RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 POC1AQ8NBT0 407 aa3.21□□□□□ -1.9
ECHDC1-213ENST00000474240 OR2AK2Q8NG84 335 aa3.21□□□□□ -1.9
ECHDC1-213ENST00000474240 SORCS1Q8WY21 1168 aa3.21□□□□□ -1.9
ECHDC1-213ENST00000474240 ABTB1Q969K4 478 aaPredicted RBP3.21□□□□□ -1.9
ECHDC1-213ENST00000474240 GRAMD2BQ96HH9 432 aa3.21□□□□□ -1.9
ECHDC1-213ENST00000474240 CMKLR1Q99788 373 aa3.21□□□□□ -1.9
ECHDC1-213ENST00000474240 ABCF3Q9NUQ8 709 aa3.21□□□□□ -1.9
ECHDC1-213ENST00000474240 GAGE2DQ9UEU5 116 aa3.21□□□□□ -1.9
ECHDC1-213ENST00000474240 POLG2Q9UHN1 485 aa3.21□□□□□ -1.9
ECHDC1-213ENST00000474240 DBNLQ9UJU6 430 aaKnown RBP3.21□□□□□ -1.9
ECHDC1-213ENST00000474240 DLGAP4Q9Y2H0 992 aa3.21□□□□□ -1.9
ECHDC1-213ENST00000474240 KLHL20Q9Y2M5 609 aa3.21□□□□□ -1.9
ECHDC1-213ENST00000474240 C1orf226A1L170 272 aa3.2□□□□□ -1.9
ECHDC1-213ENST00000474240 FSD2A1L4K1 749 aa3.2□□□□□ -1.9
ECHDC1-213ENST00000474240 FRMD3A2A2Y4 597 aa3.2□□□□□ -1.9
ECHDC1-213ENST00000474240 FAM172BPA6NC97 362 aa3.2□□□□□ -1.9
ECHDC1-213ENST00000474240 ASPDHA6ND91 283 aa3.2□□□□□ -1.9
ECHDC1-213ENST00000474240 ZNF587BE7ETH6 402 aa3.2□□□□□ -1.9
ECHDC1-213ENST00000474240 TULP2O00295 520 aa3.2□□□□□ -1.9
ECHDC1-213ENST00000474240 ZNHIT1O43257 154 aa3.2□□□□□ -1.9
ECHDC1-213ENST00000474240 PTP4A3O75365 173 aa3.2□□□□□ -1.9
ECHDC1-213ENST00000474240 PDE9AO76083 593 aa3.2□□□□□ -1.9
ECHDC1-213ENST00000474240 RB1P06400 928 aa3.2□□□□□ -1.9
ECHDC1-213ENST00000474240 CETPP11597 493 aa3.2□□□□□ -1.9
ECHDC1-213ENST00000474240 ALOX12P18054 663 aa3.2□□□□□ -1.9
ECHDC1-213ENST00000474240 PON1P27169 355 aa3.2□□□□□ -1.9
ECHDC1-213ENST00000474240 ACADLP28330 430 aa3.2□□□□□ -1.9
ECHDC1-213ENST00000474240 CORO1AP31146 461 aaKnown RBP3.2□□□□□ -1.9
ECHDC1-213ENST00000474240 DRG2P55039 364 aaKnown RBP3.2□□□□□ -1.9
ECHDC1-213ENST00000474240 RELQ04864 619 aaPredicted RBP3.2□□□□□ -1.9
ECHDC1-213ENST00000474240 ILF3Q12906 894 aaKnown RBP eCLIP3.2□□□□□ -1.9
ECHDC1-213ENST00000474240 IKQ13123 557 aaPredicted RBP3.2□□□□□ -1.9
ECHDC1-213ENST00000474240 GTF2H2Q13888 395 aa3.2□□□□□ -1.9
ECHDC1-213ENST00000474240 RALBP1Q15311 655 aa3.2□□□□□ -1.9
ECHDC1-213ENST00000474240 ASTE1Q2TB18 679 aaPredicted RBP3.2□□□□□ -1.9
ECHDC1-213ENST00000474240 ZNF718Q3SXZ3 478 aa3.2□□□□□ -1.9
ECHDC1-213ENST00000474240 C9orf50Q5SZB4 431 aa3.2□□□□□ -1.9
ECHDC1-213ENST00000474240 PDSS1Q5T2R2 415 aa3.2□□□□□ -1.9
ECHDC1-213ENST00000474240 GPATCH4Q5T3I0 446 aaKnown RBP3.2□□□□□ -1.9
ECHDC1-213ENST00000474240 SPATA1Q5VX52 437 aa3.2□□□□□ -1.9
ECHDC1-213ENST00000474240 ZDHHC20Q5W0Z9 365 aa3.2□□□□□ -1.9
ECHDC1-213ENST00000474240 PMS2CLQ68D20 193 aa3.2□□□□□ -1.9
ECHDC1-213ENST00000474240 FAM109BQ6ICB4 259 aaPredicted RBP3.2□□□□□ -1.9
ECHDC1-213ENST00000474240 GTF2H2CQ6P1K8 395 aa3.2□□□□□ -1.9
ECHDC1-213ENST00000474240 GFRALQ6UXV0 394 aa3.2□□□□□ -1.9
ECHDC1-213ENST00000474240 GDPD4Q6W3E5 623 aa3.2□□□□□ -1.9
ECHDC1-213ENST00000474240 BRINP3Q76B58 766 aa3.2□□□□□ -1.9
ECHDC1-213ENST00000474240 CHST9Q7L1S5 443 aa3.2□□□□□ -1.9
ECHDC1-213ENST00000474240 SDCCAG8Q86SQ7 713 aaPredicted RBP3.2□□□□□ -1.9
ECHDC1-213ENST00000474240 CCDC190Q86UF4 302 aa3.2□□□□□ -1.9
ECHDC1-213ENST00000474240 TMEM219Q86XT9 240 aa3.2□□□□□ -1.9
ECHDC1-213ENST00000474240 MAB21L3Q8N8X9 362 aa3.2□□□□□ -1.9
ECHDC1-213ENST00000474240 ZNF441Q8N8Z8 693 aa3.2□□□□□ -1.9
ECHDC1-213ENST00000474240 LMNTD1Q8N9Z9 388 aa3.2□□□□□ -1.9
ECHDC1-213ENST00000474240 SLC38A9Q8NBW4 561 aa3.2□□□□□ -1.9
ECHDC1-213ENST00000474240 OR8K5Q8NH50 307 aa3.2□□□□□ -1.9
ECHDC1-213ENST00000474240 HM13Q8TCT9 377 aa3.2□□□□□ -1.9
ECHDC1-213ENST00000474240 UTP15Q8TED0 518 aaKnown RBP3.2□□□□□ -1.9
ECHDC1-213ENST00000474240 SCRN2Q96FV2 425 aa3.2□□□□□ -1.9
ECHDC1-213ENST00000474240 ABHD8Q96I13 439 aa3.2□□□□□ -1.9
ECHDC1-213ENST00000474240 TTC14Q96N46 770 aa3.2□□□□□ -1.9
ECHDC1-213ENST00000474240 WDFY2Q96P53 400 aa3.2□□□□□ -1.9
ECHDC1-213ENST00000474240 OR2A14Q96R47 310 aa3.2□□□□□ -1.9
ECHDC1-213ENST00000474240 EPYCQ99645 322 aa3.2□□□□□ -1.9
ECHDC1-213ENST00000474240 CHCHD6Q9BRQ6 235 aa3.2□□□□□ -1.9
ECHDC1-213ENST00000474240 SEBOXQ9HB31 216 aaPredicted RBP3.2□□□□□ -1.9
ECHDC1-213ENST00000474240 PLSCR4Q9NRQ2 329 aa3.2□□□□□ -1.9
ECHDC1-213ENST00000474240 SEPT11Q9NVA2 429 aaKnown RBP3.2□□□□□ -1.9
ECHDC1-213ENST00000474240 FAM118AQ9NWS6 357 aa3.2□□□□□ -1.9
ECHDC1-213ENST00000474240 TRMT1Q9NXH9 659 aaKnown RBP3.2□□□□□ -1.9
ECHDC1-213ENST00000474240 R3HDM2Q9Y2K5 976 aaKnown RBP3.2□□□□□ -1.9
ECHDC1-213ENST00000474240 CMAHPQ9Y471 501 aa3.2□□□□□ -1.9
ECHDC1-213ENST00000474240 LOC100509620A0A075B734 347 aa3.19□□□□□ -1.9
ECHDC1-213ENST00000474240 PRAC2D3DTV9 90 aa3.19□□□□□ -1.9
ECHDC1-213ENST00000474240 PTGES3LE9PB15 166 aa3.19□□□□□ -1.9
ECHDC1-213ENST00000474240 IFNL4K9M1U5 179 aa3.19□□□□□ -1.9
ECHDC1-213ENST00000474240 VILLO15195 856 aa3.19□□□□□ -1.9
ECHDC1-213ENST00000474240 DDNO94850 711 aaPredicted RBP3.19□□□□□ -1.9
ECHDC1-213ENST00000474240 OR2C1O95371 312 aa3.19□□□□□ -1.9
ECHDC1-213ENST00000474240 GH2P01242 217 aa3.19□□□□□ -1.9
ECHDC1-213ENST00000474240 ICAM1P05362 532 aa3.19□□□□□ -1.9
ECHDC1-213ENST00000474240 CDH1P12830 882 aa3.19□□□□□ -1.9
ECHDC1-213ENST00000474240 ANXA7P20073 488 aaKnown RBP3.19□□□□□ -1.9
ECHDC1-213ENST00000474240 KCNA5P22460 613 aa3.19□□□□□ -1.9
ECHDC1-213ENST00000474240 NR2F2P24468 414 aa3.19□□□□□ -1.9
ECHDC1-213ENST00000474240 AHRP35869 848 aa3.19□□□□□ -1.9
ECHDC1-213ENST00000474240 AMPHP49418 695 aa3.19□□□□□ -1.9
ECHDC1-213ENST00000474240 CLCN3P51790 818 aa3.19□□□□□ -1.9
ECHDC1-213ENST00000474240 PRKG2Q13237 762 aa3.19□□□□□ -1.9
ECHDC1-213ENST00000474240 ACVR2BQ13705 512 aa3.19□□□□□ -1.9
ECHDC1-213ENST00000474240 SIM2Q14190 667 aaPredicted RBP3.19□□□□□ -1.9
ECHDC1-213ENST00000474240 C15orf59Q2T9L4 293 aaPredicted RBP3.19□□□□□ -1.9
ECHDC1-213ENST00000474240 ASPRV1Q53RT3 343 aa3.19□□□□□ -1.9
ECHDC1-213ENST00000474240 KRTCAP3Q53RY4 240 aa3.19□□□□□ -1.9
ECHDC1-213ENST00000474240 HIST2H2BCQ6DN03 193 aa3.19□□□□□ -1.9
ECHDC1-213ENST00000474240 HIST2H2BDQ6DRA6 164 aa3.19□□□□□ -1.9
ECHDC1-213ENST00000474240 ZNF280DQ6N043 979 aa3.19□□□□□ -1.9
ECHDC1-213ENST00000474240 ASB18Q6ZVZ8 466 aa3.19□□□□□ -1.9
ECHDC1-213ENST00000474240 ZNF34Q8IZ26 560 aa3.19□□□□□ -1.9
ECHDC1-213ENST00000474240 TTC39CQ8N584 583 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms