RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 DPCR1Q3MIW9 517 aa19.95■□□□□ 0.78
PDLIM1-202ENST00000477757 HENMT1Q5T8I9 393 aaKnown RBP19.95■□□□□ 0.78
PDLIM1-202ENST00000477757 CACHD1Q5VU97 1274 aa19.95■□□□□ 0.78
PDLIM1-202ENST00000477757 SLC6A19Q695T7 634 aa19.95■□□□□ 0.78
PDLIM1-202ENST00000477757 HPS6Q86YV9 775 aa19.95■□□□□ 0.78
PDLIM1-202ENST00000477757 MCOLN2Q8IZK6 566 aa19.95■□□□□ 0.78
PDLIM1-202ENST00000477757 ATPAF2Q8N5M1 289 aa19.95■□□□□ 0.78
PDLIM1-202ENST00000477757 RSC1A1Q92681 617 aa19.95■□□□□ 0.78
PDLIM1-202ENST00000477757 FCRL4Q96PJ5 515 aa19.95■□□□□ 0.78
PDLIM1-202ENST00000477757 WDR24Q96S15 920 aa19.95■□□□□ 0.78
PDLIM1-202ENST00000477757 CARD9Q9H257 536 aa19.95■□□□□ 0.78
PDLIM1-202ENST00000477757 SAMSN1Q9NSI8 373 aaKnown RBP19.95■□□□□ 0.78
PDLIM1-202ENST00000477757 ADGRG1Q9Y653 693 aa19.95■□□□□ 0.78
PDLIM1-202ENST00000477757 FADS2P1A8MWK0 482 aa19.94■□□□□ 0.78
PDLIM1-202ENST00000477757 GRID2O43424 1007 aa19.94■□□□□ 0.78
PDLIM1-202ENST00000477757 PRPSAP2O60256 369 aa19.94■□□□□ 0.78
PDLIM1-202ENST00000477757 VIPP01282 170 aa19.94■□□□□ 0.78
PDLIM1-202ENST00000477757 CDH6P55285 790 aa19.94■□□□□ 0.78
PDLIM1-202ENST00000477757 TUBB3Q13509 450 aa19.94■□□□□ 0.78
PDLIM1-202ENST00000477757 MARC1Q5VT66 337 aa19.94■□□□□ 0.78
PDLIM1-202ENST00000477757 PWWP2BQ6NUJ5 590 aa19.94■□□□□ 0.78
PDLIM1-202ENST00000477757 TRIM48Q8IWZ4 208 aa19.94■□□□□ 0.78
PDLIM1-202ENST00000477757 NSMCE1Q8WV22 266 aa19.94■□□□□ 0.78
PDLIM1-202ENST00000477757 PNPLA2Q96AD5 504 aa19.94■□□□□ 0.78
PDLIM1-202ENST00000477757 PHF12Q96QT6 1004 aa19.94■□□□□ 0.78
PDLIM1-202ENST00000477757 OSGEPL1Q9H4B0 414 aa19.94■□□□□ 0.78
PDLIM1-202ENST00000477757 ZWILCHQ9H900 591 aa19.94■□□□□ 0.78
PDLIM1-202ENST00000477757 PDE7BQ9NP56 450 aa19.94■□□□□ 0.78
PDLIM1-202ENST00000477757 MAP10Q9P2G4 905 aa19.94■□□□□ 0.78
PDLIM1-202ENST00000477757 SLC5A6Q9Y289 635 aa19.94■□□□□ 0.78
PDLIM1-202ENST00000477757 MIPP30301 263 aa19.93■□□□□ 0.78
PDLIM1-202ENST00000477757 SLC19A1P41440 591 aa19.93■□□□□ 0.78
PDLIM1-202ENST00000477757 PTGIRP43119 386 aa19.93■□□□□ 0.78
PDLIM1-202ENST00000477757 EPHB1P54762 984 aa19.93■□□□□ 0.78
PDLIM1-202ENST00000477757 RPS15P62841 145 aaKnown RBP19.93■□□□□ 0.78
PDLIM1-202ENST00000477757 MAMLD1Q13495 774 aa19.93■□□□□ 0.78
PDLIM1-202ENST00000477757 TMCO3Q6UWJ1 677 aa19.93■□□□□ 0.78
PDLIM1-202ENST00000477757 SRRM1Q8IYB3 904 aaKnown RBP19.93■□□□□ 0.78
PDLIM1-202ENST00000477757 ZDHHC12Q96GR4 267 aa19.93■□□□□ 0.78
PDLIM1-202ENST00000477757 AGPAT1Q99943 283 aa19.93■□□□□ 0.78
PDLIM1-202ENST00000477757 AKIRIN1Q9H9L7 192 aaPredicted RBP19.93■□□□□ 0.78
PDLIM1-202ENST00000477757 KLC4Q9NSK0 619 aa19.93■□□□□ 0.78
PDLIM1-202ENST00000477757 POT1Q9NUX5 634 aa19.93■□□□□ 0.78
PDLIM1-202ENST00000477757 ETNK2Q9NVF9 386 aa19.93■□□□□ 0.78
PDLIM1-202ENST00000477757 ZNF624Q9P2J8 865 aaPredicted RBP19.93■□□□□ 0.78
PDLIM1-202ENST00000477757 EPHA6Q9UF33 1036 aa19.93■□□□□ 0.78
PDLIM1-202ENST00000477757 RARRES3Q9UL19 164 aa19.93■□□□□ 0.78
PDLIM1-202ENST00000477757 POLQO75417 2590 aa19.92■□□□□ 0.78
PDLIM1-202ENST00000477757 H3BRJ5 948 aa19.92■□□□□ 0.78
PDLIM1-202ENST00000477757 MTA2O94776 668 aa19.92■□□□□ 0.78
PDLIM1-202ENST00000477757 NR6A1Q15406 480 aa19.92■□□□□ 0.78
PDLIM1-202ENST00000477757 FAM199XQ6PEV8 388 aaPredicted RBP19.92■□□□□ 0.78
PDLIM1-202ENST00000477757 FAM92BQ6ZTR7 304 aa19.92■□□□□ 0.78
PDLIM1-202ENST00000477757 SLC41A2Q96JW4 573 aa19.92■□□□□ 0.78
PDLIM1-202ENST00000477757 C5orf34Q96MH7 638 aa19.92■□□□□ 0.78
PDLIM1-202ENST00000477757 LYSMD1Q96S90 227 aa19.92■□□□□ 0.78
PDLIM1-202ENST00000477757 MFRPQ9BY79 579 aa19.92■□□□□ 0.78
PDLIM1-202ENST00000477757 RAB33BQ9H082 229 aa19.92■□□□□ 0.78
PDLIM1-202ENST00000477757 NT5MQ9NPB1 228 aa19.92■□□□□ 0.78
PDLIM1-202ENST00000477757 PARVAQ9NVD7 372 aa19.92■□□□□ 0.78
PDLIM1-202ENST00000477757 SEMA5BQ9P283 1151 aa19.92■□□□□ 0.78
PDLIM1-202ENST00000477757 ATXN10Q9UBB4 475 aa19.92■□□□□ 0.78
PDLIM1-202ENST00000477757 SIK3Q9Y2K2 1263 aa19.92■□□□□ 0.78
PDLIM1-202ENST00000477757 RNF8O76064 485 aa19.91■□□□□ 0.78
PDLIM1-202ENST00000477757 CLDN7O95471 211 aa19.91■□□□□ 0.78
PDLIM1-202ENST00000477757 ZNF8P17098 575 aaPredicted RBP19.91■□□□□ 0.78
PDLIM1-202ENST00000477757 LPOP22079 712 aaPredicted RBP19.91■□□□□ 0.78
PDLIM1-202ENST00000477757 SPINT3P49223 89 aa19.91■□□□□ 0.78
PDLIM1-202ENST00000477757 ZRANB3Q5FWF4 1079 aa19.91■□□□□ 0.78
PDLIM1-202ENST00000477757 ALG1LQ6GMV1 187 aa19.91■□□□□ 0.78
PDLIM1-202ENST00000477757 PLEKHA7Q6IQ23 1121 aa19.91■□□□□ 0.78
PDLIM1-202ENST00000477757 ACAD10Q6JQN1 1059 aa19.91■□□□□ 0.78
PDLIM1-202ENST00000477757 RHOT1Q8IXI2 618 aa19.91■□□□□ 0.78
PDLIM1-202ENST00000477757 TEX26Q8N6G2 289 aa19.91■□□□□ 0.78
PDLIM1-202ENST00000477757 RBMXL3Q8N7X1 1067 aaKnown RBP19.91■□□□□ 0.78
PDLIM1-202ENST00000477757 ADAMTS17Q8TE56 1095 aa19.91■□□□□ 0.78
PDLIM1-202ENST00000477757 TDRD1Q9BXT4 1180 aaKnown RBP19.91■□□□□ 0.78
PDLIM1-202ENST00000477757 POLR1EQ9GZS1 481 aaKnown RBP19.91■□□□□ 0.78
PDLIM1-202ENST00000477757 FAM83DQ9H4H8 585 aa19.91■□□□□ 0.78
PDLIM1-202ENST00000477757 G3BP2Q9UN86 482 aaKnown RBP19.91■□□□□ 0.78
PDLIM1-202ENST00000477757 SSU72P8A0A1W2PR75 194 aa19.9■□□□□ 0.78
PDLIM1-202ENST00000477757 GPR89AB7ZAQ6 455 aa19.9■□□□□ 0.78
PDLIM1-202ENST00000477757 ATMINO43313 823 aaPredicted RBP19.9■□□□□ 0.78
PDLIM1-202ENST00000477757 CBX6O95503 412 aa19.9■□□□□ 0.78
PDLIM1-202ENST00000477757 GPR89BP0CG08 455 aa19.9■□□□□ 0.78
PDLIM1-202ENST00000477757 FOLR1P15328 257 aa19.9■□□□□ 0.78
PDLIM1-202ENST00000477757 ARL4AP40617 200 aa19.9■□□□□ 0.78
PDLIM1-202ENST00000477757 GPR18Q14330 331 aa19.9■□□□□ 0.78
PDLIM1-202ENST00000477757 IHHQ14623 411 aa19.9■□□□□ 0.78
PDLIM1-202ENST00000477757 DPYSL2Q16555 572 aa19.9■□□□□ 0.78
PDLIM1-202ENST00000477757 IRGCQ6NXR0 463 aa19.9■□□□□ 0.78
PDLIM1-202ENST00000477757 BPHLQ86WA6 291 aaPredicted RBP19.9■□□□□ 0.78
PDLIM1-202ENST00000477757 RBM12BQ8IXT5 1001 aaKnown RBP19.9■□□□□ 0.78
PDLIM1-202ENST00000477757 SLC34A3Q8N130 599 aa19.9■□□□□ 0.78
PDLIM1-202ENST00000477757 SIDT2Q8NBJ9 832 aaKnown RBP19.9■□□□□ 0.78
PDLIM1-202ENST00000477757 FDCSPQ8NFU4 85 aa19.9■□□□□ 0.78
PDLIM1-202ENST00000477757 UBXN4Q92575 508 aa19.9■□□□□ 0.78
PDLIM1-202ENST00000477757 C19orf60Q96EN9 201 aa19.9■□□□□ 0.78
PDLIM1-202ENST00000477757 NUDT9Q9BW91 350 aa19.9■□□□□ 0.78
PDLIM1-202ENST00000477757 OR2AG1Q9H205 316 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms