RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 LAMB3Q13751 1172 aa16.2■□□□□ 0.18
APOBEC3F-203ENST00000476513 IHHQ14623 411 aa16.2■□□□□ 0.18
APOBEC3F-203ENST00000476513 CHRNA6Q15825 494 aa16.2■□□□□ 0.18
APOBEC3F-203ENST00000476513 HENMT1Q5T8I9 393 aaKnown RBP16.2■□□□□ 0.18
APOBEC3F-203ENST00000476513 PWWP2BQ6NUJ5 590 aa16.2■□□□□ 0.18
APOBEC3F-203ENST00000476513 TMCO3Q6UWJ1 677 aa16.2■□□□□ 0.18
APOBEC3F-203ENST00000476513 RAVER1Q8IY67 606 aaKnown RBP16.2■□□□□ 0.18
APOBEC3F-203ENST00000476513 ATPAF2Q8N5M1 289 aa16.2■□□□□ 0.18
APOBEC3F-203ENST00000476513 AOPEPQ8N6M6 819 aa16.2■□□□□ 0.18
APOBEC3F-203ENST00000476513 MFRPQ9BY79 579 aa16.2■□□□□ 0.18
APOBEC3F-203ENST00000476513 CARD9Q9H257 536 aa16.2■□□□□ 0.18
APOBEC3F-203ENST00000476513 OSGEPL1Q9H4B0 414 aa16.2■□□□□ 0.18
APOBEC3F-203ENST00000476513 ZWILCHQ9H900 591 aa16.2■□□□□ 0.18
APOBEC3F-203ENST00000476513 SLAMF7Q9NQ25 335 aa16.2■□□□□ 0.18
APOBEC3F-203ENST00000476513 PARVAQ9NVD7 372 aa16.2■□□□□ 0.18
APOBEC3F-203ENST00000476513 TAS2R14Q9NYV8 317 aa16.2■□□□□ 0.18
APOBEC3F-203ENST00000476513 ATXN10Q9UBB4 475 aa16.2■□□□□ 0.18
APOBEC3F-203ENST00000476513 DNPEPQ9ULA0 475 aa16.2■□□□□ 0.18
APOBEC3F-203ENST00000476513 SRPK3Q9UPE1 567 aa16.2■□□□□ 0.18
APOBEC3F-203ENST00000476513 ZNF451Q9Y4E5 1061 aa16.2■□□□□ 0.18
APOBEC3F-203ENST00000476513 ADGRG1Q9Y653 693 aa16.2■□□□□ 0.18
APOBEC3F-203ENST00000476513 H3BRJ5 948 aa16.19■□□□□ 0.18
APOBEC3F-203ENST00000476513 ATMINO43313 823 aaPredicted RBP16.19■□□□□ 0.18
APOBEC3F-203ENST00000476513 LRCH4O75427 683 aa16.19■□□□□ 0.18
APOBEC3F-203ENST00000476513 RNF8O76064 485 aa16.19■□□□□ 0.18
APOBEC3F-203ENST00000476513 NELFEP18615 380 aaKnown RBP16.19■□□□□ 0.18
APOBEC3F-203ENST00000476513 POU3F2P20265 443 aaPredicted RBP16.19■□□□□ 0.18
APOBEC3F-203ENST00000476513 CAPZBP47756 277 aa16.19■□□□□ 0.18
APOBEC3F-203ENST00000476513 CDH6P55285 790 aa16.19■□□□□ 0.18
APOBEC3F-203ENST00000476513 KRT31Q15323 416 aa16.19■□□□□ 0.18
APOBEC3F-203ENST00000476513 C1QL3Q5VWW1 255 aa16.19■□□□□ 0.18
APOBEC3F-203ENST00000476513 PLEKHA7Q6IQ23 1121 aa16.19■□□□□ 0.18
APOBEC3F-203ENST00000476513 FAM92BQ6ZTR7 304 aa16.19■□□□□ 0.18
APOBEC3F-203ENST00000476513 SYVN1Q86TM6 617 aa16.19■□□□□ 0.18
APOBEC3F-203ENST00000476513 TRIM48Q8IWZ4 208 aa16.19■□□□□ 0.18
APOBEC3F-203ENST00000476513 SRRM1Q8IYB3 904 aaKnown RBP16.19■□□□□ 0.18
APOBEC3F-203ENST00000476513 TEX26Q8N6G2 289 aa16.19■□□□□ 0.18
APOBEC3F-203ENST00000476513 ZDHHC12Q96GR4 267 aa16.19■□□□□ 0.18
APOBEC3F-203ENST00000476513 FAM83DQ9H4H8 585 aa16.19■□□□□ 0.18
APOBEC3F-203ENST00000476513 PDE7BQ9NP56 450 aa16.19■□□□□ 0.18
APOBEC3F-203ENST00000476513 MAP10Q9P2G4 905 aa16.19■□□□□ 0.18
APOBEC3F-203ENST00000476513 SLC23A2Q9UGH3 650 aa16.19■□□□□ 0.18
APOBEC3F-203ENST00000476513 CHKBQ9Y259 395 aa16.19■□□□□ 0.18
APOBEC3F-203ENST00000476513 TMEM191CA6NGB0 347 aa16.18■□□□□ 0.18
APOBEC3F-203ENST00000476513 DPM1O60762 260 aa16.18■□□□□ 0.18
APOBEC3F-203ENST00000476513 CEACAM4O75871 244 aa16.18■□□□□ 0.18
APOBEC3F-203ENST00000476513 PRLP01236 227 aa16.18■□□□□ 0.18
APOBEC3F-203ENST00000476513 VARSP26640 1264 aaKnown RBP16.18■□□□□ 0.18
APOBEC3F-203ENST00000476513 ARL4AP40617 200 aa16.18■□□□□ 0.18
APOBEC3F-203ENST00000476513 SPINT3P49223 89 aa16.18■□□□□ 0.18
APOBEC3F-203ENST00000476513 RPS15P62841 145 aaKnown RBP16.18■□□□□ 0.18
APOBEC3F-203ENST00000476513 ITKQ08881 620 aa16.18■□□□□ 0.18
APOBEC3F-203ENST00000476513 TUBB3Q13509 450 aa16.18■□□□□ 0.18
APOBEC3F-203ENST00000476513 FKBP15Q5T1M5 1219 aa16.18■□□□□ 0.18
APOBEC3F-203ENST00000476513 ZNF648Q5T619 568 aaPredicted RBP16.18■□□□□ 0.18
APOBEC3F-203ENST00000476513 SLC6A19Q695T7 634 aa16.18■□□□□ 0.18
APOBEC3F-203ENST00000476513 IRGCQ6NXR0 463 aa16.18■□□□□ 0.18
APOBEC3F-203ENST00000476513 CYB5D1Q6P9G0 228 aa16.18■□□□□ 0.18
APOBEC3F-203ENST00000476513 POLNQ7Z5Q5 900 aa16.18■□□□□ 0.18
APOBEC3F-203ENST00000476513 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.18■□□□□ 0.18
APOBEC3F-203ENST00000476513 C19orf60Q96EN9 201 aa16.18■□□□□ 0.18
APOBEC3F-203ENST00000476513 FCRL4Q96PJ5 515 aa16.18■□□□□ 0.18
APOBEC3F-203ENST00000476513 LYSMD1Q96S90 227 aa16.18■□□□□ 0.18
APOBEC3F-203ENST00000476513 OR2AG1Q9H205 316 aa16.18■□□□□ 0.18
APOBEC3F-203ENST00000476513 ARFGAP3Q9NP61 516 aa16.18■□□□□ 0.18
APOBEC3F-203ENST00000476513 EPHA6Q9UF33 1036 aa16.18■□□□□ 0.18
APOBEC3F-203ENST00000476513 RARRES3Q9UL19 164 aa16.18■□□□□ 0.18
APOBEC3F-203ENST00000476513 FARSAQ9Y285 508 aaKnown RBP16.18■□□□□ 0.18
APOBEC3F-203ENST00000476513 PCDHGB7Q9Y5F8 929 aa16.18■□□□□ 0.18
APOBEC3F-203ENST00000476513 LRBAP50851 2863 aa16.17■□□□□ 0.18
APOBEC3F-203ENST00000476513 KRT86O43790 486 aa16.17■□□□□ 0.18
APOBEC3F-203ENST00000476513 FOLR1P15328 257 aa16.17■□□□□ 0.18
APOBEC3F-203ENST00000476513 ELAVL4P26378 380 aaKnown RBP16.17■□□□□ 0.18
APOBEC3F-203ENST00000476513 IL1R2P27930 398 aa16.17■□□□□ 0.18
APOBEC3F-203ENST00000476513 PTGIRP43119 386 aa16.17■□□□□ 0.18
APOBEC3F-203ENST00000476513 KCNAB1Q14722 419 aa16.17■□□□□ 0.18
APOBEC3F-203ENST00000476513 SEPT7Q16181 437 aaKnown RBP16.17■□□□□ 0.18
APOBEC3F-203ENST00000476513 DPYSL2Q16555 572 aa16.17■□□□□ 0.18
APOBEC3F-203ENST00000476513 CRTC3Q6UUV7 619 aa16.17■□□□□ 0.18
APOBEC3F-203ENST00000476513 RBMXL3Q8N7X1 1067 aaKnown RBP16.17■□□□□ 0.18
APOBEC3F-203ENST00000476513 LPCAT1Q8NF37 534 aa16.17■□□□□ 0.18
APOBEC3F-203ENST00000476513 SLC41A2Q96JW4 573 aa16.17■□□□□ 0.18
APOBEC3F-203ENST00000476513 CSPG4P5Q96PW8 444 aa16.17■□□□□ 0.18
APOBEC3F-203ENST00000476513 TDRD1Q9BXT4 1180 aaKnown RBP16.17■□□□□ 0.18
APOBEC3F-203ENST00000476513 POLR1EQ9GZS1 481 aaKnown RBP16.17■□□□□ 0.18
APOBEC3F-203ENST00000476513 SLC40A1Q9NP59 571 aa16.17■□□□□ 0.18
APOBEC3F-203ENST00000476513 POT1Q9NUX5 634 aa16.17■□□□□ 0.18
APOBEC3F-203ENST00000476513 SEMA5BQ9P283 1151 aa16.17■□□□□ 0.18
APOBEC3F-203ENST00000476513 IGHV5-51A0A0C4DH38 117 aa16.16■□□□□ 0.18
APOBEC3F-203ENST00000476513 C1orf232A0A0U1RR37 186 aa16.16■□□□□ 0.18
APOBEC3F-203ENST00000476513 PDZK1P1A8MUH7 402 aa16.16■□□□□ 0.18
APOBEC3F-203ENST00000476513 TMCO5BA8MYB1 307 aa16.16■□□□□ 0.18
APOBEC3F-203ENST00000476513 MTA2O94776 668 aa16.16■□□□□ 0.18
APOBEC3F-203ENST00000476513 ATP1A3P13637 1013 aa16.16■□□□□ 0.18
APOBEC3F-203ENST00000476513 BRAFP15056 766 aa16.16■□□□□ 0.18
APOBEC3F-203ENST00000476513 LPOP22079 712 aaPredicted RBP16.16■□□□□ 0.18
APOBEC3F-203ENST00000476513 PPP1CAP62136 330 aa16.16■□□□□ 0.18
APOBEC3F-203ENST00000476513 UBE2HP62256 183 aa16.16■□□□□ 0.18
APOBEC3F-203ENST00000476513 DSC2Q02487 901 aa16.16■□□□□ 0.18
APOBEC3F-203ENST00000476513 GPR18Q14330 331 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms