RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 ATXN10Q9UBB4 475 aa19.77■□□□□ 0.76
SF1-213ENST00000472725 SLC2A6Q9UGQ3 507 aa19.77■□□□□ 0.76
SF1-213ENST00000472725 PNMA8BQ9ULN7 279 aaPredicted RBP19.77■□□□□ 0.76
SF1-213ENST00000472725 SUFUQ9UMX1 484 aa19.77■□□□□ 0.76
SF1-213ENST00000472725 GPR34Q9UPC5 381 aa19.77■□□□□ 0.76
SF1-213ENST00000472725 MAD1L1Q9Y6D9 718 aa19.77■□□□□ 0.76
SF1-213ENST00000472725 OAS3Q9Y6K5 1087 aaKnown RBP19.77■□□□□ 0.76
SF1-213ENST00000472725 PTPRZ1P23471 2315 aaPredicted RBP19.77■□□□□ 0.76
SF1-213ENST00000472725 IGLV3-16A0A075B6K0 115 aa19.76■□□□□ 0.75
SF1-213ENST00000472725 KLHL33A6NCF5 533 aa19.76■□□□□ 0.75
SF1-213ENST00000472725 TPP1O14773 563 aa19.76■□□□□ 0.75
SF1-213ENST00000472725 AQP9O43315 295 aa19.76■□□□□ 0.75
SF1-213ENST00000472725 CDK14O94921 469 aa19.76■□□□□ 0.75
SF1-213ENST00000472725 GOT2P00505 430 aaKnown RBP19.76■□□□□ 0.75
SF1-213ENST00000472725 PGAM1P18669 254 aa19.76■□□□□ 0.75
SF1-213ENST00000472725 ACRV1P26436 265 aa19.76■□□□□ 0.75
SF1-213ENST00000472725 DHX9Q08211 1270 aaKnown RBP19.76■□□□□ 0.75
SF1-213ENST00000472725 ANKRD20A4Q4UJ75 823 aa19.76■□□□□ 0.75
SF1-213ENST00000472725 PYCR3Q53H96 274 aa19.76■□□□□ 0.75
SF1-213ENST00000472725 CENPUQ71F23 418 aa19.76■□□□□ 0.75
SF1-213ENST00000472725 TRIM74Q86UV6 250 aa19.76■□□□□ 0.75
SF1-213ENST00000472725 GALNT13Q8IUC8 556 aa19.76■□□□□ 0.75
SF1-213ENST00000472725 LMNTD2Q8IXW0 634 aa19.76■□□□□ 0.75
SF1-213ENST00000472725 ZNF548Q8NEK5 533 aaPredicted RBP19.76■□□□□ 0.75
SF1-213ENST00000472725 MFSD3Q96ES6 412 aa19.76■□□□□ 0.75
SF1-213ENST00000472725 COPS8Q99627 209 aa19.76■□□□□ 0.75
SF1-213ENST00000472725 DUSP23Q9BVJ7 150 aa19.76■□□□□ 0.75
SF1-213ENST00000472725 SUDS3Q9H7L9 328 aaPredicted RBP19.76■□□□□ 0.75
SF1-213ENST00000472725 CARS2Q9HA77 564 aaKnown RBP19.76■□□□□ 0.75
SF1-213ENST00000472725 ZDHHC3Q9NYG2 299 aa19.76■□□□□ 0.75
SF1-213ENST00000472725 MOSPD1Q9UJG1 213 aa19.76■□□□□ 0.75
SF1-213ENST00000472725 TMEM98Q9Y2Y6 226 aa19.76■□□□□ 0.75
SF1-213ENST00000472725 DNMT3AQ9Y6K1 912 aaPredicted RBP19.76■□□□□ 0.75
SF1-213ENST00000472725 RPS6KL1Q9Y6S9 549 aa19.76■□□□□ 0.75
SF1-213ENST00000472725 GVINP1Q7Z2Y8 2422 aa19.76■□□□□ 0.75
SF1-213ENST00000472725 CCDC78A2IDD5 438 aa19.75■□□□□ 0.75
SF1-213ENST00000472725 LMO7DNF2Z398 122 aa19.75■□□□□ 0.75
SF1-213ENST00000472725 CCL22O00626 93 aa19.75■□□□□ 0.75
SF1-213ENST00000472725 SLC30A4O14863 429 aa19.75■□□□□ 0.75
SF1-213ENST00000472725 SCAMP1O15126 338 aa19.75■□□□□ 0.75
SF1-213ENST00000472725 KCNJ13O60928 360 aa19.75■□□□□ 0.75
SF1-213ENST00000472725 ALPPL2P10696 532 aa19.75■□□□□ 0.75
SF1-213ENST00000472725 CD59P13987 128 aa19.75■□□□□ 0.75
SF1-213ENST00000472725 MSH3P20585 1137 aa19.75■□□□□ 0.75
SF1-213ENST00000472725 HOXD11P31277 338 aaPredicted RBP19.75■□□□□ 0.75
SF1-213ENST00000472725 GRK6P43250 576 aa19.75■□□□□ 0.75
SF1-213ENST00000472725 SLC7A5Q01650 507 aa19.75■□□□□ 0.75
SF1-213ENST00000472725 GUCY2DQ02846 1103 aa19.75■□□□□ 0.75
SF1-213ENST00000472725 BNIP3Q12983 259 aa19.75■□□□□ 0.75
SF1-213ENST00000472725 BBS9Q3SYG4 887 aa19.75■□□□□ 0.75
SF1-213ENST00000472725 FASTKD1Q53R41 847 aaKnown RBP19.75■□□□□ 0.75
SF1-213ENST00000472725 ZNF542PQ5EBM4 170 aa19.75■□□□□ 0.75
SF1-213ENST00000472725 PRRT3Q5FWE3 981 aa19.75■□□□□ 0.75
SF1-213ENST00000472725 SPANXN3Q5MJ09 141 aa19.75■□□□□ 0.75
SF1-213ENST00000472725 DOK6Q6PKX4 331 aa19.75■□□□□ 0.75
SF1-213ENST00000472725 CEP128Q6ZU80 1094 aa19.75■□□□□ 0.75
SF1-213ENST00000472725 RD3Q7Z3Z2 195 aa19.75■□□□□ 0.75
SF1-213ENST00000472725 GKN2Q86XP6 184 aa19.75■□□□□ 0.75
SF1-213ENST00000472725 GABPB2Q8TAK5 448 aaPredicted RBP19.75■□□□□ 0.75
SF1-213ENST00000472725 DCUN1D1Q96GG9 259 aa19.75■□□□□ 0.75
SF1-213ENST00000472725 OR2M4Q96R27 311 aa19.75■□□□□ 0.75
SF1-213ENST00000472725 LRRC61Q9BV99 259 aa19.75■□□□□ 0.75
SF1-213ENST00000472725 TSPYL1Q9H0U9 437 aa19.75■□□□□ 0.75
SF1-213ENST00000472725 OR2AG1Q9H205 316 aa19.75■□□□□ 0.75
SF1-213ENST00000472725 MRPL40Q9NQ50 206 aaKnown RBP19.75■□□□□ 0.75
SF1-213ENST00000472725 CDV3Q9UKY7 258 aaKnown RBP19.75■□□□□ 0.75
SF1-213ENST00000472725 TEX264Q9Y6I9 313 aa19.75■□□□□ 0.75
SF1-213ENST00000472725 FAM169AQ9Y6X4 670 aa19.75■□□□□ 0.75
SF1-213ENST00000472725 PIEZO1Q92508 2521 aa19.74■□□□□ 0.75
SF1-213ENST00000472725 ZNF292O60281 2723 aa19.74■□□□□ 0.75
SF1-213ENST00000472725 F8W8V4 182 aa19.74■□□□□ 0.75
SF1-213ENST00000472725 QSOX1O00391 747 aa19.74■□□□□ 0.75
SF1-213ENST00000472725 PFDN6O15212 129 aa19.74■□□□□ 0.75
SF1-213ENST00000472725 KMOO15229 486 aa19.74■□□□□ 0.75
SF1-213ENST00000472725 GRID2O43424 1007 aa19.74■□□□□ 0.75
SF1-213ENST00000472725 VAPBO95292 243 aa19.74■□□□□ 0.75
SF1-213ENST00000472725 FUCA1P04066 466 aa19.74■□□□□ 0.75
SF1-213ENST00000472725 ZNF8P17098 575 aaPredicted RBP19.74■□□□□ 0.75
SF1-213ENST00000472725 AKT1P31749 480 aa19.74■□□□□ 0.75
SF1-213ENST00000472725 GNPDA1P46926 289 aa19.74■□□□□ 0.75
SF1-213ENST00000472725 POLD2P49005 469 aa19.74■□□□□ 0.75
SF1-213ENST00000472725 TTPAP49638 278 aa19.74■□□□□ 0.75
SF1-213ENST00000472725 PLTPP55058 493 aa19.74■□□□□ 0.75
SF1-213ENST00000472725 ILF3Q12906 894 aaKnown RBP eCLIP19.74■□□□□ 0.75
SF1-213ENST00000472725 UAP1L1Q3KQV9 507 aa19.74■□□□□ 0.75
SF1-213ENST00000472725 MSS51Q4VC12 460 aa19.74■□□□□ 0.75
SF1-213ENST00000472725 MRNIPQ6NTE8 343 aa19.74■□□□□ 0.75
SF1-213ENST00000472725 PACS1Q6VY07 963 aa19.74■□□□□ 0.75
SF1-213ENST00000472725 TAS2R42Q7RTR8 314 aa19.74■□□□□ 0.75
SF1-213ENST00000472725 LRRTM4Q86VH4 590 aa19.74■□□□□ 0.75
SF1-213ENST00000472725 SERPINA9Q86WD7 417 aa19.74■□□□□ 0.75
SF1-213ENST00000472725 RBFAQ8N0V3 343 aa19.74■□□□□ 0.75
SF1-213ENST00000472725 AGGF1Q8N302 714 aaeCLIP19.74■□□□□ 0.75
SF1-213ENST00000472725 SLC25A45Q8N413 288 aa19.74■□□□□ 0.75
SF1-213ENST00000472725 GPR150Q8NGU9 434 aa19.74■□□□□ 0.75
SF1-213ENST00000472725 GPBAR1Q8TDU6 330 aa19.74■□□□□ 0.75
SF1-213ENST00000472725 ZNF669Q96BR6 464 aaPredicted RBP19.74■□□□□ 0.75
SF1-213ENST00000472725 TCF12Q99081 682 aa19.74■□□□□ 0.75
SF1-213ENST00000472725 GSDMCQ9BYG8 508 aa19.74■□□□□ 0.75
SF1-213ENST00000472725 EPB41L5Q9HCM4 733 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms