RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 ZDHHC20Q5W0Z9 365 aa10.26□□□□□ -0.77
CASC3-204ENST00000474190 AFTPHQ6ULP2 937 aa10.26□□□□□ -0.77
CASC3-204ENST00000474190 CYS1Q717R9 158 aa10.26□□□□□ -0.77
CASC3-204ENST00000474190 PTAR1Q7Z6K3 402 aaPredicted RBP10.26□□□□□ -0.77
CASC3-204ENST00000474190 SERPINA9Q86WD7 417 aa10.26□□□□□ -0.77
CASC3-204ENST00000474190 NRROSQ86YC3 692 aa10.26□□□□□ -0.77
CASC3-204ENST00000474190 DENND6AQ8IWF6 608 aa10.26□□□□□ -0.77
CASC3-204ENST00000474190 KIAA2013Q8IYS2 634 aa10.26□□□□□ -0.77
CASC3-204ENST00000474190 DCLK2Q8N568 766 aa10.26□□□□□ -0.77
CASC3-204ENST00000474190 RASGEF1AQ8N9B8 481 aa10.26□□□□□ -0.77
CASC3-204ENST00000474190 OR2I1PQ8NGU4 316 aa10.26□□□□□ -0.77
CASC3-204ENST00000474190 OR4L1Q8NH43 312 aa10.26□□□□□ -0.77
CASC3-204ENST00000474190 RUBCNQ92622 972 aa10.26□□□□□ -0.77
CASC3-204ENST00000474190 PDXPQ96GD0 296 aa10.26□□□□□ -0.77
CASC3-204ENST00000474190 HIC2Q96JB3 615 aa10.26□□□□□ -0.77
CASC3-204ENST00000474190 BIRC8Q96P09 236 aa10.26□□□□□ -0.77
CASC3-204ENST00000474190 P2RY12Q9H244 342 aa10.26□□□□□ -0.77
CASC3-204ENST00000474190 CDC42EP4Q9H3Q1 356 aaKnown RBP10.26□□□□□ -0.77
CASC3-204ENST00000474190 ASB8Q9H765 288 aa10.26□□□□□ -0.77
CASC3-204ENST00000474190 WDR26Q9H7D7 661 aa10.26□□□□□ -0.77
CASC3-204ENST00000474190 IL21RQ9HBE5 538 aa10.26□□□□□ -0.77
CASC3-204ENST00000474190 MRPL40Q9NQ50 206 aaKnown RBP10.26□□□□□ -0.77
CASC3-204ENST00000474190 RAD18Q9NS91 495 aa10.26□□□□□ -0.77
CASC3-204ENST00000474190 TM7SF3Q9NS93 570 aa10.26□□□□□ -0.77
CASC3-204ENST00000474190 KCTD5Q9NXV2 234 aa10.26□□□□□ -0.77
CASC3-204ENST00000474190 ATXN10Q9UBB4 475 aa10.26□□□□□ -0.77
CASC3-204ENST00000474190 APPL1Q9UKG1 709 aa10.26□□□□□ -0.77
CASC3-204ENST00000474190 ANKRD6Q9Y2G4 727 aa10.26□□□□□ -0.77
CASC3-204ENST00000474190 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.26□□□□□ -0.77
CASC3-204ENST00000474190 PCDH15Q96QU1 1955 aa10.26□□□□□ -0.77
CASC3-204ENST00000474190 MAP1BP46821 2468 aaKnown RBP10.25□□□□□ -0.77
CASC3-204ENST00000474190 TCRBV9S1A1TA0A576 114 aa10.25□□□□□ -0.77
CASC3-204ENST00000474190 FAM159BA6NKW6 160 aa10.25□□□□□ -0.77
CASC3-204ENST00000474190 CDX4O14627 284 aaPredicted RBP10.25□□□□□ -0.77
CASC3-204ENST00000474190 TOR1BO14657 336 aa10.25□□□□□ -0.77
CASC3-204ENST00000474190 NDC80O14777 642 aa10.25□□□□□ -0.77
CASC3-204ENST00000474190 TTC4O95801 387 aa10.25□□□□□ -0.77
CASC3-204ENST00000474190 POLBP06746 335 aa10.25□□□□□ -0.77
CASC3-204ENST00000474190 CELA2BP08218 269 aaPredicted RBP10.25□□□□□ -0.77
CASC3-204ENST00000474190 SLC1A2P43004 574 aa10.25□□□□□ -0.77
CASC3-204ENST00000474190 GRIK2Q13002 908 aa10.25□□□□□ -0.77
CASC3-204ENST00000474190 LAMB3Q13751 1172 aa10.25□□□□□ -0.77
CASC3-204ENST00000474190 STAT4Q14765 748 aa10.25□□□□□ -0.77
CASC3-204ENST00000474190 SF3A2Q15428 464 aaKnown RBP10.25□□□□□ -0.77
CASC3-204ENST00000474190 KYNUQ16719 465 aa10.25□□□□□ -0.77
CASC3-204ENST00000474190 LONRF1Q17RB8 773 aa10.25□□□□□ -0.77
CASC3-204ENST00000474190 DUOXA1Q1HG43 343 aa10.25□□□□□ -0.77
CASC3-204ENST00000474190 ZNF423Q2M1K9 1284 aa10.25□□□□□ -0.77
CASC3-204ENST00000474190 GPR33Q49SQ1 333 aa10.25□□□□□ -0.77
CASC3-204ENST00000474190 HSP90AA5PQ58FG0 334 aa10.25□□□□□ -0.77
CASC3-204ENST00000474190 ZNF542PQ5EBM4 170 aa10.25□□□□□ -0.77
CASC3-204ENST00000474190 SPANXN3Q5MJ09 141 aa10.25□□□□□ -0.77
CASC3-204ENST00000474190 NEPROQ6NW34 567 aa10.25□□□□□ -0.77
CASC3-204ENST00000474190 CASC4Q6P4E1 433 aa10.25□□□□□ -0.77
CASC3-204ENST00000474190 ZNF549Q6P9A3 640 aa10.25□□□□□ -0.77
CASC3-204ENST00000474190 MACC1Q6ZN28 852 aa10.25□□□□□ -0.77
CASC3-204ENST00000474190 CILP2Q8IUL8 1156 aa10.25□□□□□ -0.77
CASC3-204ENST00000474190 RGL4Q8IZJ4 473 aa10.25□□□□□ -0.77
CASC3-204ENST00000474190 GPR161Q8N6U8 529 aaKnown RBP10.25□□□□□ -0.77
CASC3-204ENST00000474190 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.25□□□□□ -0.77
CASC3-204ENST00000474190 ACVR1CQ8NER5 493 aa10.25□□□□□ -0.77
CASC3-204ENST00000474190 LKAAEAR1Q8TD35 194 aa10.25□□□□□ -0.77
CASC3-204ENST00000474190 LPGAT1Q92604 370 aa10.25□□□□□ -0.77
CASC3-204ENST00000474190 TSACCQ96A04 125 aaPredicted RBP10.25□□□□□ -0.77
CASC3-204ENST00000474190 CERS2Q96G23 380 aa10.25□□□□□ -0.77
CASC3-204ENST00000474190 CFAP36Q96G28 342 aa10.25□□□□□ -0.77
CASC3-204ENST00000474190 KLHDC7BQ96G42 594 aa10.25□□□□□ -0.77
CASC3-204ENST00000474190 NAT9Q9BTE0 207 aa10.25□□□□□ -0.77
CASC3-204ENST00000474190 C1QTNF7Q9BXJ2 289 aa10.25□□□□□ -0.77
CASC3-204ENST00000474190 AASDHPPTQ9NRN7 309 aa10.25□□□□□ -0.77
CASC3-204ENST00000474190 SLC23A2Q9UGH3 650 aa10.25□□□□□ -0.77
CASC3-204ENST00000474190 PLEKHM1Q9Y4G2 1056 aa10.25□□□□□ -0.77
CASC3-204ENST00000474190 SPAG17Q6Q759 2223 aa10.25□□□□□ -0.77
CASC3-204ENST00000474190 LNP1A1A4G5 178 aa10.24□□□□□ -0.77
CASC3-204ENST00000474190 HMX2A2RU54 273 aa10.24□□□□□ -0.77
CASC3-204ENST00000474190 CD3EAPO15446 510 aaKnown RBP10.24□□□□□ -0.77
CASC3-204ENST00000474190 NUAK1O60285 661 aa10.24□□□□□ -0.77
CASC3-204ENST00000474190 LMNAP02545 664 aaKnown RBP10.24□□□□□ -0.77
CASC3-204ENST00000474190 CSF2P04141 144 aa10.24□□□□□ -0.77
CASC3-204ENST00000474190 IVLP07476 585 aa10.24□□□□□ -0.77
CASC3-204ENST00000474190 ZNF806P0C7X5 589 aa10.24□□□□□ -0.77
CASC3-204ENST00000474190 NME1P15531 152 aaKnown RBP10.24□□□□□ -0.77
CASC3-204ENST00000474190 GCAP28676 217 aa10.24□□□□□ -0.77
CASC3-204ENST00000474190 RXRGP48443 463 aa10.24□□□□□ -0.77
CASC3-204ENST00000474190 TUBB4BP68371 445 aa10.24□□□□□ -0.77
CASC3-204ENST00000474190 MPP1Q00013 466 aa10.24□□□□□ -0.77
CASC3-204ENST00000474190 TMEM115Q12893 351 aaPredicted RBP10.24□□□□□ -0.77
CASC3-204ENST00000474190 CTBP1Q13363 440 aa10.24□□□□□ -0.77
CASC3-204ENST00000474190 HLTFQ14527 1009 aaKnown RBP eCLIP10.24□□□□□ -0.779e-6■□□□□ 9.4
CASC3-204ENST00000474190 EFTUD2Q15029 972 aaKnown RBP eCLIP10.24□□□□□ -0.77
CASC3-204ENST00000474190 PYCR3Q53H96 274 aa10.24□□□□□ -0.77
CASC3-204ENST00000474190 TRIM61Q5EBN2 209 aa10.24□□□□□ -0.77
CASC3-204ENST00000474190 ZRANB3Q5FWF4 1079 aa10.24□□□□□ -0.77
CASC3-204ENST00000474190 CTSL3PQ5NE16 218 aa10.24□□□□□ -0.77
CASC3-204ENST00000474190 PACS1Q6VY07 963 aa10.24□□□□□ -0.77
CASC3-204ENST00000474190 KCNMB4Q86W47 210 aa10.24□□□□□ -0.77
CASC3-204ENST00000474190 CCDC25Q86WR0 208 aa10.24□□□□□ -0.77
CASC3-204ENST00000474190 CCNJLQ8IV13 435 aa10.24□□□□□ -0.77
CASC3-204ENST00000474190 RBFAQ8N0V3 343 aa10.24□□□□□ -0.77
CASC3-204ENST00000474190 CLDN19Q8N6F1 224 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms