RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 ELP4Q96EB1 424 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 VPS39Q96JC1 886 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 KLHL15Q96M94 604 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 SLC2A13Q96QE2 648 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 KCNK16Q96T55 309 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 SLC9A7Q96T83 725 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 NPAS1Q99742 590 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 RSRP1Q9BUV0 290 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 TSSK1BQ9BXA7 367 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 ZYG11BQ9C0D3 744 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 SEMA6AQ9H2E6 1030 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 PIGUQ9H490 435 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 TRABDQ9H4I3 376 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 XKR8Q9H6D3 395 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 LDAHQ9H6V9 325 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 LRRC4Q9HBW1 653 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 SSU72Q9NP77 194 aaKnown RBP4.13□□□□□ -1.75
CD55-208ENST00000476590 ZDHHC4Q9NPG8 344 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 SNX15Q9NRS6 342 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 SETD4Q9NVD3 440 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 KCNK4Q9NYG8 393 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 VSX1Q9NZR4 365 aaPredicted RBP4.13□□□□□ -1.75
CD55-208ENST00000476590 ARMCX1Q9P291 453 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 ABCD2Q9UBJ2 740 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 CTSFQ9UBX1 484 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 PCYOX1Q9UHG3 505 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 AMFRQ9UKV5 643 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 TMPRSS11EQ9UL52 423 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 AP4E1Q9UPM8 1137 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 GAB2Q9UQC2 676 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 LIPT1Q9Y234 373 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 RUVBL1Q9Y265 456 aaKnown RBP4.13□□□□□ -1.75
CD55-208ENST00000476590 PCDHB5Q9Y5E4 795 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 PCDHAC2Q9Y5I4 1007 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 SRPRBQ9Y5M8 271 aaKnown RBP4.13□□□□□ -1.75
CD55-208ENST00000476590 ABCC1P33527 1531 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 MAP3K4Q9Y6R4 1608 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 MYH9P35579 1960 aaKnown RBP4.12□□□□□ -1.75
CD55-208ENST00000476590 MYO5BQ9ULV0 1848 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 ABCA8O94911 1581 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 DLC1Q96QB1 1528 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 KIAA0556O60303 1618 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 DNAJC25-GNG10A0A024R161 153 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 A0A0B4J269 797 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 LOC100653049A0A140TA62 436 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 KRT87PA6NCN2 255 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 CCDC182A6NF36 153 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 MFSD2BA6NFX1 497 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 EFCAB7A8K855 629 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 FOXO6A8MYZ6 492 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 MASP2O00187 686 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 EML1O00423 815 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 NOP56O00567 594 aaKnown RBP4.12□□□□□ -1.75
CD55-208ENST00000476590 TPP1O14773 563 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 PHGDHO43175 533 aaKnown RBP4.12□□□□□ -1.75
CD55-208ENST00000476590 AKAP8O43823 692 aaKnown RBP4.12□□□□□ -1.75
CD55-208ENST00000476590 KRT34O76011 436 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 SEC14L2O76054 403 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 KLHL18O94889 574 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 OAZ2O95190 189 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 KCNH1O95259 989 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 MT-ND3P03897 115 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 SERPING1P05155 500 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 JUNP05412 331 aaKnown RBP4.12□□□□□ -1.75
CD55-208ENST00000476590 POLBP06746 335 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 DLDP09622 509 aaKnown RBP4.12□□□□□ -1.75
CD55-208ENST00000476590 PLA2G4BP0C869 781 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 MYL2P10916 166 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 DARSP14868 501 aaKnown RBP4.12□□□□□ -1.75
CD55-208ENST00000476590 ZNF26P17031 533 aaPredicted RBP4.12□□□□□ -1.75
CD55-208ENST00000476590 RHCEP18577 417 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 MX2P20592 715 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 ZP3P21754 424 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 CNTFP26441 200 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 CHRNA3P32297 505 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 EPHX2P34913 555 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 EIF2DP41214 584 aaKnown RBP4.12□□□□□ -1.75
CD55-208ENST00000476590 CSKP41240 450 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 PTGIRP43119 386 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 GRK6P43250 576 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 KLK7P49862 253 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 NT5C2P49902 561 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 SLC7A2P52569 658 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 ATP12AP54707 1039 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 EIF6P56537 245 aaKnown RBP4.12□□□□□ -1.75
CD55-208ENST00000476590 CARD18P57730 90 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 TAS2R60P59551 318 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 DEFA1P59665 94 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 DEFA3P59666 94 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 HNRNPKP61978 463 aaKnown RBP eCLIP4.12□□□□□ -1.75
CD55-208ENST00000476590 RHDQ02161 417 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 PTPN11Q06124 597 aaPredicted RBP4.12□□□□□ -1.75
CD55-208ENST00000476590 ZNF33AQ06730 810 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 RGS1Q08116 209 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 OVGP1Q12889 678 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 SEMA3BQ13214 749 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 TNK1Q13470 666 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 GRB7Q14451 532 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 ZNF460Q14592 562 aa4.12□□□□□ -1.75
CD55-208ENST00000476590 ACOX1Q15067 660 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms