RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 GPSM1Q86YR5 675 aa11.45□□□□□ -0.58
U2AF1-209ENST00000475639 FAM126AQ9BYI3 521 aaPredicted RBP11.45□□□□□ -0.58
U2AF1-209ENST00000475639 WDR12Q9GZL7 423 aaKnown RBP11.45□□□□□ -0.58
U2AF1-209ENST00000475639 ATP13A1Q9HD20 1204 aa11.45□□□□□ -0.58
U2AF1-209ENST00000475639 GPRC5CQ9NQ84 441 aa11.45□□□□□ -0.58
U2AF1-209ENST00000475639 CCDC177Q9NQR7 707 aaPredicted RBP11.45□□□□□ -0.58
U2AF1-209ENST00000475639 KLQ9UEF7 1012 aa11.45□□□□□ -0.58
U2AF1-209ENST00000475639 ZMYM5Q9UJ78 669 aa11.45□□□□□ -0.58
U2AF1-209ENST00000475639 PRELID1Q9Y255 219 aa11.45□□□□□ -0.58
U2AF1-209ENST00000475639 RBBP6Q7Z6E9 1792 aaKnown RBP11.45□□□□□ -0.58
U2AF1-209ENST00000475639 TRIM64A6NGJ6 449 aa11.45□□□□□ -0.58
U2AF1-209ENST00000475639 PSMD11O00231 422 aa11.45□□□□□ -0.58
U2AF1-209ENST00000475639 MEIS2O14770 477 aa11.45□□□□□ -0.58
U2AF1-209ENST00000475639 PMM2O15305 246 aa11.45□□□□□ -0.58
U2AF1-209ENST00000475639 KCNH1O95259 989 aa11.45□□□□□ -0.58
U2AF1-209ENST00000475639 CHRNB1P11230 501 aa11.45□□□□□ -0.58
U2AF1-209ENST00000475639 LHX1P48742 406 aa11.45□□□□□ -0.58
U2AF1-209ENST00000475639 UGT2B15P54855 530 aa11.45□□□□□ -0.58
U2AF1-209ENST00000475639 ZNF252P-AS1Q0IIN9 211 aa11.45□□□□□ -0.58
U2AF1-209ENST00000475639 SCRN3Q0VDG4 424 aa11.45□□□□□ -0.58
U2AF1-209ENST00000475639 SMIM5Q71RC9 77 aa11.45□□□□□ -0.58
U2AF1-209ENST00000475639 OAFQ86UD1 273 aa11.45□□□□□ -0.58
U2AF1-209ENST00000475639 PCDH20Q8N6Y1 951 aaKnown RBP11.45□□□□□ -0.58
U2AF1-209ENST00000475639 OR5T3Q8NGG3 340 aa11.45□□□□□ -0.58
U2AF1-209ENST00000475639 LILRB4Q8NHJ6 448 aa11.45□□□□□ -0.58
U2AF1-209ENST00000475639 REXO5Q96IC2 774 aaKnown RBP11.45□□□□□ -0.58
U2AF1-209ENST00000475639 MAELQ96JY0 434 aaKnown RBP11.45□□□□□ -0.58
U2AF1-209ENST00000475639 TEFMQ96QE5 360 aaKnown RBP11.45□□□□□ -0.58
U2AF1-209ENST00000475639 CDK5RAP1Q96SZ6 601 aaKnown RBP11.45□□□□□ -0.58
U2AF1-209ENST00000475639 CNPPD1Q9BV87 410 aa11.45□□□□□ -0.58
U2AF1-209ENST00000475639 NANOGQ9H9S0 305 aa11.45□□□□□ -0.58
U2AF1-209ENST00000475639 LEF1Q9UJU2 399 aaPredicted RBP11.45□□□□□ -0.58
U2AF1-209ENST00000475639 PTBP2Q9UKA9 531 aaKnown RBP11.45□□□□□ -0.58
U2AF1-209ENST00000475639 TBX20Q9UMR3 447 aa11.45□□□□□ -0.58
U2AF1-209ENST00000475639 TRAF6Q9Y4K3 522 aa11.45□□□□□ -0.58
U2AF1-209ENST00000475639 REM1O75628 298 aa11.45□□□□□ -0.58
U2AF1-209ENST00000475639 S100A2P29034 98 aa11.45□□□□□ -0.58
U2AF1-209ENST00000475639 PLK1P53350 603 aa11.45□□□□□ -0.58
U2AF1-209ENST00000475639 ZIK1Q3SY52 487 aaPredicted RBP11.45□□□□□ -0.58
U2AF1-209ENST00000475639 SLC9B1Q4ZJI4 515 aa11.45□□□□□ -0.58
U2AF1-209ENST00000475639 MAMDC4Q6UXC1 1216 aa11.45□□□□□ -0.58
U2AF1-209ENST00000475639 PRR23BQ6ZRT6 265 aa11.45□□□□□ -0.58
U2AF1-209ENST00000475639 TXNRD3Q86VQ6 643 aa11.45□□□□□ -0.58
U2AF1-209ENST00000475639 SLC9A6Q92581 669 aa11.45□□□□□ -0.58
U2AF1-209ENST00000475639 TFAP2CQ92754 450 aa11.45□□□□□ -0.58
U2AF1-209ENST00000475639 MARCH7Q9H992 704 aa11.45□□□□□ -0.58
U2AF1-209ENST00000475639 MARK1Q9P0L2 795 aa11.45□□□□□ -0.58
U2AF1-209ENST00000475639 NARFQ9UHQ1 456 aa11.45□□□□□ -0.58
U2AF1-209ENST00000475639 PRR12Q9ULL5 1215 aa11.45□□□□□ -0.58
U2AF1-209ENST00000475639 SYNPO2Q9UMS6 1093 aa11.45□□□□□ -0.58
U2AF1-209ENST00000475639 PLIN4Q96Q06 1357 aa11.45□□□□□ -0.58
U2AF1-209ENST00000475639 F8VP50 259 aa11.45□□□□□ -0.58
U2AF1-209ENST00000475639 CCNKO75909 580 aa11.45□□□□□ -0.58
U2AF1-209ENST00000475639 STXBP1P61764 594 aaKnown RBP11.45□□□□□ -0.58
U2AF1-209ENST00000475639 SNX29P2Q8IUI4 249 aa11.45□□□□□ -0.58
U2AF1-209ENST00000475639 VAT1Q99536 393 aa11.45□□□□□ -0.58
U2AF1-209ENST00000475639 RHBGQ9H310 441 aa11.45□□□□□ -0.58
U2AF1-209ENST00000475639 ANKMY1Q9P2S6 941 aa11.45□□□□□ -0.58
U2AF1-209ENST00000475639 ZNF536O15090 1300 aa11.44□□□□□ -0.58
U2AF1-209ENST00000475639 LOC110117498-PIK3R3F6TDL0 507 aa11.44□□□□□ -0.58
U2AF1-209ENST00000475639 KPNA3O00505 521 aaPredicted RBP11.44□□□□□ -0.58
U2AF1-209ENST00000475639 CASKO14936 926 aa11.44□□□□□ -0.58
U2AF1-209ENST00000475639 SH3BGRLO75368 114 aa11.44□□□□□ -0.58
U2AF1-209ENST00000475639 IFNGP01579 166 aa11.44□□□□□ -0.58
U2AF1-209ENST00000475639 ATP5F1P24539 256 aaPredicted RBP11.44□□□□□ -0.58
U2AF1-209ENST00000475639 PRKG2Q13237 762 aa11.44□□□□□ -0.58
U2AF1-209ENST00000475639 TYSND1Q2T9J0 566 aa11.44□□□□□ -0.58
U2AF1-209ENST00000475639 LDLRAP1Q5SW96 308 aa11.44□□□□□ -0.58
U2AF1-209ENST00000475639 PAGE2Q7Z2X7 111 aa11.44□□□□□ -0.58
U2AF1-209ENST00000475639 BPHLQ86WA6 291 aaPredicted RBP11.44□□□□□ -0.58
U2AF1-209ENST00000475639 C10orf107Q8IVU9 208 aa11.44□□□□□ -0.58
U2AF1-209ENST00000475639 OR7G1Q8NGA0 311 aa11.44□□□□□ -0.58
U2AF1-209ENST00000475639 STAG3L4Q8TBR4 150 aa11.44□□□□□ -0.58
U2AF1-209ENST00000475639 C1GALT1C1Q96EU7 318 aa11.44□□□□□ -0.58
U2AF1-209ENST00000475639 KLK14Q9P0G3 267 aa11.44□□□□□ -0.58
U2AF1-209ENST00000475639 WRAP73Q9P2S5 460 aaPredicted RBP11.44□□□□□ -0.58
U2AF1-209ENST00000475639 SUCOQ9UBS9 1254 aaKnown RBP11.44□□□□□ -0.58
U2AF1-209ENST00000475639 MLXQ9UH92 298 aa11.44□□□□□ -0.58
U2AF1-209ENST00000475639 PHLPP1O60346 1717 aa11.44□□□□□ -0.58
U2AF1-209ENST00000475639 OR10H3O60404 316 aa11.44□□□□□ -0.58
U2AF1-209ENST00000475639 GCATO75600 419 aa11.44□□□□□ -0.58
U2AF1-209ENST00000475639 GABRB2P47870 512 aa11.44□□□□□ -0.58
U2AF1-209ENST00000475639 CPT1AP50416 773 aa11.44□□□□□ -0.58
U2AF1-209ENST00000475639 CEBPGP53567 150 aa11.44□□□□□ -0.58
U2AF1-209ENST00000475639 VBP1P61758 197 aa11.44□□□□□ -0.58
U2AF1-209ENST00000475639 PTPN11Q06124 597 aaPredicted RBP11.44□□□□□ -0.58
U2AF1-209ENST00000475639 PCLAFQ15004 111 aa11.44□□□□□ -0.58
U2AF1-209ENST00000475639 SPANXN3Q5MJ09 141 aa11.44□□□□□ -0.58
U2AF1-209ENST00000475639 AKAP14Q86UN6 197 aa11.44□□□□□ -0.58
U2AF1-209ENST00000475639 BRSK2Q8IWQ3 736 aa11.44□□□□□ -0.58
U2AF1-209ENST00000475639 CHST13Q8NET6 341 aa11.44□□□□□ -0.58
U2AF1-209ENST00000475639 MAPK15Q8TD08 544 aa11.44□□□□□ -0.58
U2AF1-209ENST00000475639 RCN3Q96D15 328 aa11.44□□□□□ -0.58
U2AF1-209ENST00000475639 GPER1Q99527 375 aa11.44□□□□□ -0.58
U2AF1-209ENST00000475639 CPNE1Q99829 537 aa11.44□□□□□ -0.58
U2AF1-209ENST00000475639 ZNF224Q9NZL3 707 aa11.44□□□□□ -0.58
U2AF1-209ENST00000475639 SNX6Q9UNH7 406 aa11.44□□□□□ -0.58
U2AF1-209ENST00000475639 NCKAP1Q9Y2A7 1128 aa11.44□□□□□ -0.58
U2AF1-209ENST00000475639 SLC27A5Q9Y2P5 690 aa11.44□□□□□ -0.58
U2AF1-209ENST00000475639 MCIDASD6RGH6 385 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms