RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 DEFB133Q30KQ1 61 aa17.54■□□□□ 0.4
MRPL28-208ENST00000469744 RGS9BPQ6ZS82 235 aa17.54■□□□□ 0.4
MRPL28-208ENST00000469744 CAPN12Q6ZSI9 719 aa17.54■□□□□ 0.4
MRPL28-208ENST00000469744 CCNJLQ8IV13 435 aa17.54■□□□□ 0.4
MRPL28-208ENST00000469744 PHACTR4Q8IZ21 702 aa17.54■□□□□ 0.4
MRPL28-208ENST00000469744 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.54■□□□□ 0.4
MRPL28-208ENST00000469744 CCDC197Q8NCU1 140 aa17.54■□□□□ 0.4
MRPL28-208ENST00000469744 MZB1Q8WU39 189 aa17.54■□□□□ 0.4
MRPL28-208ENST00000469744 APOLD1Q96LR9 279 aa17.54■□□□□ 0.4
MRPL28-208ENST00000469744 NUDCD1Q96RS6 583 aa17.54■□□□□ 0.4
MRPL28-208ENST00000469744 MGME1Q9BQP7 344 aa17.54■□□□□ 0.4
MRPL28-208ENST00000469744 NT5MQ9NPB1 228 aa17.54■□□□□ 0.4
MRPL28-208ENST00000469744 APOBEC3BQ9UH17 382 aaKnown RBP17.54■□□□□ 0.4
MRPL28-208ENST00000469744 OR1A2Q9Y585 309 aa17.54■□□□□ 0.4
MRPL28-208ENST00000469744 LRP4O75096 1905 aa17.54■□□□□ 0.4
MRPL28-208ENST00000469744 LY6G6EA0A0G2JKS1 128 aa17.53■□□□□ 0.4
MRPL28-208ENST00000469744 TRABD2BA6NFA1 517 aa17.53■□□□□ 0.4
MRPL28-208ENST00000469744 NEMP2A6NFY4 417 aa17.53■□□□□ 0.4
MRPL28-208ENST00000469744 AQP9O43315 295 aa17.53■□□□□ 0.4
MRPL28-208ENST00000469744 TYROBPO43914 113 aa17.53■□□□□ 0.4
MRPL28-208ENST00000469744 ZWINTO95229 277 aa17.53■□□□□ 0.4
MRPL28-208ENST00000469744 ASMTLO95671 621 aa17.53■□□□□ 0.4
MRPL28-208ENST00000469744 VIMP08670 466 aaKnown RBP17.53■□□□□ 0.4
MRPL28-208ENST00000469744 C1SP09871 688 aa17.53■□□□□ 0.4
MRPL28-208ENST00000469744 ELFN1P0C7U0 828 aa17.53■□□□□ 0.4
MRPL28-208ENST00000469744 ALPPL2P10696 532 aa17.53■□□□□ 0.4
MRPL28-208ENST00000469744 JUPP14923 745 aa17.53■□□□□ 0.4
MRPL28-208ENST00000469744 ACP1P24666 158 aa17.53■□□□□ 0.4
MRPL28-208ENST00000469744 TRAF2Q12933 501 aa17.53■□□□□ 0.4
MRPL28-208ENST00000469744 CAMK2BQ13554 666 aa17.53■□□□□ 0.4
MRPL28-208ENST00000469744 PTK2BQ14289 1009 aa17.53■□□□□ 0.4
MRPL28-208ENST00000469744 SPARCL1Q14515 664 aa17.53■□□□□ 0.4
MRPL28-208ENST00000469744 INPP5AQ14642 412 aa17.53■□□□□ 0.4
MRPL28-208ENST00000469744 PTPRRQ15256 657 aa17.53■□□□□ 0.4
MRPL28-208ENST00000469744 PRRT3Q5FWE3 981 aa17.53■□□□□ 0.4
MRPL28-208ENST00000469744 MARC1Q5VT66 337 aa17.53■□□□□ 0.4
MRPL28-208ENST00000469744 LIPIQ6XZB0 460 aa17.53■□□□□ 0.4
MRPL28-208ENST00000469744 MACC1Q6ZN28 852 aa17.53■□□□□ 0.4
MRPL28-208ENST00000469744 ZNF534Q76KX8 674 aa17.53■□□□□ 0.4
MRPL28-208ENST00000469744 TMPRSS12Q86WS5 348 aa17.53■□□□□ 0.4
MRPL28-208ENST00000469744 ANKS4BQ8N8V4 417 aa17.53■□□□□ 0.4
MRPL28-208ENST00000469744 ANKRD42Q8N9B4 389 aa17.53■□□□□ 0.4
MRPL28-208ENST00000469744 PLA2G15Q8NCC3 412 aa17.53■□□□□ 0.4
MRPL28-208ENST00000469744 NSMCE1Q8WV22 266 aa17.53■□□□□ 0.4
MRPL28-208ENST00000469744 GRAMD1AQ96CP6 724 aa17.53■□□□□ 0.4
MRPL28-208ENST00000469744 SIGLEC10Q96LC7 697 aa17.53■□□□□ 0.4
MRPL28-208ENST00000469744 EBNA1BP2Q99848 306 aaKnown RBP17.53■□□□□ 0.4
MRPL28-208ENST00000469744 CCDC86Q9H6F5 360 aaKnown RBP17.53■□□□□ 0.4
MRPL28-208ENST00000469744 SAMD15Q9P1V8 674 aa17.53■□□□□ 0.4
MRPL28-208ENST00000469744 B4GALT6Q9UBX8 382 aa17.53■□□□□ 0.4
MRPL28-208ENST00000469744 ZC3H7BQ9UGR2 993 aaKnown RBP17.53■□□□□ 0.4
MRPL28-208ENST00000469744 TTLL3Q9Y4R7 772 aa17.53■□□□□ 0.4
MRPL28-208ENST00000469744 U3KQA8 63 aa17.53■□□□□ 0.4
MRPL28-208ENST00000469744 ZFYVE26Q68DK2 2539 aa17.53■□□□□ 0.4
MRPL28-208ENST00000469744 ZFHX4Q86UP3 3567 aa17.53■□□□□ 0.4
MRPL28-208ENST00000469744 ASXL3Q9C0F0 2248 aa17.52■□□□□ 0.4
MRPL28-208ENST00000469744 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.52■□□□□ 0.4
MRPL28-208ENST00000469744 RECQL5O94762 991 aaPredicted RBP17.52■□□□□ 0.4
MRPL28-208ENST00000469744 CPP00450 1065 aa17.52■□□□□ 0.4
MRPL28-208ENST00000469744 C1QAP02745 245 aa17.52■□□□□ 0.4
MRPL28-208ENST00000469744 CELA2BP08218 269 aaPredicted RBP17.52■□□□□ 0.4
MRPL28-208ENST00000469744 GARSP41250 739 aaKnown RBP17.52■□□□□ 0.4
MRPL28-208ENST00000469744 YPEL5P62699 121 aa17.52■□□□□ 0.4
MRPL28-208ENST00000469744 PPIDQ08752 370 aaKnown RBP17.52■□□□□ 0.4
MRPL28-208ENST00000469744 GALNT2Q10471 571 aa17.52■□□□□ 0.4
MRPL28-208ENST00000469744 FAXCQ5TGI0 409 aa17.52■□□□□ 0.4
MRPL28-208ENST00000469744 STEAP4Q687X5 459 aa17.52■□□□□ 0.4
MRPL28-208ENST00000469744 LRRC8BQ6P9F7 803 aa17.52■□□□□ 0.4
MRPL28-208ENST00000469744 DPPA4Q7L190 304 aa17.52■□□□□ 0.4
MRPL28-208ENST00000469744 AGGF1Q8N302 714 aaeCLIP17.52■□□□□ 0.4
MRPL28-208ENST00000469744 BBS5Q8N3I7 341 aa17.52■□□□□ 0.4
MRPL28-208ENST00000469744 TSACCQ96A04 125 aaPredicted RBP17.52■□□□□ 0.4
MRPL28-208ENST00000469744 HDAC11Q96DB2 347 aa17.52■□□□□ 0.4
MRPL28-208ENST00000469744 CABS1Q96KC9 395 aa17.52■□□□□ 0.4
MRPL28-208ENST00000469744 VAT1Q99536 393 aa17.52■□□□□ 0.4
MRPL28-208ENST00000469744 NAT9Q9BTE0 207 aa17.52■□□□□ 0.4
MRPL28-208ENST00000469744 LRRC61Q9BV99 259 aa17.52■□□□□ 0.4
MRPL28-208ENST00000469744 IKBKGQ9Y6K9 419 aa17.52■□□□□ 0.4
MRPL28-208ENST00000469744 ITPR1Q14643 2758 aa17.51■□□□□ 0.39
MRPL28-208ENST00000469744 MYO1CO00159 1063 aa17.51■□□□□ 0.39
MRPL28-208ENST00000469744 HTRA2O43464 458 aaPredicted RBP17.51■□□□□ 0.39
MRPL28-208ENST00000469744 CKMT1AP12532 417 aa17.51■□□□□ 0.39
MRPL28-208ENST00000469744 GM2AP17900 193 aa17.51■□□□□ 0.39
MRPL28-208ENST00000469744 HNF1BP35680 557 aa17.51■□□□□ 0.39
MRPL28-208ENST00000469744 POLR2LP62875 67 aaKnown RBP17.51■□□□□ 0.39
MRPL28-208ENST00000469744 INSM1Q01101 510 aaPredicted RBP17.51■□□□□ 0.39
MRPL28-208ENST00000469744 CYP4F3Q08477 520 aa17.51■□□□□ 0.39
MRPL28-208ENST00000469744 ITKQ08881 620 aa17.51■□□□□ 0.39
MRPL28-208ENST00000469744 AP1B1Q10567 949 aa17.51■□□□□ 0.39
MRPL28-208ENST00000469744 WASHC5Q12768 1159 aa17.51■□□□□ 0.39
MRPL28-208ENST00000469744 TARDBPQ13148 414 aaKnown RBP eCLIP17.51■□□□□ 0.39
MRPL28-208ENST00000469744 ILKQ13418 452 aa17.51■□□□□ 0.39
MRPL28-208ENST00000469744 FAM182AQ5T1J6 154 aa17.51■□□□□ 0.39
MRPL28-208ENST00000469744 LGSNQ5TDP6 509 aa17.51■□□□□ 0.39
MRPL28-208ENST00000469744 RD3Q7Z3Z2 195 aa17.51■□□□□ 0.39
MRPL28-208ENST00000469744 SLC26A11Q86WA9 606 aa17.51■□□□□ 0.39
MRPL28-208ENST00000469744 PROSER1Q86XN7 944 aa17.51■□□□□ 0.39
MRPL28-208ENST00000469744 HID1Q8IV36 788 aa17.51■□□□□ 0.39
MRPL28-208ENST00000469744 OTUD6BQ8N6M0 293 aa17.51■□□□□ 0.39
MRPL28-208ENST00000469744 MGARPQ8TDB4 240 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms