RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 FNIP1Q8TF40 1166 aa7.24□□□□□ -1.25
BRCA1-214ENST00000477152 SH3KBP1Q96B97 665 aa7.24□□□□□ -1.25
BRCA1-214ENST00000477152 ECHDC3Q96DC8 303 aa7.24□□□□□ -1.25
BRCA1-214ENST00000477152 TEFMQ96QE5 360 aaKnown RBP7.24□□□□□ -1.25
BRCA1-214ENST00000477152 PSKH2Q96QS6 385 aa7.24□□□□□ -1.25
BRCA1-214ENST00000477152 ANP32EQ9BTT0 268 aa7.24□□□□□ -1.25
BRCA1-214ENST00000477152 FOXP3Q9BZS1 431 aa7.24□□□□□ -1.25
BRCA1-214ENST00000477152 SLC39A8Q9C0K1 460 aa7.24□□□□□ -1.25
BRCA1-214ENST00000477152 NOL6Q9H6R4 1146 aaKnown RBP7.24□□□□□ -1.25
BRCA1-214ENST00000477152 CARS2Q9HA77 564 aaKnown RBP7.24□□□□□ -1.25
BRCA1-214ENST00000477152 NEU3Q9UQ49 428 aa7.24□□□□□ -1.25
BRCA1-214ENST00000477152 COL6A6A6NMZ7 2263 aa7.24□□□□□ -1.25
BRCA1-214ENST00000477152 UNC13CQ8NB66 2214 aa7.24□□□□□ -1.25
BRCA1-214ENST00000477152 ESYT3A0FGR9 886 aa7.24□□□□□ -1.25
BRCA1-214ENST00000477152 GOLGA6CA6NDK9 693 aa7.24□□□□□ -1.25
BRCA1-214ENST00000477152 GOLGA6BA6NDN3 693 aa7.24□□□□□ -1.25
BRCA1-214ENST00000477152 SMTNL1A8MU46 457 aa7.24□□□□□ -1.25
BRCA1-214ENST00000477152 J3KR12 359 aa7.24□□□□□ -1.25
BRCA1-214ENST00000477152 CBFA2T2O43439 604 aa7.24□□□□□ -1.25
BRCA1-214ENST00000477152 SUSD5O60279 629 aa7.24□□□□□ -1.25
BRCA1-214ENST00000477152 CPP00450 1065 aa7.24□□□□□ -1.25
BRCA1-214ENST00000477152 GOLGA6DP0CG33 693 aa7.24□□□□□ -1.25
BRCA1-214ENST00000477152 GZMAP12544 262 aa7.24□□□□□ -1.25
BRCA1-214ENST00000477152 ERCC2P18074 760 aa7.24□□□□□ -1.25
BRCA1-214ENST00000477152 CDH6P55285 790 aa7.24□□□□□ -1.25
BRCA1-214ENST00000477152 NFATC3Q12968 1075 aa7.24□□□□□ -1.25
BRCA1-214ENST00000477152 SQSTM1Q13501 440 aa7.24□□□□□ -1.25
BRCA1-214ENST00000477152 HLTFQ14527 1009 aaKnown RBP eCLIP7.24□□□□□ -1.25
BRCA1-214ENST00000477152 NFKBIBQ15653 356 aa7.24□□□□□ -1.25
BRCA1-214ENST00000477152 PPP6R3Q5H9R7 873 aaPredicted RBP7.24□□□□□ -1.25
BRCA1-214ENST00000477152 PCSK4Q6UW60 755 aa7.24□□□□□ -1.25
BRCA1-214ENST00000477152 TMCO3Q6UWJ1 677 aa7.24□□□□□ -1.25
BRCA1-214ENST00000477152 FAM20CQ8IXL6 584 aa7.24□□□□□ -1.25
BRCA1-214ENST00000477152 RAVER1Q8IY67 606 aaKnown RBP7.24□□□□□ -1.25
BRCA1-214ENST00000477152 AGBL5Q8NDL9 886 aa7.24□□□□□ -1.25
BRCA1-214ENST00000477152 PDCD6IPQ8WUM4 868 aaKnown RBP7.24□□□□□ -1.25
BRCA1-214ENST00000477152 USP7Q93009 1102 aa7.24□□□□□ -1.25
BRCA1-214ENST00000477152 FUBP1Q96AE4 644 aaKnown RBP7.24□□□□□ -1.25
BRCA1-214ENST00000477152 KIAA1143Q96AT1 154 aaPredicted RBP7.24□□□□□ -1.25
BRCA1-214ENST00000477152 CELF6Q96J87 481 aaKnown RBP7.24□□□□□ -1.25
BRCA1-214ENST00000477152 PCDHB18PQ96TA0 734 aa7.24□□□□□ -1.25
BRCA1-214ENST00000477152 ZPBPQ9BS86 351 aa7.24□□□□□ -1.25
BRCA1-214ENST00000477152 FANCLQ9NW38 375 aa7.24□□□□□ -1.25
BRCA1-214ENST00000477152 GOLGA6AQ9NYA3 693 aa7.24□□□□□ -1.25
BRCA1-214ENST00000477152 SIK3Q9Y2K2 1263 aa7.24□□□□□ -1.25
BRCA1-214ENST00000477152 RNF215Q9Y6U7 377 aa7.24□□□□□ -1.25
BRCA1-214ENST00000477152 KIF26BQ2KJY2 2108 aa7.24□□□□□ -1.25
BRCA1-214ENST00000477152 SCN8AQ9UQD0 1980 aa7.23□□□□□ -1.25
BRCA1-214ENST00000477152 ASPMQ8IZT6 3477 aa7.23□□□□□ -1.25
BRCA1-214ENST00000477152 FAM95CA0A1B0GW59 222 aa7.23□□□□□ -1.25
BRCA1-214ENST00000477152 A0A1W2PQM1 296 aa7.23□□□□□ -1.25
BRCA1-214ENST00000477152 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.23□□□□□ -1.25
BRCA1-214ENST00000477152 ITIH2P19823 946 aa7.23□□□□□ -1.25
BRCA1-214ENST00000477152 ALDH4A1P30038 563 aa7.23□□□□□ -1.25
BRCA1-214ENST00000477152 GPR1P46091 355 aa7.23□□□□□ -1.25
BRCA1-214ENST00000477152 PDX1P52945 283 aa7.23□□□□□ -1.25
BRCA1-214ENST00000477152 EPHB1P54762 984 aa7.23□□□□□ -1.25
BRCA1-214ENST00000477152 RPL7AP62424 266 aaKnown RBP7.23□□□□□ -1.25
BRCA1-214ENST00000477152 MC1RQ01726 317 aa7.23□□□□□ -1.25
BRCA1-214ENST00000477152 LRP8Q14114 963 aa7.23□□□□□ -1.25
BRCA1-214ENST00000477152 ASIC2Q16515 512 aa7.23□□□□□ -1.25
BRCA1-214ENST00000477152 RAB6CQ53S08 254 aa7.23□□□□□ -1.25
BRCA1-214ENST00000477152 DCAF12Q5T6F0 453 aa7.23□□□□□ -1.25
BRCA1-214ENST00000477152 ARMC12Q5T9G4 340 aa7.23□□□□□ -1.25
BRCA1-214ENST00000477152 MARC1Q5VT66 337 aa7.23□□□□□ -1.25
BRCA1-214ENST00000477152 RAET1GQ6H3X3 334 aa7.23□□□□□ -1.25
BRCA1-214ENST00000477152 TIGD7Q6NT04 549 aaPredicted RBP7.23□□□□□ -1.25
BRCA1-214ENST00000477152 CYB5D1Q6P9G0 228 aa7.23□□□□□ -1.25
BRCA1-214ENST00000477152 B3GNT8Q7Z7M8 397 aa7.23□□□□□ -1.25
BRCA1-214ENST00000477152 OR10G6Q8NH81 332 aa7.23□□□□□ -1.25
BRCA1-214ENST00000477152 OR1E3Q8WZA6 343 aa7.23□□□□□ -1.25
BRCA1-214ENST00000477152 PDXPQ96GD0 296 aa7.23□□□□□ -1.25
BRCA1-214ENST00000477152 NUDCD1Q96RS6 583 aa7.23□□□□□ -1.25
BRCA1-214ENST00000477152 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.23□□□□□ -1.25
BRCA1-214ENST00000477152 DDA1Q9BW61 102 aa7.23□□□□□ -1.25
BRCA1-214ENST00000477152 KLC2Q9H0B6 622 aa7.23□□□□□ -1.25
BRCA1-214ENST00000477152 RAB6CQ9H0N0 254 aa7.23□□□□□ -1.25
BRCA1-214ENST00000477152 TMEM168Q9H0V1 697 aa7.23□□□□□ -1.25
BRCA1-214ENST00000477152 TRIT1Q9H3H1 467 aaKnown RBP7.23□□□□□ -1.25
BRCA1-214ENST00000477152 EPB41L1Q9H4G0 881 aa7.23□□□□□ -1.25
BRCA1-214ENST00000477152 LCMT1Q9UIC8 334 aa7.23□□□□□ -1.25
BRCA1-214ENST00000477152 BPTFQ12830 3046 aa7.23□□□□□ -1.25
BRCA1-214ENST00000477152 FREM2Q5SZK8 3169 aa7.23□□□□□ -1.25
BRCA1-214ENST00000477152 GCN1Q92616 2671 aaKnown RBP7.22□□□□□ -1.25
BRCA1-214ENST00000477152 PRAMEF33A0A0G2JMD5 474 aa7.22□□□□□ -1.25
BRCA1-214ENST00000477152 TMEM202A6NGA9 273 aa7.22□□□□□ -1.25
BRCA1-214ENST00000477152 LRRC10BA6NIK2 292 aa7.22□□□□□ -1.25
BRCA1-214ENST00000477152 ARHGAP6O43182 974 aa7.22□□□□□ -1.25
BRCA1-214ENST00000477152 NOBOXO60393 691 aa7.22□□□□□ -1.25
BRCA1-214ENST00000477152 BUB1BO60566 1050 aaPredicted RBP7.22□□□□□ -1.25
BRCA1-214ENST00000477152 PRAMEF10O60809 474 aa7.22□□□□□ -1.25
BRCA1-214ENST00000477152 IVLP07476 585 aa7.22□□□□□ -1.25
BRCA1-214ENST00000477152 ZNF30P17039 623 aa7.22□□□□□ -1.25
BRCA1-214ENST00000477152 PCK1P35558 622 aa7.22□□□□□ -1.25
BRCA1-214ENST00000477152 CCNFP41002 786 aa7.22□□□□□ -1.25
BRCA1-214ENST00000477152 GNPDA1P46926 289 aa7.22□□□□□ -1.25
BRCA1-214ENST00000477152 KLK7P49862 253 aa7.22□□□□□ -1.25
BRCA1-214ENST00000477152 TPM4P67936 248 aa7.22□□□□□ -1.25
BRCA1-214ENST00000477152 RALGDSQ12967 914 aa7.22□□□□□ -1.25
BRCA1-214ENST00000477152 MAMLD1Q13495 774 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms