RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 ADGRG6Q86SQ4 1221 aa10.71□□□□□ -0.69
ATG4B-219ENST00000479941 CAND1Q86VP6 1230 aaKnown RBP10.71□□□□□ -0.69
ATG4B-219ENST00000479941 OR13J1Q8NGT2 312 aa10.71□□□□□ -0.69
ATG4B-219ENST00000479941 GPBAR1Q8TDU6 330 aa10.71□□□□□ -0.69
ATG4B-219ENST00000479941 HEXDCQ8WVB3 486 aa10.71□□□□□ -0.69
ATG4B-219ENST00000479941 GLMNQ92990 594 aa10.71□□□□□ -0.69
ATG4B-219ENST00000479941 CNDP2Q96KP4 475 aaKnown RBP10.71□□□□□ -0.69
ATG4B-219ENST00000479941 OR2M4Q96R27 311 aa10.71□□□□□ -0.69
ATG4B-219ENST00000479941 KIFC1Q9BW19 673 aa10.71□□□□□ -0.69
ATG4B-219ENST00000479941 MRM3Q9HC36 420 aaKnown RBP10.71□□□□□ -0.69
ATG4B-219ENST00000479941 ARFGAP3Q9NP61 516 aa10.71□□□□□ -0.69
ATG4B-219ENST00000479941 CHRAC1Q9NRG0 131 aa10.71□□□□□ -0.69
ATG4B-219ENST00000479941 ZNHIT2Q9UHR6 403 aa10.71□□□□□ -0.69
ATG4B-219ENST00000479941 GPSM3Q9Y4H4 160 aa10.71□□□□□ -0.69
ATG4B-219ENST00000479941 SPEGQ15772 3267 aa10.71□□□□□ -0.7
ATG4B-219ENST00000479941 LRP4O75096 1905 aa10.7□□□□□ -0.7
ATG4B-219ENST00000479941 TRBV5-4A0A0C4DH59 114 aa10.7□□□□□ -0.7
ATG4B-219ENST00000479941 CCDC78A2IDD5 438 aa10.7□□□□□ -0.7
ATG4B-219ENST00000479941 SDR42E2A6NKP2 422 aa10.7□□□□□ -0.7
ATG4B-219ENST00000479941 EFCAB8A8MWE9 144 aa10.7□□□□□ -0.7
ATG4B-219ENST00000479941 CFAP99D6REC4 459 aa10.7□□□□□ -0.7
ATG4B-219ENST00000479941 GOLGA8MH3BSY2 632 aa10.7□□□□□ -0.7
ATG4B-219ENST00000479941 CCL22O00626 93 aa10.7□□□□□ -0.7
ATG4B-219ENST00000479941 GPR39O43194 453 aa10.7□□□□□ -0.7
ATG4B-219ENST00000479941 AVILO75366 819 aa10.7□□□□□ -0.7
ATG4B-219ENST00000479941 MTX2O75431 263 aa10.7□□□□□ -0.7
ATG4B-219ENST00000479941 CELA2BP08218 269 aaPredicted RBP10.7□□□□□ -0.7
ATG4B-219ENST00000479941 RALBP11234 206 aa10.7□□□□□ -0.7
ATG4B-219ENST00000479941 CKMT2P17540 419 aa10.7□□□□□ -0.7
ATG4B-219ENST00000479941 MSH3P20585 1137 aa10.7□□□□□ -0.7
ATG4B-219ENST00000479941 DUSP3P51452 185 aaPredicted RBP10.7□□□□□ -0.7
ATG4B-219ENST00000479941 CTBSQ01459 385 aa10.7□□□□□ -0.7
ATG4B-219ENST00000479941 CACNG1Q06432 222 aa10.7□□□□□ -0.7
ATG4B-219ENST00000479941 C2orf54Q08AI8 447 aa10.7□□□□□ -0.7
ATG4B-219ENST00000479941 MORF4L2Q15014 288 aa10.7□□□□□ -0.7
ATG4B-219ENST00000479941 PROX2Q3B8N5 592 aa10.7□□□□□ -0.7
ATG4B-219ENST00000479941 ZRANB3Q5FWF4 1079 aa10.7□□□□□ -0.7
ATG4B-219ENST00000479941 PPM1JQ5JR12 505 aa10.7□□□□□ -0.7
ATG4B-219ENST00000479941 C6orf132Q5T0Z8 1188 aa10.7□□□□□ -0.7
ATG4B-219ENST00000479941 IZUMO3Q5VZ72 239 aa10.7□□□□□ -0.7
ATG4B-219ENST00000479941 CHST15Q7LFX5 561 aaPredicted RBP10.7□□□□□ -0.7
ATG4B-219ENST00000479941 LRRTM4Q86VH4 590 aa10.7□□□□□ -0.7
ATG4B-219ENST00000479941 NXPE1Q8N323 547 aa10.7□□□□□ -0.7
ATG4B-219ENST00000479941 HDAC10Q969S8 669 aa10.7□□□□□ -0.7
ATG4B-219ENST00000479941 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.7□□□□□ -0.7
ATG4B-219ENST00000479941 SGSM3Q96HU1 749 aa10.7□□□□□ -0.7
ATG4B-219ENST00000479941 ZNF514Q96K75 400 aaPredicted RBP10.7□□□□□ -0.7
ATG4B-219ENST00000479941 APOLD1Q96LR9 279 aa10.7□□□□□ -0.7
ATG4B-219ENST00000479941 ZNF778Q96MU6 729 aa10.7□□□□□ -0.7
ATG4B-219ENST00000479941 COPS8Q99627 209 aa10.7□□□□□ -0.7
ATG4B-219ENST00000479941 TRIM51Q9BSJ1 452 aa10.7□□□□□ -0.7
ATG4B-219ENST00000479941 BOCQ9BWV1 1114 aa10.7□□□□□ -0.7
ATG4B-219ENST00000479941 SUDS3Q9H7L9 328 aaPredicted RBP10.7□□□□□ -0.7
ATG4B-219ENST00000479941 TREX1Q9NSU2 369 aa10.7□□□□□ -0.7
ATG4B-219ENST00000479941 EVA1BQ9NVM1 165 aa10.7□□□□□ -0.7
ATG4B-219ENST00000479941 SYBUQ9NX95 663 aa10.7□□□□□ -0.7
ATG4B-219ENST00000479941 SAMD15Q9P1V8 674 aa10.7□□□□□ -0.7
ATG4B-219ENST00000479941 SOX13Q9UN79 622 aa10.7□□□□□ -0.7
ATG4B-219ENST00000479941 GPR34Q9UPC5 381 aa10.7□□□□□ -0.7
ATG4B-219ENST00000479941 MRFAP1Q9Y605 127 aa10.7□□□□□ -0.7
ATG4B-219ENST00000479941 COL5A1P20908 1838 aaPredicted RBP10.7□□□□□ -0.7
ATG4B-219ENST00000479941 CCDC162PA2VCL2 907 aa10.69□□□□□ -0.7
ATG4B-219ENST00000479941 GIPC1O14908 333 aa10.69□□□□□ -0.7
ATG4B-219ENST00000479941 KMOO15229 486 aa10.69□□□□□ -0.7
ATG4B-219ENST00000479941 RAD51CO43502 376 aa10.69□□□□□ -0.7
ATG4B-219ENST00000479941 SEC31AO94979 1220 aaKnown RBP10.69□□□□□ -0.7
ATG4B-219ENST00000479941 CKMT1AP12532 417 aa10.69□□□□□ -0.7
ATG4B-219ENST00000479941 ACRV1P26436 265 aa10.69□□□□□ -0.7
ATG4B-219ENST00000479941 AKT1P31749 480 aa10.69□□□□□ -0.7
ATG4B-219ENST00000479941 CA5AP35218 305 aa10.69□□□□□ -0.7
ATG4B-219ENST00000479941 ACTR1BP42025 376 aa10.69□□□□□ -0.7
ATG4B-219ENST00000479941 MAGEA3P43357 314 aa10.69□□□□□ -0.7
ATG4B-219ENST00000479941 RPIAP49247 311 aa10.69□□□□□ -0.7
ATG4B-219ENST00000479941 ARSDP51689 593 aa10.69□□□□□ -0.7
ATG4B-219ENST00000479941 CLCNKAP51800 687 aa10.69□□□□□ -0.7
ATG4B-219ENST00000479941 ACTR1AP61163 376 aa10.69□□□□□ -0.7
ATG4B-219ENST00000479941 PRAMEP78395 509 aa10.69□□□□□ -0.7
ATG4B-219ENST00000479941 CRADDP78560 199 aa10.69□□□□□ -0.7
ATG4B-219ENST00000479941 SIM1P81133 766 aaPredicted RBP10.69□□□□□ -0.7
ATG4B-219ENST00000479941 DAB2P98082 770 aa10.69□□□□□ -0.7
ATG4B-219ENST00000479941 TCEA2Q15560 299 aa10.69□□□□□ -0.7
ATG4B-219ENST00000479941 KHDC1Q4VXA5 237 aaKnown RBP10.69□□□□□ -0.7
ATG4B-219ENST00000479941 ZNF648Q5T619 568 aaPredicted RBP10.69□□□□□ -0.7
ATG4B-219ENST00000479941 HIBCHQ6NVY1 386 aaPredicted RBP10.69□□□□□ -0.7
ATG4B-219ENST00000479941 CASC4Q6P4E1 433 aa10.69□□□□□ -0.7
ATG4B-219ENST00000479941 OGFOD3Q6PK18 319 aa10.69□□□□□ -0.7
ATG4B-219ENST00000479941 AFTPHQ6ULP2 937 aa10.69□□□□□ -0.7
ATG4B-219ENST00000479941 TAS2R42Q7RTR8 314 aa10.69□□□□□ -0.7
ATG4B-219ENST00000479941 SERPINA9Q86WD7 417 aa10.69□□□□□ -0.7
ATG4B-219ENST00000479941 NRROSQ86YC3 692 aa10.69□□□□□ -0.7
ATG4B-219ENST00000479941 ARL10Q8N8L6 244 aa10.69□□□□□ -0.7
ATG4B-219ENST00000479941 BBOF1Q8ND07 529 aa10.69□□□□□ -0.7
ATG4B-219ENST00000479941 MNS1Q8NEH6 495 aa10.69□□□□□ -0.7
ATG4B-219ENST00000479941 FAM46DQ8NEK8 389 aa10.69□□□□□ -0.7
ATG4B-219ENST00000479941 OR6P1Q8NGX9 317 aa10.69□□□□□ -0.7
ATG4B-219ENST00000479941 OR4L1Q8NH43 312 aa10.69□□□□□ -0.7
ATG4B-219ENST00000479941 CCL4L1Q8NHW4 92 aa10.69□□□□□ -0.7
ATG4B-219ENST00000479941 DCUN1D1Q96GG9 259 aa10.69□□□□□ -0.7
ATG4B-219ENST00000479941 SNF8Q96H20 258 aa10.69□□□□□ -0.7
ATG4B-219ENST00000479941 TTC1Q99614 292 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms