CSNK1EP49674 416 aaKnown RBP9.49□□□□□ -0.89
CD46-214ENST00000480003 KIAA1024LP59773 190 aa9.49□□□□□ -0.89
CD46-214ENST00000480003 BNC1Q01954 994 aa9.49□□□□□ -0.89
CD46-214ENST00000480003 TMEM115Q12893 351 aaPredicted RBP9.49□□□□□ -0.89
CD46-214ENST00000480003 DUOXA1Q1HG43 343 aa9.49□□□□□ -0.89
CD46-214ENST00000480003 TYSND1Q2T9J0 566 aa9.49□□□□□ -0.89
CD46-214ENST00000480003 KHDC1Q4VXA5 237 aaKnown RBP9.49□□□□□ -0.89
CD46-214ENST00000480003 FASTKD1Q53R41 847 aaKnown RBP9.49□□□□□ -0.89
CD46-214ENST00000480003 HSP90AA5PQ58FG0 334 aa9.49□□□□□ -0.89
CD46-214ENST00000480003 ZRANB3Q5FWF4 1079 aa9.49□□□□□ -0.89
CD46-214ENST00000480003 LYPLAL1Q5VWZ2 237 aa9.49□□□□□ -0.89
CD46-214ENST00000480003 EMBQ6PCB8 327 aa9.49□□□□□ -0.89
CD46-214ENST00000480003 SLC23A3Q6PIS1 610 aa9.49□□□□□ -0.89
CD46-214ENST00000480003 CERS6Q6ZMG9 384 aa9.49□□□□□ -0.89
CD46-214ENST00000480003 PRR23BQ6ZRT6 265 aa9.49□□□□□ -0.89
CD46-214ENST00000480003 GALNT7Q86SF2 657 aa9.49□□□□□ -0.89
CD46-214ENST00000480003 ADGRG6Q86SQ4 1221 aa9.49□□□□□ -0.89
CD46-214ENST00000480003 KCNMB4Q86W47 210 aa9.49□□□□□ -0.89
CD46-214ENST00000480003 SERPINA9Q86WD7 417 aa9.49□□□□□ -0.89
CD46-214ENST00000480003 HEATR4Q86WZ0 1026 aa9.49□□□□□ -0.89
CD46-214ENST00000480003 SPATS2Q86XZ4 545 aaKnown RBP9.49□□□□□ -0.89
CD46-214ENST00000480003 CILP2Q8IUL8 1156 aa9.49□□□□□ -0.89
CD46-214ENST00000480003 SLC22A18ASQ8N1D0 253 aa9.49□□□□□ -0.89
CD46-214ENST00000480003 NXPE1Q8N323 547 aa9.49□□□□□ -0.89
CD46-214ENST00000480003 C2CD4AQ8NCU7 369 aaPredicted RBP9.49□□□□□ -0.89
CD46-214ENST00000480003 DDHD1Q8NEL9 900 aa9.49□□□□□ -0.89
CD46-214ENST00000480003 CALML6Q8TD86 181 aa9.49□□□□□ -0.89
CD46-214ENST00000480003 PIGKQ92643 395 aa9.49□□□□□ -0.89
CD46-214ENST00000480003 CAVIN3Q969G5 261 aa9.49□□□□□ -0.89
CD46-214ENST00000480003 ULK4Q96C45 1275 aa9.49□□□□□ -0.89
CD46-214ENST00000480003 CERS2Q96G23 380 aa9.49□□□□□ -0.89
CD46-214ENST00000480003 TTC25Q96NG3 672 aa9.49□□□□□ -0.89
CD46-214ENST00000480003 MIR1-1HGQ9H1L0 117 aa9.49□□□□□ -0.89
CD46-214ENST00000480003 WDR26Q9H7D7 661 aa9.49□□□□□ -0.89
CD46-214ENST00000480003 AASDHPPTQ9NRN7 309 aa9.49□□□□□ -0.89
CD46-214ENST00000480003 PHPT1Q9NRX4 125 aaPredicted RBP9.49□□□□□ -0.89
CD46-214ENST00000480003 CATSPERZQ9NTU4 200 aa9.49□□□□□ -0.89
CD46-214ENST00000480003 C20orf96Q9NUD7 363 aaPredicted RBP9.49□□□□□ -0.89
CD46-214ENST00000480003 FAM86C1Q9NVL1 165 aa9.49□□□□□ -0.89
CD46-214ENST00000480003 ZDHHC3Q9NYG2 299 aa9.49□□□□□ -0.89
CD46-214ENST00000480003 IL1RAPL1Q9NZN1 696 aa9.49□□□□□ -0.89
CD46-214ENST00000480003 PNMA8BQ9ULN7 279 aaPredicted RBP9.49□□□□□ -0.89
CD46-214ENST00000480003 OR1A2Q9Y585 309 aa9.49□□□□□ -0.89
CD46-214ENST00000480003 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.49□□□□□ -0.89
CD46-214ENST00000480003 MYLKQ15746 1914 aa9.48□□□□□ -0.89
CD46-214ENST00000480003 TCRBV9S1A1TA0A576 114 aa9.48□□□□□ -0.89
CD46-214ENST00000480003 CXorf49A8MYA2 514 aaPredicted RBP9.48□□□□□ -0.89
CD46-214ENST00000480003 PROB1E7EW31 1015 aa9.48□□□□□ -0.89
CD46-214ENST00000480003 CHUKO15111 745 aa9.48□□□□□ -0.89
CD46-214ENST00000480003 INPP4BO15327 924 aa9.48□□□□□ -0.89
CD46-214ENST00000480003 RIPK2O43353 540 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms