RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.82□□□□□ -1.32
BRCA1-215ENST00000478531 CPED1A4D0V7 1026 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 MROH6A6NGR9 719 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 OR51F1A6NGY5 319 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 OR2AG2A6NM03 316 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 DNAJC6O75061 913 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 CDK14O94921 469 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 PRSS56P0CW18 603 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 ITGALP20701 1170 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 MGAT1P26572 445 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 PBLDP30039 288 aaPredicted RBP6.82□□□□□ -1.32
BRCA1-215ENST00000478531 MRPS25P82663 173 aaKnown RBP6.82□□□□□ -1.32
BRCA1-215ENST00000478531 SARNPP82979 210 aaKnown RBP6.82□□□□□ -1.32
BRCA1-215ENST00000478531 FOXC1Q12948 553 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 PEX6Q13608 980 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 PTK6Q13882 451 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 GTF2H3Q13889 308 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 INSCQ1MX18 579 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 PROX2Q3B8N5 592 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 PYCR3Q53H96 274 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 C6orf132Q5T0Z8 1188 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 GPRC6AQ5T6X5 926 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 CASC4Q6P4E1 433 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 ZNF534Q76KX8 674 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 TAS2R42Q7RTR8 314 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 ADGRG6Q86SQ4 1221 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 SFTPA2Q8IWL1 248 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 SLC35F3Q8IY50 421 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 ZNF398Q8TD17 642 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 STYXQ8WUJ0 223 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 TBATAQ96M53 351 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 ZNF778Q96MU6 729 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 VPS35Q96QK1 796 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 TRIM31Q9BZY9 425 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 ZCCHC2Q9C0B9 1178 aaKnown RBP6.82□□□□□ -1.32
BRCA1-215ENST00000478531 OSGEPL1Q9H4B0 414 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 TRIM39Q9HCM9 518 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 NLE1Q9NVX2 485 aaPredicted RBP6.82□□□□□ -1.32
BRCA1-215ENST00000478531 SYBUQ9NX95 663 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 TOR4AQ9NXH8 423 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 TAAR2Q9P1P5 351 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 RNF14Q9UBS8 474 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 PCYOX1Q9UHG3 505 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 APOBEC2Q9Y235 224 aaKnown RBP6.82□□□□□ -1.32
BRCA1-215ENST00000478531 KCNK6Q9Y257 313 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 DNAJC16Q9Y2G8 782 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 NEU2Q9Y3R4 380 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 TCAF1Q9Y4C2 921 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 ST14Q9Y5Y6 855 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 DSPP15924 2871 aaKnown RBP6.82□□□□□ -1.32
BRCA1-215ENST00000478531 MED19A0JLT2 244 aaPredicted RBP6.81□□□□□ -1.32
BRCA1-215ENST00000478531 CCDC188H7C350 402 aa6.81□□□□□ -1.32
BRCA1-215ENST00000478531 TPP1O14773 563 aa6.81□□□□□ -1.32
BRCA1-215ENST00000478531 TTI1O43156 1089 aa6.81□□□□□ -1.32
BRCA1-215ENST00000478531 GRID2O43424 1007 aa6.81□□□□□ -1.32
BRCA1-215ENST00000478531 NUAK1O60285 661 aa6.81□□□□□ -1.32
BRCA1-215ENST00000478531 SNX2O60749 519 aa6.81□□□□□ -1.32
BRCA1-215ENST00000478531 URI1O94763 535 aaPredicted RBP6.81□□□□□ -1.32
BRCA1-215ENST00000478531 CKMT2P17540 419 aa6.81□□□□□ -1.32
BRCA1-215ENST00000478531 MSH3P20585 1137 aa6.81□□□□□ -1.32
BRCA1-215ENST00000478531 ADRA1DP25100 572 aa6.81□□□□□ -1.32
BRCA1-215ENST00000478531 PTGIRP43119 386 aa6.81□□□□□ -1.32
BRCA1-215ENST00000478531 ACADVLP49748 655 aa6.81□□□□□ -1.32
BRCA1-215ENST00000478531 CDKN1CP49918 316 aaPredicted RBP6.81□□□□□ -1.32
BRCA1-215ENST00000478531 ARSDP51689 593 aa6.81□□□□□ -1.32
BRCA1-215ENST00000478531 PRAMEP78395 509 aa6.81□□□□□ -1.32
BRCA1-215ENST00000478531 XIAPP98170 497 aa6.81□□□□□ -1.32
BRCA1-215ENST00000478531 CDK16Q00536 496 aa6.81□□□□□ -1.32
BRCA1-215ENST00000478531 TMEM115Q12893 351 aaPredicted RBP6.81□□□□□ -1.32
BRCA1-215ENST00000478531 LAMB3Q13751 1172 aa6.81□□□□□ -1.32
BRCA1-215ENST00000478531 NR0B2Q15466 257 aa6.81□□□□□ -1.32
BRCA1-215ENST00000478531 SEPT7Q16181 437 aaKnown RBP6.81□□□□□ -1.32
BRCA1-215ENST00000478531 SKIDA1Q1XH10 827 aa6.81□□□□□ -1.32
BRCA1-215ENST00000478531 LDLRAP1Q5SW96 308 aa6.81□□□□□ -1.32
BRCA1-215ENST00000478531 TSTD2Q5T7W7 516 aa6.81□□□□□ -1.32
BRCA1-215ENST00000478531 IZUMO3Q5VZ72 239 aa6.81□□□□□ -1.32
BRCA1-215ENST00000478531 GUSBP11Q6P575 273 aa6.81□□□□□ -1.32
BRCA1-215ENST00000478531 LRRC8BQ6P9F7 803 aa6.81□□□□□ -1.32
BRCA1-215ENST00000478531 SNX20Q7Z614 316 aa6.81□□□□□ -1.32
BRCA1-215ENST00000478531 GLRX5Q86SX6 157 aa6.81□□□□□ -1.32
BRCA1-215ENST00000478531 SLCO6A1Q86UG4 719 aa6.81□□□□□ -1.32
BRCA1-215ENST00000478531 LRRTM4Q86VH4 590 aa6.81□□□□□ -1.32
BRCA1-215ENST00000478531 NRROSQ86YC3 692 aa6.81□□□□□ -1.32
BRCA1-215ENST00000478531 JAMLQ86YT9 394 aa6.81□□□□□ -1.32
BRCA1-215ENST00000478531 PPIL6Q8IXY8 311 aa6.81□□□□□ -1.32
BRCA1-215ENST00000478531 ARL10Q8N8L6 244 aa6.81□□□□□ -1.32
BRCA1-215ENST00000478531 DDHD1Q8NEL9 900 aa6.81□□□□□ -1.32
BRCA1-215ENST00000478531 OR13J1Q8NGT2 312 aa6.81□□□□□ -1.32
BRCA1-215ENST00000478531 OR6P1Q8NGX9 317 aa6.81□□□□□ -1.32
BRCA1-215ENST00000478531 IFI44Q8TCB0 444 aa6.81□□□□□ -1.32
BRCA1-215ENST00000478531 GPBAR1Q8TDU6 330 aa6.81□□□□□ -1.32
BRCA1-215ENST00000478531 ZDHHC1Q8WTX9 485 aa6.81□□□□□ -1.32
BRCA1-215ENST00000478531 GLMNQ92990 594 aa6.81□□□□□ -1.32
BRCA1-215ENST00000478531 CCDC97Q96F63 343 aaPredicted RBP6.81□□□□□ -1.32
BRCA1-215ENST00000478531 SCARF2Q96GP6 870 aaPredicted RBP6.81□□□□□ -1.32
BRCA1-215ENST00000478531 RUNDC3BQ96NL0 473 aa6.81□□□□□ -1.32
BRCA1-215ENST00000478531 BOCQ9BWV1 1114 aa6.81□□□□□ -1.32
BRCA1-215ENST00000478531 IL22Q9GZX6 179 aa6.81□□□□□ -1.32
BRCA1-215ENST00000478531 SYNDIG1Q9H7V2 258 aa6.81□□□□□ -1.32
BRCA1-215ENST00000478531 CHRAC1Q9NRG0 131 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms