RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 UGT1A6P19224 532 aa20.9■□□□□ 0.94
LIME1-204ENST00000476183 UGT1A1P22309 533 aa20.9■□□□□ 0.94
LIME1-204ENST00000476183 UGT1A4P22310 534 aa20.9■□□□□ 0.94
LIME1-204ENST00000476183 ALDH4A1P30038 563 aa20.9■□□□□ 0.94
LIME1-204ENST00000476183 UGT1A3P35503 534 aa20.9■□□□□ 0.94
LIME1-204ENST00000476183 UGT1A5P35504 534 aa20.9■□□□□ 0.94
LIME1-204ENST00000476183 ACTN2P35609 894 aa20.9■□□□□ 0.94
LIME1-204ENST00000476183 EIF2S3P41091 472 aaKnown RBP20.9■□□□□ 0.94
LIME1-204ENST00000476183 AMZ1Q400G9 498 aa20.9■□□□□ 0.94
LIME1-204ENST00000476183 SEL1L2Q5TEA6 688 aa20.9■□□□□ 0.94
LIME1-204ENST00000476183 ZDHHC20Q5W0Z9 365 aa20.9■□□□□ 0.94
LIME1-204ENST00000476183 KCTD11Q693B1 232 aa20.9■□□□□ 0.94
LIME1-204ENST00000476183 ARHGEF18Q6ZSZ5 1173 aa20.9■□□□□ 0.94
LIME1-204ENST00000476183 ZNF547Q8IVP9 402 aa20.9■□□□□ 0.94
LIME1-204ENST00000476183 SFRP1Q8N474 314 aa20.9■□□□□ 0.94
LIME1-204ENST00000476183 DTX3LQ8TDB6 740 aa20.9■□□□□ 0.94
LIME1-204ENST00000476183 HNRNPLLQ8WVV9 542 aaKnown RBP20.9■□□□□ 0.94
LIME1-204ENST00000476183 TBL1YQ9BQ87 522 aa20.9■□□□□ 0.94
LIME1-204ENST00000476183 UGT1A7Q9HAW7 530 aa20.9■□□□□ 0.94
LIME1-204ENST00000476183 UGT1A10Q9HAW8 530 aa20.9■□□□□ 0.94
LIME1-204ENST00000476183 UGT1A8Q9HAW9 530 aa20.9■□□□□ 0.94
LIME1-204ENST00000476183 EPB41L5Q9HCM4 733 aa20.9■□□□□ 0.94
LIME1-204ENST00000476183 RALYQ9UKM9 306 aaKnown RBP20.9■□□□□ 0.94
LIME1-204ENST00000476183 PKP3Q9Y446 797 aa20.9■□□□□ 0.94
LIME1-204ENST00000476183 CCDC187A0A096LP49 1063 aa20.89■□□□□ 0.93
LIME1-204ENST00000476183 GLYATL1P3A0A0U1RQE8 302 aa20.89■□□□□ 0.93
LIME1-204ENST00000476183 GPR89AB7ZAQ6 455 aa20.89■□□□□ 0.93
LIME1-204ENST00000476183 STX7O15400 261 aaKnown RBP20.89■□□□□ 0.93
LIME1-204ENST00000476183 ZNF189O75820 626 aaPredicted RBP20.89■□□□□ 0.93
LIME1-204ENST00000476183 GPR89BP0CG08 455 aa20.89■□□□□ 0.93
LIME1-204ENST00000476183 CCKBRP32239 447 aa20.89■□□□□ 0.93
LIME1-204ENST00000476183 INHBCP55103 352 aa20.89■□□□□ 0.93
LIME1-204ENST00000476183 ZFP36L1Q07352 338 aaKnown RBP20.89■□□□□ 0.93
LIME1-204ENST00000476183 RPS6KA1Q15418 735 aa20.89■□□□□ 0.93
LIME1-204ENST00000476183 TAF1AQ15573 450 aaPredicted RBP20.89■□□□□ 0.93
LIME1-204ENST00000476183 PARP6Q2NL67 630 aa20.89■□□□□ 0.93
LIME1-204ENST00000476183 PLA2G4EQ3MJ16 856 aa20.89■□□□□ 0.93
LIME1-204ENST00000476183 SLC13A5Q86YT5 568 aaPredicted RBP20.89■□□□□ 0.93
LIME1-204ENST00000476183 LSMEM2Q8N112 164 aa20.89■□□□□ 0.93
LIME1-204ENST00000476183 WDR36Q8NI36 951 aaKnown RBP20.89■□□□□ 0.93
LIME1-204ENST00000476183 LIN37Q96GY3 246 aaPredicted RBP20.89■□□□□ 0.93
LIME1-204ENST00000476183 ZNF578Q96N58 590 aaPredicted RBP20.89■□□□□ 0.93
LIME1-204ENST00000476183 RDH14Q9HBH5 336 aa20.89■□□□□ 0.93
LIME1-204ENST00000476183 KLC4Q9NSK0 619 aa20.89■□□□□ 0.93
LIME1-204ENST00000476183 PCDHGA8Q9Y5G5 932 aa20.89■□□□□ 0.93
LIME1-204ENST00000476183 ZNF106Q9H2Y7 1883 aaKnown RBP20.89■□□□□ 0.93
LIME1-204ENST00000476183 PTPRQQ9UMZ3 2332 aa20.88■□□□□ 0.93
LIME1-204ENST00000476183 VEGFDO43915 354 aa20.88■□□□□ 0.93
LIME1-204ENST00000476183 SNX2O60749 519 aa20.88■□□□□ 0.93
LIME1-204ENST00000476183 PPFIA2O75334 1257 aa20.88■□□□□ 0.93
LIME1-204ENST00000476183 CDK14O94921 469 aa20.88■□□□□ 0.93
LIME1-204ENST00000476183 LPOP22079 712 aaPredicted RBP20.88■□□□□ 0.93
LIME1-204ENST00000476183 CD1CP29017 333 aa20.88■□□□□ 0.93
LIME1-204ENST00000476183 GPR3P46089 330 aa20.88■□□□□ 0.93
LIME1-204ENST00000476183 FASLGP48023 281 aa20.88■□□□□ 0.93
LIME1-204ENST00000476183 CLCNKAP51800 687 aa20.88■□□□□ 0.93
LIME1-204ENST00000476183 TMEM115Q12893 351 aaPredicted RBP20.88■□□□□ 0.93
LIME1-204ENST00000476183 BIRC2Q13490 618 aa20.88■□□□□ 0.93
LIME1-204ENST00000476183 OASLQ15646 514 aaKnown RBP20.88■□□□□ 0.93
LIME1-204ENST00000476183 IYDQ6PHW0 289 aa20.88■□□□□ 0.93
LIME1-204ENST00000476183 FOXR1Q6PIV2 292 aa20.88■□□□□ 0.93
LIME1-204ENST00000476183 IGF2-ASQ6U949 168 aa20.88■□□□□ 0.93
LIME1-204ENST00000476183 LRRTM4Q86VH4 590 aa20.88■□□□□ 0.93
LIME1-204ENST00000476183 ZNF761Q86XN6 746 aaPredicted RBP20.88■□□□□ 0.93
LIME1-204ENST00000476183 SLITRK4Q8IW52 837 aa20.88■□□□□ 0.93
LIME1-204ENST00000476183 OR4K2Q8NGD2 314 aa20.88■□□□□ 0.93
LIME1-204ENST00000476183 UBE2Q2Q8WVN8 375 aa20.88■□□□□ 0.93
LIME1-204ENST00000476183 RTP4Q96DX8 246 aa20.88■□□□□ 0.93
LIME1-204ENST00000476183 SLC46A1Q96NT5 459 aa20.88■□□□□ 0.93
LIME1-204ENST00000476183 PPP1R2P1Q96PQ5 205 aa20.88■□□□□ 0.93
LIME1-204ENST00000476183 NUDT22Q9BRQ3 303 aa20.88■□□□□ 0.93
LIME1-204ENST00000476183 ARNT2Q9HBZ2 717 aa20.88■□□□□ 0.93
LIME1-204ENST00000476183 PRDM8Q9NQV8 689 aa20.88■□□□□ 0.93
LIME1-204ENST00000476183 PRR19A6NJB7 356 aa20.87■□□□□ 0.93
LIME1-204ENST00000476183 LIASO43766 372 aa20.87■□□□□ 0.93
LIME1-204ENST00000476183 ZNF7P17097 686 aaPredicted RBP20.87■□□□□ 0.93
LIME1-204ENST00000476183 ITPKBP27987 946 aa20.87■□□□□ 0.93
LIME1-204ENST00000476183 COL28A1Q2UY09 1125 aa20.87■□□□□ 0.93
LIME1-204ENST00000476183 CHCHD2P9Q5T1J5 151 aaPredicted RBP20.87■□□□□ 0.93
LIME1-204ENST00000476183 NKAIN2Q5VXU1 208 aa20.87■□□□□ 0.93
LIME1-204ENST00000476183 ZNF574Q6ZN55 896 aaPredicted RBP20.87■□□□□ 0.93
LIME1-204ENST00000476183 USP53Q70EK8 1073 aa20.87■□□□□ 0.93
LIME1-204ENST00000476183 C11orf96Q7Z7L8 435 aa20.87■□□□□ 0.93
LIME1-204ENST00000476183 TAB3Q8N5C8 712 aaPredicted RBP20.87■□□□□ 0.93
LIME1-204ENST00000476183 GDAP1Q8TB36 358 aa20.87■□□□□ 0.93
LIME1-204ENST00000476183 BRSK1Q8TDC3 778 aa20.87■□□□□ 0.93
LIME1-204ENST00000476183 C1orf54Q8WWF1 131 aa20.87■□□□□ 0.93
LIME1-204ENST00000476183 TMEM74Q96NL1 305 aa20.87■□□□□ 0.93
LIME1-204ENST00000476183 SEMA6CQ9H3T2 930 aa20.87■□□□□ 0.93
LIME1-204ENST00000476183 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.87■□□□□ 0.93
LIME1-204ENST00000476183 FKBPLQ9UIM3 349 aa20.87■□□□□ 0.93
LIME1-204ENST00000476183 IGHV1OR21-1A0A087WYE8 117 aa20.86■□□□□ 0.93
LIME1-204ENST00000476183 C2orf81A6NN90 581 aa20.86■□□□□ 0.93
LIME1-204ENST00000476183 TMX2-CTNND1H3BSU7 103 aa20.86■□□□□ 0.93
LIME1-204ENST00000476183 KMOO15229 486 aa20.86■□□□□ 0.93
LIME1-204ENST00000476183 CPNE6O95741 557 aa20.86■□□□□ 0.93
LIME1-204ENST00000476183 F3P13726 295 aa20.86■□□□□ 0.93
LIME1-204ENST00000476183 HGFP14210 728 aa20.86■□□□□ 0.93
LIME1-204ENST00000476183 ERVPABLB-1P60509 514 aa20.86■□□□□ 0.93
LIME1-204ENST00000476183 CFHR1Q03591 330 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms