RNA–Protein interactions for RNA: ENST00000470737.1

SEMA3F-208, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-208ENST00000470737 BTBD6Q96KE9 485 aa13.69□□□□□ -0.22
SEMA3F-208ENST00000470737 ZNF830Q96NB3 372 aaPredicted RBP13.69□□□□□ -0.22
SEMA3F-208ENST00000470737 TGM7Q96PF1 710 aa13.69□□□□□ -0.22
SEMA3F-208ENST00000470737 TSGA13Q96PP4 275 aa13.69□□□□□ -0.22
SEMA3F-208ENST00000470737 NUP85Q9BW27 656 aa13.69□□□□□ -0.22
SEMA3F-208ENST00000470737 ADGRE3Q9BY15 652 aa13.69□□□□□ -0.22
SEMA3F-208ENST00000470737 OR2AG1Q9H205 316 aa13.69□□□□□ -0.22
SEMA3F-208ENST00000470737 UCK1Q9HA47 277 aa13.69□□□□□ -0.22
SEMA3F-208ENST00000470737 SIDT1Q9NXL6 827 aaKnown RBP13.69□□□□□ -0.22
SEMA3F-208ENST00000470737 ATXN10Q9UBB4 475 aa13.69□□□□□ -0.22
SEMA3F-208ENST00000470737 KCND3Q9UK17 655 aa13.69□□□□□ -0.22
SEMA3F-208ENST00000470737 POLHQ9Y253 713 aa13.69□□□□□ -0.22
SEMA3F-208ENST00000470737 MRPS18BQ9Y676 258 aaKnown RBP13.69□□□□□ -0.22
SEMA3F-208ENST00000470737 BZW2Q9Y6E2 419 aaKnown RBP13.69□□□□□ -0.22
SEMA3F-208ENST00000470737 PDZK1P1A8MUH7 402 aa13.68□□□□□ -0.22
SEMA3F-208ENST00000470737 ANKRD66B4E2M5 251 aa13.68□□□□□ -0.22
SEMA3F-208ENST00000470737 TOX3O15405 576 aaPredicted RBP13.68□□□□□ -0.22
SEMA3F-208ENST00000470737 CBFA2T2O43439 604 aa13.68□□□□□ -0.22
SEMA3F-208ENST00000470737 KATNA1O75449 491 aa13.68□□□□□ -0.22
SEMA3F-208ENST00000470737 SLC25A14O95258 325 aaPredicted RBP13.68□□□□□ -0.22
SEMA3F-208ENST00000470737 NDUFA10O95299 355 aa13.68□□□□□ -0.22
SEMA3F-208ENST00000470737 PRLP01236 227 aa13.68□□□□□ -0.22
SEMA3F-208ENST00000470737 C9P02748 559 aa13.68□□□□□ -0.22
SEMA3F-208ENST00000470737 HLA-DQB2P05538 268 aa13.68□□□□□ -0.22
SEMA3F-208ENST00000470737 CD48P09326 243 aa13.68□□□□□ -0.22
SEMA3F-208ENST00000470737 CCNYL3P0C7X3 344 aa13.68□□□□□ -0.22
SEMA3F-208ENST00000470737 ZNF8P17098 575 aaPredicted RBP13.68□□□□□ -0.22
SEMA3F-208ENST00000470737 TYRP1P17643 537 aa13.68□□□□□ -0.22
SEMA3F-208ENST00000470737 XRCC1P18887 633 aaPredicted RBP13.68□□□□□ -0.22
SEMA3F-208ENST00000470737 IL4RP24394 825 aa13.68□□□□□ -0.22
SEMA3F-208ENST00000470737 SEPHS1P49903 392 aa13.68□□□□□ -0.22
SEMA3F-208ENST00000470737 GFERP55789 205 aa13.68□□□□□ -0.22
SEMA3F-208ENST00000470737 UBE2IP63279 158 aaKnown RBP13.68□□□□□ -0.22
SEMA3F-208ENST00000470737 DPYSL3Q14195 570 aa13.68□□□□□ -0.22
SEMA3F-208ENST00000470737 ERV3-1Q14264 604 aa13.68□□□□□ -0.22
SEMA3F-208ENST00000470737 QPCTQ16769 361 aa13.68□□□□□ -0.22
SEMA3F-208ENST00000470737 ZFYVE27Q5T4F4 411 aa13.68□□□□□ -0.22
SEMA3F-208ENST00000470737 TMEM26Q6ZUK4 368 aa13.68□□□□□ -0.22
SEMA3F-208ENST00000470737 CCDC13Q8IYE1 715 aa13.68□□□□□ -0.22
SEMA3F-208ENST00000470737 GALNT6Q8NCL4 622 aa13.68□□□□□ -0.22
SEMA3F-208ENST00000470737 CCNYQ8ND76 341 aa13.68□□□□□ -0.22
SEMA3F-208ENST00000470737 ARRDC2Q8TBH0 407 aa13.68□□□□□ -0.22
SEMA3F-208ENST00000470737 PLEKHG4BQ96PX9 1271 aa13.68□□□□□ -0.22
SEMA3F-208ENST00000470737 OR6C1Q96RD1 312 aa13.68□□□□□ -0.22
SEMA3F-208ENST00000470737 WDR24Q96S15 920 aa13.68□□□□□ -0.22
SEMA3F-208ENST00000470737 ZNF670Q9BS34 389 aa13.68□□□□□ -0.22
SEMA3F-208ENST00000470737 ZSCAN5AQ9BUG6 496 aa13.68□□□□□ -0.22
SEMA3F-208ENST00000470737 THAP2Q9H0W7 228 aa13.68□□□□□ -0.22
SEMA3F-208ENST00000470737 ZFYVE1Q9HBF4 777 aa13.68□□□□□ -0.22
SEMA3F-208ENST00000470737 ARFGAP3Q9NP61 516 aa13.68□□□□□ -0.22
SEMA3F-208ENST00000470737 RAD18Q9NS91 495 aa13.68□□□□□ -0.22
SEMA3F-208ENST00000470737 IFNKQ9P0W0 207 aa13.68□□□□□ -0.22
SEMA3F-208ENST00000470737 LNPEPQ9UIQ6 1025 aa13.68□□□□□ -0.22
SEMA3F-208ENST00000470737 CROTQ9UKG9 612 aa13.68□□□□□ -0.22
SEMA3F-208ENST00000470737 CAPN11Q9UMQ6 739 aa13.68□□□□□ -0.22
SEMA3F-208ENST00000470737 PLAAQ9Y263 795 aa13.68□□□□□ -0.22
SEMA3F-208ENST00000470737 MAN2B2Q9Y2E5 1009 aa13.68□□□□□ -0.22
SEMA3F-208ENST00000470737 KCNMB2Q9Y691 235 aa13.68□□□□□ -0.22
SEMA3F-208ENST00000470737 CDC14CA4D256 554 aa13.67□□□□□ -0.22
SEMA3F-208ENST00000470737 RFPL1O75677 317 aa13.67□□□□□ -0.22
SEMA3F-208ENST00000470737 KIAA0754O94854 1291 aa13.67□□□□□ -0.22
SEMA3F-208ENST00000470737 MT-ND3P03897 115 aa13.67□□□□□ -0.22
SEMA3F-208ENST00000470737 CD86P42081 329 aa13.67□□□□□ -0.22
SEMA3F-208ENST00000470737 ZBED6P86452 979 aa13.67□□□□□ -0.22
SEMA3F-208ENST00000470737 NIPAL4Q0D2K0 466 aa13.67□□□□□ -0.22
SEMA3F-208ENST00000470737 IL11RAQ14626 422 aa13.67□□□□□ -0.22
SEMA3F-208ENST00000470737 PDK2Q15119 407 aa13.67□□□□□ -0.22
SEMA3F-208ENST00000470737 PLA2G4EQ3MJ16 856 aa13.67□□□□□ -0.22
SEMA3F-208ENST00000470737 ALS2CLQ60I27 953 aa13.67□□□□□ -0.22
SEMA3F-208ENST00000470737 TCTN3Q6NUS6 607 aa13.67□□□□□ -0.22
SEMA3F-208ENST00000470737 CRTC3Q6UUV7 619 aa13.67□□□□□ -0.22
SEMA3F-208ENST00000470737 FAM71BQ8TC56 605 aa13.67□□□□□ -0.22
SEMA3F-208ENST00000470737 RNF31Q96EP0 1072 aa13.67□□□□□ -0.22
SEMA3F-208ENST00000470737 ZNF768Q9H5H4 540 aaKnown RBP13.67□□□□□ -0.22
SEMA3F-208ENST00000470737 TRIM39Q9HCM9 518 aa13.67□□□□□ -0.22
SEMA3F-208ENST00000470737 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.67□□□□□ -0.22
SEMA3F-208ENST00000470737 KMOO15229 486 aa13.66□□□□□ -0.22
SEMA3F-208ENST00000470737 MTSS1O43312 755 aa13.66□□□□□ -0.22
SEMA3F-208ENST00000470737 SLC4A1P02730 911 aa13.66□□□□□ -0.22
SEMA3F-208ENST00000470737 CYP1A2P05177 515 aa13.66□□□□□ -0.22
SEMA3F-208ENST00000470737 ZNF28P17035 718 aa13.66□□□□□ -0.22
SEMA3F-208ENST00000470737 VCLP18206 1134 aa13.66□□□□□ -0.22
SEMA3F-208ENST00000470737 NR1D1P20393 614 aa13.66□□□□□ -0.22
SEMA3F-208ENST00000470737 F8A1P23610 371 aa13.66□□□□□ -0.22
SEMA3F-208ENST00000470737 CASP14P31944 242 aa13.66□□□□□ -0.22
SEMA3F-208ENST00000470737 TRIM14Q14142 442 aa13.66□□□□□ -0.22
SEMA3F-208ENST00000470737 GALNT3Q14435 633 aa13.66□□□□□ -0.22
SEMA3F-208ENST00000470737 IHHQ14623 411 aa13.66□□□□□ -0.22
SEMA3F-208ENST00000470737 SEPT7Q16181 437 aaKnown RBP13.66□□□□□ -0.22
SEMA3F-208ENST00000470737 ZNF648Q5T619 568 aaPredicted RBP13.66□□□□□ -0.22
SEMA3F-208ENST00000470737 CACHD1Q5VU97 1274 aa13.66□□□□□ -0.22
SEMA3F-208ENST00000470737 PDPK2PQ6A1A2 396 aa13.66□□□□□ -0.22
SEMA3F-208ENST00000470737 SARM1Q6SZW1 724 aa13.66□□□□□ -0.22
SEMA3F-208ENST00000470737 ASB18Q6ZVZ8 466 aa13.66□□□□□ -0.22
SEMA3F-208ENST00000470737 LRRTM4Q86VH4 590 aa13.66□□□□□ -0.22
SEMA3F-208ENST00000470737 RBM12BQ8IXT5 1001 aaKnown RBP13.66□□□□□ -0.22
SEMA3F-208ENST00000470737 TRAM1L1Q8N609 369 aa13.66□□□□□ -0.22
SEMA3F-208ENST00000470737 GLYATL1Q969I3 302 aa13.66□□□□□ -0.22
SEMA3F-208ENST00000470737 MIB2Q96AX9 1013 aa13.66□□□□□ -0.22
SEMA3F-208ENST00000470737 HDAC11Q96DB2 347 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms