RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 EIF2S3LQ2VIR3 472 aaKnown RBP5.07□□□□□ -1.6
SNRNP40-204ENST00000474025 PRR30Q53SZ7 412 aaPredicted RBP5.07□□□□□ -1.6
SNRNP40-204ENST00000474025 PAPD7Q5XG87 772 aaKnown RBP5.07□□□□□ -1.6
SNRNP40-204ENST00000474025 LRRC66Q68CR7 880 aa5.07□□□□□ -1.6
SNRNP40-204ENST00000474025 LYSMD3Q7Z3D4 306 aa5.07□□□□□ -1.6
SNRNP40-204ENST00000474025 NLRP8Q86W28 1048 aa5.07□□□□□ -1.6
SNRNP40-204ENST00000474025 LZTR1Q8N653 840 aa5.07□□□□□ -1.6
SNRNP40-204ENST00000474025 ARFGAP1Q8N6T3 406 aa5.07□□□□□ -1.6
SNRNP40-204ENST00000474025 CT55Q8WUE5 264 aa5.07□□□□□ -1.6
SNRNP40-204ENST00000474025 PIH1D2Q8WWB5 315 aa5.07□□□□□ -1.6
SNRNP40-204ENST00000474025 SH3KBP1Q96B97 665 aa5.07□□□□□ -1.6
SNRNP40-204ENST00000474025 C9orf72Q96LT7 481 aa5.07□□□□□ -1.6
SNRNP40-204ENST00000474025 SMIM14Q96QK8 99 aa5.07□□□□□ -1.6
SNRNP40-204ENST00000474025 OR6C1Q96RD1 312 aa5.07□□□□□ -1.6
SNRNP40-204ENST00000474025 PEBP4Q96S96 227 aa5.07□□□□□ -1.6
SNRNP40-204ENST00000474025 KCTD15Q96SI1 283 aaPredicted RBP5.07□□□□□ -1.6
SNRNP40-204ENST00000474025 EIF3CQ99613 913 aaKnown RBP5.07□□□□□ -1.6
SNRNP40-204ENST00000474025 SNRNP25Q9BV90 132 aaKnown RBP5.07□□□□□ -1.6
SNRNP40-204ENST00000474025 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.07□□□□□ -1.6
SNRNP40-204ENST00000474025 TWSG1Q9GZX9 223 aa5.07□□□□□ -1.6
SNRNP40-204ENST00000474025 BRD8Q9H0E9 1235 aa5.07□□□□□ -1.6
SNRNP40-204ENST00000474025 ACTL8Q9H568 366 aa5.07□□□□□ -1.6
SNRNP40-204ENST00000474025 ZNF768Q9H5H4 540 aaKnown RBP5.07□□□□□ -1.6
SNRNP40-204ENST00000474025 DHX35Q9H5Z1 703 aaKnown RBP5.07□□□□□ -1.6
SNRNP40-204ENST00000474025 MLXIPLQ9NP71 852 aa5.07□□□□□ -1.6
SNRNP40-204ENST00000474025 CASS4Q9NQ75 786 aa5.07□□□□□ -1.6
SNRNP40-204ENST00000474025 OGFRQ9NZT2 677 aa5.07□□□□□ -1.6
SNRNP40-204ENST00000474025 VPS18Q9P253 973 aa5.07□□□□□ -1.6
SNRNP40-204ENST00000474025 CPNE7Q9UBL6 633 aa5.07□□□□□ -1.6
SNRNP40-204ENST00000474025 CNOT8Q9UFF9 292 aaKnown RBP5.07□□□□□ -1.6
SNRNP40-204ENST00000474025 ZNHIT2Q9UHR6 403 aa5.07□□□□□ -1.6
SNRNP40-204ENST00000474025 LNPEPQ9UIQ6 1025 aa5.07□□□□□ -1.6
SNRNP40-204ENST00000474025 CNOT6Q9ULM6 557 aaKnown RBP5.07□□□□□ -1.6
SNRNP40-204ENST00000474025 KCNK6Q9Y257 313 aa5.07□□□□□ -1.6
SNRNP40-204ENST00000474025 PPIL1Q9Y3C6 166 aa5.07□□□□□ -1.6
SNRNP40-204ENST00000474025 PCDHGA9Q9Y5G4 932 aaKnown RBP5.07□□□□□ -1.6
SNRNP40-204ENST00000474025 TNRC6AQ8NDV7 1962 aaKnown RBP5.07□□□□□ -1.6
SNRNP40-204ENST00000474025 A0A0J9YYE9 177 aa5.06□□□□□ -1.6
SNRNP40-204ENST00000474025 OR5K4A6NMS3 321 aa5.06□□□□□ -1.6
SNRNP40-204ENST00000474025 TCP11X1B4DZS4 312 aa5.06□□□□□ -1.6
SNRNP40-204ENST00000474025 C21orf140B9A014 251 aa5.06□□□□□ -1.6
SNRNP40-204ENST00000474025 TOX3O15405 576 aaPredicted RBP5.06□□□□□ -1.6
SNRNP40-204ENST00000474025 DAPK3O43293 454 aa5.06□□□□□ -1.6
SNRNP40-204ENST00000474025 FZD6O60353 706 aa5.06□□□□□ -1.6
SNRNP40-204ENST00000474025 MAFKO60675 156 aa5.06□□□□□ -1.6
SNRNP40-204ENST00000474025 SNX2O60749 519 aa5.06□□□□□ -1.6
SNRNP40-204ENST00000474025 SPAG6O75602 509 aa5.06□□□□□ -1.6
SNRNP40-204ENST00000474025 UBXN7O94888 489 aa5.06□□□□□ -1.6
SNRNP40-204ENST00000474025 TIAF1O95411 115 aa5.06□□□□□ -1.6
SNRNP40-204ENST00000474025 ASMTLO95671 621 aa5.06□□□□□ -1.6
SNRNP40-204ENST00000474025 LDLRP01130 860 aa5.06□□□□□ -1.6
SNRNP40-204ENST00000474025 TRBC1P01850 177 aa5.06□□□□□ -1.6
SNRNP40-204ENST00000474025 PYGLP06737 847 aa5.06□□□□□ -1.6
SNRNP40-204ENST00000474025 PDHA1P08559 390 aa5.06□□□□□ -1.6
SNRNP40-204ENST00000474025 FGF5P12034 268 aa5.06□□□□□ -1.6
SNRNP40-204ENST00000474025 ACP5P13686 325 aa5.06□□□□□ -1.6
SNRNP40-204ENST00000474025 SLC2A4P14672 509 aa5.06□□□□□ -1.6
SNRNP40-204ENST00000474025 ZNF30P17039 623 aa5.06□□□□□ -1.6
SNRNP40-204ENST00000474025 TYRP1P17643 537 aa5.06□□□□□ -1.6
SNRNP40-204ENST00000474025 CAPZBP47756 277 aa5.06□□□□□ -1.6
SNRNP40-204ENST00000474025 LEPRP48357 1165 aaKnown RBP5.06□□□□□ -1.6
SNRNP40-204ENST00000474025 SEPHS1P49903 392 aa5.06□□□□□ -1.6
SNRNP40-204ENST00000474025 MAXP61244 160 aa5.06□□□□□ -1.6
SNRNP40-204ENST00000474025 RPS18P62269 152 aaKnown RBP5.06□□□□□ -1.6
SNRNP40-204ENST00000474025 CHAF1BQ13112 559 aa5.06□□□□□ -1.6
SNRNP40-204ENST00000474025 IL10RAQ13651 578 aa5.06□□□□□ -1.6
SNRNP40-204ENST00000474025 LAMB3Q13751 1172 aa5.06□□□□□ -1.6
SNRNP40-204ENST00000474025 INPP5JQ15735 1006 aaPredicted RBP5.06□□□□□ -1.6
SNRNP40-204ENST00000474025 UGT8Q16880 541 aa5.06□□□□□ -1.6
SNRNP40-204ENST00000474025 DPCR1Q3MIW9 517 aa5.06□□□□□ -1.6
SNRNP40-204ENST00000474025 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.06□□□□□ -1.6
SNRNP40-204ENST00000474025 TCP11X2Q5H9J9 407 aa5.06□□□□□ -1.6
SNRNP40-204ENST00000474025 PPP6R3Q5H9R7 873 aaPredicted RBP5.06□□□□□ -1.6
SNRNP40-204ENST00000474025 RALGPS1Q5JS13 557 aa5.06□□□□□ -1.6
SNRNP40-204ENST00000474025 ERMARDQ5T6L9 678 aa5.06□□□□□ -1.6
SNRNP40-204ENST00000474025 HENMT1Q5T8I9 393 aaKnown RBP5.06□□□□□ -1.6
SNRNP40-204ENST00000474025 ARMC12Q5T9G4 340 aa5.06□□□□□ -1.6
SNRNP40-204ENST00000474025 DCUN1D2Q6PH85 259 aa5.06□□□□□ -1.6
SNRNP40-204ENST00000474025 CHST15Q7LFX5 561 aaPredicted RBP5.06□□□□□ -1.6
SNRNP40-204ENST00000474025 PRSS42Q7Z5A4 293 aa5.06□□□□□ -1.6
SNRNP40-204ENST00000474025 SLC9B2Q86UD5 537 aa5.06□□□□□ -1.6
SNRNP40-204ENST00000474025 PHYKPLQ8IUZ5 450 aa5.06□□□□□ -1.6
SNRNP40-204ENST00000474025 RASGRP3Q8IV61 690 aa5.06□□□□□ -1.6
SNRNP40-204ENST00000474025 Q8NA96 180 aa5.06□□□□□ -1.6
SNRNP40-204ENST00000474025 AVL9Q8NBF6 648 aa5.06□□□□□ -1.6
SNRNP40-204ENST00000474025 EXD1Q8NHP7 514 aa5.06□□□□□ -1.6
SNRNP40-204ENST00000474025 THAP4Q8WY91 577 aa5.06□□□□□ -1.6
SNRNP40-204ENST00000474025 TCTN2Q96GX1 697 aa5.06□□□□□ -1.6
SNRNP40-204ENST00000474025 ELMO2Q96JJ3 720 aa5.06□□□□□ -1.6
SNRNP40-204ENST00000474025 CALR3Q96L12 384 aaKnown RBP5.06□□□□□ -1.6
SNRNP40-204ENST00000474025 TGM7Q96PF1 710 aa5.06□□□□□ -1.6
SNRNP40-204ENST00000474025 WDR24Q96S15 920 aa5.06□□□□□ -1.6
SNRNP40-204ENST00000474025 RUFY1Q96T51 708 aa5.06□□□□□ -1.6
SNRNP40-204ENST00000474025 SLC25A23Q9BV35 468 aa5.06□□□□□ -1.6
SNRNP40-204ENST00000474025 RIOK2Q9BVS4 552 aaKnown RBP5.06□□□□□ -1.6
SNRNP40-204ENST00000474025 RMI1Q9H9A7 625 aa5.06□□□□□ -1.6
SNRNP40-204ENST00000474025 AKIRIN1Q9H9L7 192 aaPredicted RBP5.06□□□□□ -1.6
SNRNP40-204ENST00000474025 UCK1Q9HA47 277 aa5.06□□□□□ -1.6
SNRNP40-204ENST00000474025 PRM3Q9NNZ6 103 aa5.06□□□□□ -1.6
SNRNP40-204ENST00000474025 NLRC4Q9NPP4 1024 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms