RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 GNAZP19086 355 aa5.4□□□□□ -1.54
USF3-202ENST00000478658 EIF1AXP47813 144 aaKnown RBP5.4□□□□□ -1.54
USF3-202ENST00000478658 UBE2G2P60604 165 aa5.4□□□□□ -1.54
USF3-202ENST00000478658 BNIP1Q12981 228 aa5.4□□□□□ -1.54
USF3-202ENST00000478658 FAM74A1Q5RGS3 127 aa5.4□□□□□ -1.54
USF3-202ENST00000478658 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.4□□□□□ -1.54
USF3-202ENST00000478658 MPP7Q5T2T1 576 aa5.4□□□□□ -1.54
USF3-202ENST00000478658 GRTP1Q5TC63 336 aa5.4□□□□□ -1.54
USF3-202ENST00000478658 ERN2Q76MJ5 926 aaKnown RBP5.4□□□□□ -1.54
USF3-202ENST00000478658 BEST3Q8N1M1 668 aa5.4□□□□□ -1.54
USF3-202ENST00000478658 DTX3Q8N9I9 347 aa5.4□□□□□ -1.54
USF3-202ENST00000478658 SLC7A6OSQ96CW6 309 aaPredicted RBP5.4□□□□□ -1.54
USF3-202ENST00000478658 MTFMTQ96DP5 389 aaKnown RBP5.4□□□□□ -1.54
USF3-202ENST00000478658 PPP3R2Q96LZ3 170 aa5.4□□□□□ -1.54
USF3-202ENST00000478658 CAMK1GQ96NX5 476 aa5.4□□□□□ -1.54
USF3-202ENST00000478658 FAM83CQ9BQN1 747 aa5.4□□□□□ -1.54
USF3-202ENST00000478658 C2orf49Q9BVC5 232 aaPredicted RBP5.4□□□□□ -1.54
USF3-202ENST00000478658 SLC5A7Q9GZV3 580 aa5.4□□□□□ -1.54
USF3-202ENST00000478658 SOX17Q9H6I2 414 aaPredicted RBP5.4□□□□□ -1.54
USF3-202ENST00000478658 PDE7BQ9NP56 450 aa5.4□□□□□ -1.54
USF3-202ENST00000478658 ABRACLQ9P1F3 81 aa5.4□□□□□ -1.54
USF3-202ENST00000478658 CDK12Q9NYV4 1490 aaPredicted RBP5.4□□□□□ -1.54
USF3-202ENST00000478658 CDC42BPGQ6DT37 1551 aa5.4□□□□□ -1.54
USF3-202ENST00000478658 CLASP1Q7Z460 1538 aa5.4□□□□□ -1.55
USF3-202ENST00000478658 USP17L15C9J2P7 530 aa5.4□□□□□ -1.55
USF3-202ENST00000478658 USP17L13C9JLJ4 530 aa5.4□□□□□ -1.55
USF3-202ENST00000478658 USP17L11C9JVI0 530 aa5.4□□□□□ -1.55
USF3-202ENST00000478658 USP17L18D6R9N7 530 aa5.4□□□□□ -1.55
USF3-202ENST00000478658 USP17L22D6RA61 530 aa5.4□□□□□ -1.55
USF3-202ENST00000478658 USP17L17D6RBQ6 530 aa5.4□□□□□ -1.55
USF3-202ENST00000478658 USP17L19D6RCP7 530 aa5.4□□□□□ -1.55
USF3-202ENST00000478658 USP17L20D6RJB6 530 aa5.4□□□□□ -1.55
USF3-202ENST00000478658 EML1O00423 815 aa5.4□□□□□ -1.55
USF3-202ENST00000478658 AURKAO14965 403 aa5.4□□□□□ -1.55
USF3-202ENST00000478658 CDC123O75794 336 aaPredicted RBP5.4□□□□□ -1.55
USF3-202ENST00000478658 HEXBP07686 556 aa5.4□□□□□ -1.55
USF3-202ENST00000478658 ITPKAP23677 461 aa5.4□□□□□ -1.55
USF3-202ENST00000478658 SLC6A2P23975 617 aa5.4□□□□□ -1.55
USF3-202ENST00000478658 HOXC9P31274 260 aa5.4□□□□□ -1.55
USF3-202ENST00000478658 CDH8P55286 799 aa5.4□□□□□ -1.55
USF3-202ENST00000478658 RAB5BP61020 215 aa5.4□□□□□ -1.55
USF3-202ENST00000478658 PRKCDQ05655 676 aa5.4□□□□□ -1.55
USF3-202ENST00000478658 USP17L24Q0WX57 530 aa5.4□□□□□ -1.55
USF3-202ENST00000478658 PTK7Q13308 1070 aa5.4□□□□□ -1.55
USF3-202ENST00000478658 FNDC3BQ53EP0 1204 aaKnown RBP5.4□□□□□ -1.55
USF3-202ENST00000478658 DCP2Q8IU60 420 aaKnown RBP5.4□□□□□ -1.55
USF3-202ENST00000478658 MMAAQ8IVH4 418 aaKnown RBP5.4□□□□□ -1.55
USF3-202ENST00000478658 TMEM104Q8NE00 496 aa5.4□□□□□ -1.55
USF3-202ENST00000478658 SPATA4Q8NEY3 305 aa5.4□□□□□ -1.55
USF3-202ENST00000478658 OR4K1Q8NGD4 311 aa5.4□□□□□ -1.55
USF3-202ENST00000478658 ACOT11Q8WXI4 607 aaPredicted RBP5.4□□□□□ -1.55
USF3-202ENST00000478658 CPXM1Q96SM3 734 aa5.4□□□□□ -1.55
USF3-202ENST00000478658 LGMNQ99538 433 aa5.4□□□□□ -1.55
USF3-202ENST00000478658 SLC7A11Q9UPY5 501 aa5.4□□□□□ -1.55
USF3-202ENST00000478658 A0A0A0MRY4 1105 aa5.4□□□□□ -1.55
USF3-202ENST00000478658 AGAP14A8MT82 685 aa5.4□□□□□ -1.55
USF3-202ENST00000478658 HACD1B0YJ81 288 aa5.4□□□□□ -1.55
USF3-202ENST00000478658 PRKAB2O43741 272 aa5.4□□□□□ -1.55
USF3-202ENST00000478658 NRP2O60462 931 aa5.4□□□□□ -1.55
USF3-202ENST00000478658 RAD51DO75771 328 aa5.4□□□□□ -1.55
USF3-202ENST00000478658 NTRK1P04629 796 aa5.4□□□□□ -1.55
USF3-202ENST00000478658 CKMP06732 381 aa5.4□□□□□ -1.55
USF3-202ENST00000478658 FGF4P08620 206 aa5.4□□□□□ -1.55
USF3-202ENST00000478658 MBL2P11226 248 aaPredicted RBP5.4□□□□□ -1.55
USF3-202ENST00000478658 PRPS2P11908 318 aa5.4□□□□□ -1.55
USF3-202ENST00000478658 ADRA1DP25100 572 aa5.4□□□□□ -1.55
USF3-202ENST00000478658 IL3RAP26951 378 aa5.4□□□□□ -1.55
USF3-202ENST00000478658 SCNN1DP51172 638 aa5.4□□□□□ -1.55
USF3-202ENST00000478658 ACTA2P62736 377 aa5.4□□□□□ -1.55
USF3-202ENST00000478658 ACTC1P68032 377 aa5.4□□□□□ -1.55
USF3-202ENST00000478658 ACTA1P68133 377 aa5.4□□□□□ -1.55
USF3-202ENST00000478658 ADAM15Q13444 863 aa5.4□□□□□ -1.55
USF3-202ENST00000478658 TAF9Q16594 264 aa5.4□□□□□ -1.55
USF3-202ENST00000478658 TIGD5Q53EQ6 642 aa5.4□□□□□ -1.55
USF3-202ENST00000478658 TNNI3KQ59H18 835 aa5.4□□□□□ -1.55
USF3-202ENST00000478658 SPANXN3Q5MJ09 141 aa5.4□□□□□ -1.55
USF3-202ENST00000478658 TMPRSS7Q7RTY8 843 aa5.4□□□□□ -1.55
USF3-202ENST00000478658 GPR142Q7Z601 462 aa5.4□□□□□ -1.55
USF3-202ENST00000478658 RABEPKQ7Z6M1 372 aa5.4□□□□□ -1.55
USF3-202ENST00000478658 TC2NQ8N9U0 490 aa5.4□□□□□ -1.55
USF3-202ENST00000478658 NDNFQ8TB73 568 aa5.4□□□□□ -1.55
USF3-202ENST00000478658 MAL2Q969L2 176 aa5.4□□□□□ -1.55
USF3-202ENST00000478658 UROC1Q96N76 676 aa5.4□□□□□ -1.55
USF3-202ENST00000478658 SPATA13Q96N96 652 aa5.4□□□□□ -1.55
USF3-202ENST00000478658 TMEM209Q96SK2 561 aa5.4□□□□□ -1.55
USF3-202ENST00000478658 CGRRF1Q99675 332 aa5.4□□□□□ -1.55
USF3-202ENST00000478658 SULT4A1Q9BR01 284 aa5.4□□□□□ -1.55
USF3-202ENST00000478658 ACTRT3Q9BYD9 372 aa5.4□□□□□ -1.55
USF3-202ENST00000478658 MTG2Q9H4K7 406 aa5.4□□□□□ -1.55
USF3-202ENST00000478658 KIF25Q9UIL4 384 aa5.4□□□□□ -1.55
USF3-202ENST00000478658 LAMP5Q9UJQ1 280 aa5.4□□□□□ -1.55
USF3-202ENST00000478658 RNF212BA8MTL3 300 aa5.4□□□□□ -1.55
USF3-202ENST00000478658 AOAHP28039 575 aa5.4□□□□□ -1.55
USF3-202ENST00000478658 LTKP29376 864 aa5.4□□□□□ -1.55
USF3-202ENST00000478658 POLD2P49005 469 aa5.4□□□□□ -1.55
USF3-202ENST00000478658 TTPAP49638 278 aa5.4□□□□□ -1.55
USF3-202ENST00000478658 GBX2P52951 348 aaPredicted RBP5.4□□□□□ -1.55
USF3-202ENST00000478658 PRKCZQ05513 592 aa5.4□□□□□ -1.55
USF3-202ENST00000478658 PDK3Q15120 406 aa5.4□□□□□ -1.55
USF3-202ENST00000478658 RAB11BQ15907 218 aa5.4□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms