RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 VEGFDO43915 354 aa12.41□□□□□ -0.42
TRAPPC12-218ENST00000479897 MAGEC1O60732 1142 aa12.41□□□□□ -0.42
TRAPPC12-218ENST00000479897 AP2A2O94973 939 aa12.41□□□□□ -0.42
TRAPPC12-218ENST00000479897 SLC25A14O95258 325 aaPredicted RBP12.41□□□□□ -0.42
TRAPPC12-218ENST00000479897 IVLP07476 585 aa12.41□□□□□ -0.42
TRAPPC12-218ENST00000479897 RALBP11234 206 aa12.41□□□□□ -0.42
TRAPPC12-218ENST00000479897 ZNF7P17097 686 aaPredicted RBP12.41□□□□□ -0.42
TRAPPC12-218ENST00000479897 KELP23276 732 aa12.41□□□□□ -0.42
TRAPPC12-218ENST00000479897 GABRB3P28472 473 aa12.41□□□□□ -0.42
TRAPPC12-218ENST00000479897 CD38P28907 300 aa12.41□□□□□ -0.42
TRAPPC12-218ENST00000479897 PMLP29590 882 aa12.41□□□□□ -0.42
TRAPPC12-218ENST00000479897 GP5P40197 560 aa12.41□□□□□ -0.42
TRAPPC12-218ENST00000479897 CD151P48509 253 aa12.41□□□□□ -0.42
TRAPPC12-218ENST00000479897 EIF3BP55884 814 aaKnown RBP12.41□□□□□ -0.42
TRAPPC12-218ENST00000479897 CLDN2P57739 230 aa12.41□□□□□ -0.42
TRAPPC12-218ENST00000479897 MPP1Q00013 466 aa12.41□□□□□ -0.42
TRAPPC12-218ENST00000479897 B4GALNT1Q00973 533 aa12.41□□□□□ -0.42
TRAPPC12-218ENST00000479897 CTBP1Q13363 440 aa12.41□□□□□ -0.42
TRAPPC12-218ENST00000479897 SIM2Q14190 667 aaPredicted RBP12.41□□□□□ -0.42
TRAPPC12-218ENST00000479897 EFTUD2Q15029 972 aaKnown RBP eCLIP12.41□□□□□ -0.422e-8■■■□□ 18.5
TRAPPC12-218ENST00000479897 SMAD1Q15797 465 aaKnown RBP12.41□□□□□ -0.42
TRAPPC12-218ENST00000479897 MACC1Q6ZN28 852 aa12.41□□□□□ -0.42
TRAPPC12-218ENST00000479897 TDRPQ86YL5 185 aa12.41□□□□□ -0.42
TRAPPC12-218ENST00000479897 CTAGE3PQ8IX95 158 aa12.41□□□□□ -0.42
TRAPPC12-218ENST00000479897 ANKRD7Q92527 254 aa12.41□□□□□ -0.42
TRAPPC12-218ENST00000479897 SCARF2Q96GP6 870 aaPredicted RBP12.41□□□□□ -0.42
TRAPPC12-218ENST00000479897 LOXL4Q96JB6 756 aa12.41□□□□□ -0.42
TRAPPC12-218ENST00000479897 PAFAH2Q99487 392 aa12.41□□□□□ -0.42
TRAPPC12-218ENST00000479897 RBBP8Q99708 897 aa12.41□□□□□ -0.42
TRAPPC12-218ENST00000479897 CCDC77Q9BR77 488 aa12.41□□□□□ -0.42
TRAPPC12-218ENST00000479897 TMEM109Q9BVC6 243 aa12.41□□□□□ -0.42
TRAPPC12-218ENST00000479897 P2RY12Q9H244 342 aa12.41□□□□□ -0.42
TRAPPC12-218ENST00000479897 RHOJQ9H4E5 214 aa12.41□□□□□ -0.42
TRAPPC12-218ENST00000479897 FAM96AQ9H5X1 160 aa12.41□□□□□ -0.42
TRAPPC12-218ENST00000479897 RMI1Q9H9A7 625 aa12.41□□□□□ -0.42
TRAPPC12-218ENST00000479897 TRIM39Q9HCM9 518 aa12.41□□□□□ -0.42
TRAPPC12-218ENST00000479897 TM9SF3Q9HD45 589 aa12.41□□□□□ -0.42
TRAPPC12-218ENST00000479897 SLC17A6Q9P2U8 582 aa12.41□□□□□ -0.42
TRAPPC12-218ENST00000479897 SLC24A2Q9UI40 661 aa12.41□□□□□ -0.42
TRAPPC12-218ENST00000479897 SLC17A4Q9Y2C5 497 aa12.41□□□□□ -0.42
TRAPPC12-218ENST00000479897 CA5BQ9Y2D0 317 aa12.41□□□□□ -0.42
TRAPPC12-218ENST00000479897 OR1A2Q9Y585 309 aa12.41□□□□□ -0.42
TRAPPC12-218ENST00000479897 PCDHB1Q9Y5F3 818 aa12.41□□□□□ -0.42
TRAPPC12-218ENST00000479897 COMMD10Q9Y6G5 202 aa12.41□□□□□ -0.42
TRAPPC12-218ENST00000479897 OAS3Q9Y6K5 1087 aaKnown RBP12.41□□□□□ -0.42
TRAPPC12-218ENST00000479897 SLCO1B1Q9Y6L6 691 aa12.41□□□□□ -0.42
TRAPPC12-218ENST00000479897 PI4KAP42356 2102 aa12.41□□□□□ -0.42
TRAPPC12-218ENST00000479897 ZFC3H1O60293 1989 aaKnown RBP12.4□□□□□ -0.42
TRAPPC12-218ENST00000479897 TNFRSF10CO14798 259 aa12.4□□□□□ -0.42
TRAPPC12-218ENST00000479897 CHUKO15111 745 aa12.4□□□□□ -0.42
TRAPPC12-218ENST00000479897 INPP4BO15327 924 aa12.4□□□□□ -0.42
TRAPPC12-218ENST00000479897 NDUFS3O75489 264 aa12.4□□□□□ -0.42
TRAPPC12-218ENST00000479897 AHSGP02765 367 aa12.4□□□□□ -0.42
TRAPPC12-218ENST00000479897 ESR1P03372 595 aa12.4□□□□□ -0.42
TRAPPC12-218ENST00000479897 SHBGP04278 402 aa12.4□□□□□ -0.42
TRAPPC12-218ENST00000479897 THEGLP0DJG4 465 aa12.4□□□□□ -0.42
TRAPPC12-218ENST00000479897 MSH3P20585 1137 aa12.4□□□□□ -0.42
TRAPPC12-218ENST00000479897 CD9P21926 228 aa12.4□□□□□ -0.42
TRAPPC12-218ENST00000479897 ITPKAP23677 461 aa12.4□□□□□ -0.42
TRAPPC12-218ENST00000479897 HTR1BP28222 390 aa12.4□□□□□ -0.42
TRAPPC12-218ENST00000479897 GCAP28676 217 aa12.4□□□□□ -0.42
TRAPPC12-218ENST00000479897 DHPSP49366 369 aaPredicted RBP12.4□□□□□ -0.42
TRAPPC12-218ENST00000479897 LIMK2P53671 638 aa12.4□□□□□ -0.42
TRAPPC12-218ENST00000479897 TMEM115Q12893 351 aaPredicted RBP12.4□□□□□ -0.42
TRAPPC12-218ENST00000479897 PTK2BQ14289 1009 aa12.4□□□□□ -0.42
TRAPPC12-218ENST00000479897 BCL7AQ4VC05 210 aa12.4□□□□□ -0.42
TRAPPC12-218ENST00000479897 KHDC1Q4VXA5 237 aaKnown RBP12.4□□□□□ -0.42
TRAPPC12-218ENST00000479897 ZNF789Q5FWF6 425 aa12.4□□□□□ -0.42
TRAPPC12-218ENST00000479897 GRTP1Q5TC63 336 aa12.4□□□□□ -0.42
TRAPPC12-218ENST00000479897 LRIG3Q6UXM1 1119 aa12.4□□□□□ -0.42
TRAPPC12-218ENST00000479897 KDM7AQ6ZMT4 941 aa12.4□□□□□ -0.42
TRAPPC12-218ENST00000479897 RABEPKQ7Z6M1 372 aa12.4□□□□□ -0.42
TRAPPC12-218ENST00000479897 STRA8Q7Z7C7 330 aa12.4□□□□□ -0.42
TRAPPC12-218ENST00000479897 ADGRG6Q86SQ4 1221 aa12.4□□□□□ -0.42
TRAPPC12-218ENST00000479897 LDB1Q86U70 411 aaPredicted RBP12.4□□□□□ -0.42
TRAPPC12-218ENST00000479897 ZC3HC1Q86WB0 502 aaKnown RBP12.4□□□□□ -0.42
TRAPPC12-218ENST00000479897 SYT12Q8IV01 421 aa12.4□□□□□ -0.42
TRAPPC12-218ENST00000479897 IQCKQ8N0W5 287 aa12.4□□□□□ -0.42
TRAPPC12-218ENST00000479897 SLC22A18ASQ8N1D0 253 aa12.4□□□□□ -0.42
TRAPPC12-218ENST00000479897 RIBC1Q8N443 379 aaPredicted RBP12.4□□□□□ -0.42
TRAPPC12-218ENST00000479897 DEFB119Q8N690 84 aa12.4□□□□□ -0.42
TRAPPC12-218ENST00000479897 PPM1NQ8N819 430 aa12.4□□□□□ -0.42
TRAPPC12-218ENST00000479897 PRSS33Q8NF86 280 aa12.4□□□□□ -0.42
TRAPPC12-218ENST00000479897 OR13H1Q8NG92 308 aa12.4□□□□□ -0.42
TRAPPC12-218ENST00000479897 GDAP1Q8TB36 358 aa12.4□□□□□ -0.42
TRAPPC12-218ENST00000479897 ZNF514Q96K75 400 aaPredicted RBP12.4□□□□□ -0.42
TRAPPC12-218ENST00000479897 WDR92Q96MX6 357 aa12.4□□□□□ -0.42
TRAPPC12-218ENST00000479897 BIRC8Q96P09 236 aa12.4□□□□□ -0.42
TRAPPC12-218ENST00000479897 LGR4Q9BXB1 951 aa12.4□□□□□ -0.42
TRAPPC12-218ENST00000479897 CLPBQ9H078 707 aa12.4□□□□□ -0.42
TRAPPC12-218ENST00000479897 FBXO6Q9NRD1 293 aaPredicted RBP12.4□□□□□ -0.42
TRAPPC12-218ENST00000479897 AASDHPPTQ9NRN7 309 aa12.4□□□□□ -0.42
TRAPPC12-218ENST00000479897 EURLQ9NYK6 297 aa12.4□□□□□ -0.42
TRAPPC12-218ENST00000479897 TXNDC16Q9P2K2 825 aa12.4□□□□□ -0.42
TRAPPC12-218ENST00000479897 PILRBQ9UKJ0 227 aa12.4□□□□□ -0.42
TRAPPC12-218ENST00000479897 GPR34Q9UPC5 381 aa12.4□□□□□ -0.42
TRAPPC12-218ENST00000479897 NFS1Q9Y697 457 aa12.4□□□□□ -0.42
TRAPPC12-218ENST00000479897 PCDH15Q96QU1 1955 aa12.39□□□□□ -0.43
TRAPPC12-218ENST00000479897 SPTY2D1-AS1A0A0U1RR47 76 aa12.39□□□□□ -0.43
TRAPPC12-218ENST00000479897 A0A1B0GTW7 788 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms