RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 RNF31Q96EP0 1072 aa5.98□□□□□ -1.45
RTF1-203ENST00000473214 RNFT2Q96EX2 444 aa5.98□□□□□ -1.45
RTF1-203ENST00000473214 MCRS1Q96EZ8 462 aa5.98□□□□□ -1.45
RTF1-203ENST00000473214 C14orf79Q96F83 325 aa5.98□□□□□ -1.45
RTF1-203ENST00000473214 PGM2Q96G03 612 aa5.98□□□□□ -1.45
RTF1-203ENST00000473214 MAP7D2Q96T17 732 aa5.98□□□□□ -1.45
RTF1-203ENST00000473214 GPR20Q99678 358 aa5.98□□□□□ -1.45
RTF1-203ENST00000473214 TRIM62Q9BVG3 475 aa5.98□□□□□ -1.45
RTF1-203ENST00000473214 ZNF416Q9BWM5 594 aa5.98□□□□□ -1.45
RTF1-203ENST00000473214 PINK1Q9BXM7 581 aa5.98□□□□□ -1.45
RTF1-203ENST00000473214 PITHD1Q9GZP4 211 aaPredicted RBP5.98□□□□□ -1.45
RTF1-203ENST00000473214 DCTPP1Q9H773 170 aa5.98□□□□□ -1.45
RTF1-203ENST00000473214 ECT2Q9H8V3 914 aa5.98□□□□□ -1.45
RTF1-203ENST00000473214 PPANQ9NQ55 473 aaKnown RBP5.98□□□□□ -1.45
RTF1-203ENST00000473214 WASF3Q9UPY6 502 aa5.98□□□□□ -1.45
RTF1-203ENST00000473214 PRELID1Q9Y255 219 aa5.98□□□□□ -1.45
RTF1-203ENST00000473214 PLEKHA6Q9Y2H5 1048 aa5.98□□□□□ -1.45
RTF1-203ENST00000473214 MRPS7Q9Y2R9 242 aaKnown RBP5.98□□□□□ -1.45
RTF1-203ENST00000473214 QSER1Q2KHR3 1735 aa5.98□□□□□ -1.45
RTF1-203ENST00000473214 TNS2Q63HR2 1409 aa5.98□□□□□ -1.45
RTF1-203ENST00000473214 CPDO75976 1380 aa5.97□□□□□ -1.45
RTF1-203ENST00000473214 A0A0A6YYJ9 748 aa5.97□□□□□ -1.45
RTF1-203ENST00000473214 LOC100506127A0A0U1RQW1 187 aa5.97□□□□□ -1.45
RTF1-203ENST00000473214 OR6C65A6NJZ3 312 aa5.97□□□□□ -1.45
RTF1-203ENST00000473214 ETV2O00321 342 aaPredicted RBP5.97□□□□□ -1.45
RTF1-203ENST00000473214 MEIS2O14770 477 aa5.97□□□□□ -1.45
RTF1-203ENST00000473214 SLC30A4O14863 429 aa5.97□□□□□ -1.45
RTF1-203ENST00000473214 SLC16A3O15427 465 aaKnown RBP5.97□□□□□ -1.45
RTF1-203ENST00000473214 ST8SIA3O43173 380 aa5.97□□□□□ -1.45
RTF1-203ENST00000473214 DHHO43323 396 aa5.97□□□□□ -1.45
RTF1-203ENST00000473214 SSX5O60225 188 aa5.97□□□□□ -1.45
RTF1-203ENST00000473214 HS6ST1O60243 411 aa5.97□□□□□ -1.45
RTF1-203ENST00000473214 PAGE4O60829 102 aa5.97□□□□□ -1.45
RTF1-203ENST00000473214 HSF2BPO75031 334 aa5.97□□□□□ -1.45
RTF1-203ENST00000473214 DNAJB6O75190 326 aa5.97□□□□□ -1.45
RTF1-203ENST00000473214 USP12O75317 370 aa5.97□□□□□ -1.45
RTF1-203ENST00000473214 RHOBTB1O94844 696 aa5.97□□□□□ -1.45
RTF1-203ENST00000473214 SEC24DO94855 1032 aaPredicted RBP5.97□□□□□ -1.45
RTF1-203ENST00000473214 SERPINA3P01011 423 aa5.97□□□□□ -1.45
RTF1-203ENST00000473214 FUCA1P04066 466 aa5.97□□□□□ -1.45
RTF1-203ENST00000473214 RLN1P04808 185 aa5.97□□□□□ -1.45
RTF1-203ENST00000473214 UQCRFS1P1P0C7P4 283 aa5.97□□□□□ -1.45
RTF1-203ENST00000473214 CLUP10909 449 aa5.97□□□□□ -1.45
RTF1-203ENST00000473214 ACP5P13686 325 aa5.97□□□□□ -1.45
RTF1-203ENST00000473214 CHN1P15882 459 aa5.97□□□□□ -1.45
RTF1-203ENST00000473214 ZNF8P17098 575 aaPredicted RBP5.97□□□□□ -1.45
RTF1-203ENST00000473214 CKMT2P17540 419 aa5.97□□□□□ -1.45
RTF1-203ENST00000473214 ADRA2CP18825 462 aa5.97□□□□□ -1.45
RTF1-203ENST00000473214 ADRA1DP25100 572 aa5.97□□□□□ -1.45
RTF1-203ENST00000473214 PTGS2P35354 604 aa5.97□□□□□ -1.45
RTF1-203ENST00000473214 SLC16A2P36021 539 aa5.97□□□□□ -1.45
RTF1-203ENST00000473214 FRKP42685 505 aaPredicted RBP5.97□□□□□ -1.45
RTF1-203ENST00000473214 CTXN1P60606 82 aa5.97□□□□□ -1.45
RTF1-203ENST00000473214 NKX3-2P78367 333 aa5.97□□□□□ -1.45
RTF1-203ENST00000473214 EFNB1P98172 346 aa5.97□□□□□ -1.45
RTF1-203ENST00000473214 ATP2C1P98194 919 aaPredicted RBP5.97□□□□□ -1.45
RTF1-203ENST00000473214 GALK2Q01415 458 aa5.97□□□□□ -1.45
RTF1-203ENST00000473214 CSTF3Q12996 717 aaKnown RBP5.97□□□□□ -1.45
RTF1-203ENST00000473214 LARS2Q15031 903 aaKnown RBP5.97□□□□□ -1.45
RTF1-203ENST00000473214 P3H1Q32P28 736 aa5.97□□□□□ -1.45
RTF1-203ENST00000473214 Q3ZCU0 254 aa5.97□□□□□ -1.45
RTF1-203ENST00000473214 LIN9Q5TKA1 542 aa5.97□□□□□ -1.45
RTF1-203ENST00000473214 MANEALQ5VSG8 457 aa5.97□□□□□ -1.45
RTF1-203ENST00000473214 NANOGNBQ7Z5D8 188 aa5.97□□□□□ -1.45
RTF1-203ENST00000473214 AACSQ86V21 672 aa5.97□□□□□ -1.45
RTF1-203ENST00000473214 MFN1Q8IWA4 741 aa5.97□□□□□ -1.45
RTF1-203ENST00000473214 RNF10Q8N5U6 811 aaKnown RBP5.97□□□□□ -1.45
RTF1-203ENST00000473214 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.97□□□□□ -1.45
RTF1-203ENST00000473214 PTGR2Q8N8N7 351 aaPredicted RBP5.97□□□□□ -1.45
RTF1-203ENST00000473214 PIK3C3Q8NEB9 887 aa5.97□□□□□ -1.45
RTF1-203ENST00000473214 NSMCE1Q8WV22 266 aa5.97□□□□□ -1.45
RTF1-203ENST00000473214 SNX33Q8WV41 574 aa5.97□□□□□ -1.45
RTF1-203ENST00000473214 DPF1Q92782 380 aa5.97□□□□□ -1.45
RTF1-203ENST00000473214 DNASE1L2Q92874 299 aa5.97□□□□□ -1.45
RTF1-203ENST00000473214 UBE2FQ969M7 185 aa5.97□□□□□ -1.45
RTF1-203ENST00000473214 SGK3Q96BR1 496 aa5.97□□□□□ -1.45
RTF1-203ENST00000473214 PRR11Q96HE9 360 aaPredicted RBP5.97□□□□□ -1.45
RTF1-203ENST00000473214 GORASP1Q9BQQ3 440 aa5.97□□□□□ -1.45
RTF1-203ENST00000473214 OSBPL10Q9BXB5 764 aa5.97□□□□□ -1.45
RTF1-203ENST00000473214 MRPL37Q9BZE1 423 aaKnown RBP5.97□□□□□ -1.45
RTF1-203ENST00000473214 GOLPH3LQ9H4A5 285 aa5.97□□□□□ -1.45
RTF1-203ENST00000473214 RPF1Q9H9Y2 349 aaKnown RBP5.97□□□□□ -1.45
RTF1-203ENST00000473214 SPACA1Q9HBV2 294 aa5.97□□□□□ -1.45
RTF1-203ENST00000473214 MED4Q9NPJ6 270 aa5.97□□□□□ -1.45
RTF1-203ENST00000473214 LZTFL1Q9NQ48 299 aa5.97□□□□□ -1.45
RTF1-203ENST00000473214 LANCL2Q9NS86 450 aa5.97□□□□□ -1.45
RTF1-203ENST00000473214 FARSBQ9NSD9 589 aaKnown RBP5.97□□□□□ -1.45
RTF1-203ENST00000473214 HAO2Q9NYQ3 351 aa5.97□□□□□ -1.45
RTF1-203ENST00000473214 GDE1Q9NZC3 331 aa5.97□□□□□ -1.45
RTF1-203ENST00000473214 SPG21Q9NZD8 308 aa5.97□□□□□ -1.45
RTF1-203ENST00000473214 OR6C2Q9NZP2 312 aa5.97□□□□□ -1.45
RTF1-203ENST00000473214 EMC3Q9P0I2 261 aa5.97□□□□□ -1.45
RTF1-203ENST00000473214 SLAMF8Q9P0V8 285 aa5.97□□□□□ -1.45
RTF1-203ENST00000473214 XPR1Q9UBH6 696 aa5.97□□□□□ -1.45
RTF1-203ENST00000473214 HEY2Q9UBP5 337 aa5.97□□□□□ -1.45
RTF1-203ENST00000473214 VPS51Q9UID3 782 aa5.97□□□□□ -1.45
RTF1-203ENST00000473214 ACSL6Q9UKU0 697 aa5.97□□□□□ -1.45
RTF1-203ENST00000473214 TCFL5Q9UL49 500 aa5.97□□□□□ -1.45
RTF1-203ENST00000473214 CDC14AQ9UNH5 594 aa5.97□□□□□ -1.45
RTF1-203ENST00000473214 RGPD5Q99666 1765 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms