RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 FPGSQ05932 587 aa9.72□□□□□ -0.85
USP39-214ENST00000474572 NFATC2Q13469 925 aa9.72□□□□□ -0.85
USP39-214ENST00000474572 PCBP2Q15366 365 aaKnown RBP eCLIP9.72□□□□□ -0.85
USP39-214ENST00000474572 TEAD2Q15562 447 aa9.72□□□□□ -0.85
USP39-214ENST00000474572 ZRSR2Q15696 482 aaKnown RBP9.72□□□□□ -0.85
USP39-214ENST00000474572 CCDC6Q16204 474 aa9.72□□□□□ -0.85
USP39-214ENST00000474572 PPP1R3AQ16821 1122 aa9.72□□□□□ -0.85
USP39-214ENST00000474572 MYLK3Q32MK0 819 aa9.72□□□□□ -0.85
USP39-214ENST00000474572 PLPP4Q5VZY2 271 aa9.72□□□□□ -0.85
USP39-214ENST00000474572 CLEC6AQ6EIG7 209 aa9.72□□□□□ -0.85
USP39-214ENST00000474572 GRAMD4Q6IC98 578 aa9.72□□□□□ -0.85
USP39-214ENST00000474572 OGFOD2Q6N063 350 aa9.72□□□□□ -0.85
USP39-214ENST00000474572 PSRC1Q6PGN9 363 aaPredicted RBP9.72□□□□□ -0.85
USP39-214ENST00000474572 HACD2Q6Y1H2 254 aa9.72□□□□□ -0.85
USP39-214ENST00000474572 MACC1Q6ZN28 852 aa9.72□□□□□ -0.85
USP39-214ENST00000474572 BNC2Q6ZN30 1099 aaPredicted RBP9.72□□□□□ -0.85
USP39-214ENST00000474572 TPRG1Q6ZUI0 275 aa9.72□□□□□ -0.85
USP39-214ENST00000474572 EFL1Q7Z2Z2 1120 aaKnown RBP9.72□□□□□ -0.85
USP39-214ENST00000474572 CHCHD4Q8N4Q1 142 aa9.72□□□□□ -0.85
USP39-214ENST00000474572 PDPRQ8NCN5 879 aa9.72□□□□□ -0.85
USP39-214ENST00000474572 OR6K2Q8NGY2 324 aa9.72□□□□□ -0.85
USP39-214ENST00000474572 KCNV2Q8TDN2 545 aa9.72□□□□□ -0.85
USP39-214ENST00000474572 EEF1AKMT1Q8WVE0 214 aa9.72□□□□□ -0.85
USP39-214ENST00000474572 TWIST2Q8WVJ9 160 aa9.72□□□□□ -0.85
USP39-214ENST00000474572 POF1BQ8WVV4 589 aa9.72□□□□□ -0.85
USP39-214ENST00000474572 HERVK_113Q902F9 699 aa9.72□□□□□ -0.85
USP39-214ENST00000474572 EXT2Q93063 718 aa9.72□□□□□ -0.85
USP39-214ENST00000474572 OTUB2Q96DC9 234 aa9.72□□□□□ -0.85
USP39-214ENST00000474572 TCEAL4Q96EI5 215 aa9.72□□□□□ -0.85
USP39-214ENST00000474572 LINGO1Q96FE5 620 aa9.72□□□□□ -0.85
USP39-214ENST00000474572 SCRN2Q96FV2 425 aa9.72□□□□□ -0.85
USP39-214ENST00000474572 MARK4Q96L34 752 aa9.72□□□□□ -0.85
USP39-214ENST00000474572 C3orf30Q96M34 536 aa9.72□□□□□ -0.85
USP39-214ENST00000474572 NSUN5Q96P11 429 aaKnown RBP9.72□□□□□ -0.85
USP39-214ENST00000474572 SERPINI1Q99574 410 aa9.72□□□□□ -0.85
USP39-214ENST00000474572 TNKS2Q9H2K2 1166 aa9.72□□□□□ -0.85
USP39-214ENST00000474572 TUBB1Q9H4B7 451 aa9.72□□□□□ -0.85
USP39-214ENST00000474572 EFCAB1Q9HAE3 211 aa9.72□□□□□ -0.85
USP39-214ENST00000474572 S100A14Q9HCY8 104 aa9.72□□□□□ -0.85
USP39-214ENST00000474572 MID1IP1Q9NPA3 183 aa9.72□□□□□ -0.85
USP39-214ENST00000474572 IL26Q9NPH9 171 aa9.72□□□□□ -0.85
USP39-214ENST00000474572 TLR9Q9NR96 1032 aa9.72□□□□□ -0.85
USP39-214ENST00000474572 NMRK1Q9NWW6 199 aa9.72□□□□□ -0.85
USP39-214ENST00000474572 PLK2Q9NYY3 685 aa9.72□□□□□ -0.85
USP39-214ENST00000474572 CXXC1Q9P0U4 656 aaPredicted RBP9.72□□□□□ -0.85
USP39-214ENST00000474572 KLHL42Q9P2K6 505 aa9.72□□□□□ -0.85
USP39-214ENST00000474572 GNPTGQ9UJJ9 305 aa9.72□□□□□ -0.85
USP39-214ENST00000474572 CCL26Q9Y258 94 aa9.72□□□□□ -0.85
USP39-214ENST00000474572 RWDD3Q9Y3V2 267 aa9.72□□□□□ -0.85
USP39-214ENST00000474572 WASF2Q9Y6W5 498 aa9.72□□□□□ -0.85
USP39-214ENST00000474572 IGLV3-16A0A075B6K0 115 aa9.71□□□□□ -0.86
USP39-214ENST00000474572 GLYATL1P3A0A0U1RQE8 302 aa9.71□□□□□ -0.86
USP39-214ENST00000474572 TSPAN11A1L157 253 aa9.71□□□□□ -0.86
USP39-214ENST00000474572 NPIPB15A6NHN6 443 aaPredicted RBP9.71□□□□□ -0.86
USP39-214ENST00000474572 E5RI56 91 aa9.71□□□□□ -0.86
USP39-214ENST00000474572 E2F3O00716 465 aa9.71□□□□□ -0.86
USP39-214ENST00000474572 PPP6CO00743 305 aa9.71□□□□□ -0.86
USP39-214ENST00000474572 AIM2O14862 343 aa9.71□□□□□ -0.86
USP39-214ENST00000474572 PIP5K1BO14986 540 aa9.71□□□□□ -0.86
USP39-214ENST00000474572 NVLO15381 856 aaKnown RBP9.71□□□□□ -0.86
USP39-214ENST00000474572 GPR39O43194 453 aa9.71□□□□□ -0.86
USP39-214ENST00000474572 VPS4BO75351 444 aa9.71□□□□□ -0.86
USP39-214ENST00000474572 PDE5AO76074 875 aa9.71□□□□□ -0.86
USP39-214ENST00000474572 SORBS2O94875 1100 aaKnown RBP9.71□□□□□ -0.86
USP39-214ENST00000474572 MATN4O95460 622 aa9.71□□□□□ -0.86
USP39-214ENST00000474572 CLDN7O95471 211 aa9.71□□□□□ -0.86
USP39-214ENST00000474572 MLYCDO95822 493 aa9.71□□□□□ -0.86
USP39-214ENST00000474572 RHOP08100 348 aa9.71□□□□□ -0.86
USP39-214ENST00000474572 HSPA8P11142 646 aaKnown RBP9.71□□□□□ -0.86
USP39-214ENST00000474572 PABPC1P11940 636 aaKnown RBP9.71□□□□□ -0.86
USP39-214ENST00000474572 ARSAP15289 507 aa9.71□□□□□ -0.86
USP39-214ENST00000474572 TSPAN8P19075 237 aa9.71□□□□□ -0.86
USP39-214ENST00000474572 GPX3P22352 226 aa9.71□□□□□ -0.86
USP39-214ENST00000474572 CTNNB1P35222 781 aa9.71□□□□□ -0.86
USP39-214ENST00000474572 STK19P49842 368 aaPredicted RBP9.71□□□□□ -0.86
USP39-214ENST00000474572 CCNHP51946 323 aaPredicted RBP9.71□□□□□ -0.86
USP39-214ENST00000474572 GTF2A1P52655 376 aaPredicted RBP9.71□□□□□ -0.86
USP39-214ENST00000474572 FOXA1P55317 472 aa9.71□□□□□ -0.86
USP39-214ENST00000474572 PKNOX1P55347 436 aa9.71□□□□□ -0.86
USP39-214ENST00000474572 GRIK2Q13002 908 aa9.71□□□□□ -0.86
USP39-214ENST00000474572 STX5Q13190 355 aa9.71□□□□□ -0.86
USP39-214ENST00000474572 LRP8Q14114 963 aa9.71□□□□□ -0.86
USP39-214ENST00000474572 FASTKQ14296 549 aaKnown RBP9.71□□□□□ -0.86
USP39-214ENST00000474572 TGFBIQ15582 683 aa9.71□□□□□ -0.86
USP39-214ENST00000474572 ZNF423Q2M1K9 1284 aa9.71□□□□□ -0.86
USP39-214ENST00000474572 ARHGAP15Q53QZ3 475 aa9.71□□□□□ -0.86
USP39-214ENST00000474572 CARD16Q5EG05 197 aa9.71□□□□□ -0.86
USP39-214ENST00000474572 XKR7Q5GH72 579 aa9.71□□□□□ -0.86
USP39-214ENST00000474572 ELMSAN1Q6PJG2 1045 aa9.71□□□□□ -0.86
USP39-214ENST00000474572 CRTC1Q6UUV9 634 aa9.71□□□□□ -0.86
USP39-214ENST00000474572 SBSNQ6UWP8 590 aa9.71□□□□□ -0.86
USP39-214ENST00000474572 GK5Q6ZS86 529 aa9.71□□□□□ -0.86
USP39-214ENST00000474572 RNF165Q6ZSG1 346 aa9.71□□□□□ -0.86
USP39-214ENST00000474572 TAS2R42Q7RTR8 314 aa9.71□□□□□ -0.86
USP39-214ENST00000474572 ADAMTSL2Q86TH1 951 aa9.71□□□□□ -0.86
USP39-214ENST00000474572 KBTBD6Q86V97 674 aa9.71□□□□□ -0.86
USP39-214ENST00000474572 TMEM25Q86YD3 366 aa9.71□□□□□ -0.86
USP39-214ENST00000474572 HPS6Q86YV9 775 aa9.71□□□□□ -0.86
USP39-214ENST00000474572 LKAAEAR1Q8TD35 194 aa9.71□□□□□ -0.86
USP39-214ENST00000474572 DTX3LQ8TDB6 740 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms