RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 LCN10Q6JVE6 187 aa10.06□□□□□ -0.8
HDAC3-203ENST00000467533 TRIM65Q6PJ69 517 aa10.06□□□□□ -0.8
HDAC3-203ENST00000467533 FAM180AQ6UWF9 173 aa10.06□□□□□ -0.8
HDAC3-203ENST00000467533 RPTNQ6XPR3 784 aa10.06□□□□□ -0.8
HDAC3-203ENST00000467533 RFLNAQ6ZTI6 216 aa10.06□□□□□ -0.8
HDAC3-203ENST00000467533 USP45Q70EL2 814 aa10.06□□□□□ -0.8
HDAC3-203ENST00000467533 MRGPREQ86SM8 312 aa10.06□□□□□ -0.8
HDAC3-203ENST00000467533 DSELQ8IZU8 1212 aa10.06□□□□□ -0.8
HDAC3-203ENST00000467533 UMODL1-AS1Q8N2C9 162 aa10.06□□□□□ -0.8
HDAC3-203ENST00000467533 SCAMP4Q969E2 229 aa10.06□□□□□ -0.8
HDAC3-203ENST00000467533 CLIP3Q96DZ5 547 aa10.06□□□□□ -0.8
HDAC3-203ENST00000467533 COX14Q96I36 57 aa10.06□□□□□ -0.8
HDAC3-203ENST00000467533 CELF6Q96J87 481 aaKnown RBP10.06□□□□□ -0.8
HDAC3-203ENST00000467533 SLC41A2Q96JW4 573 aa10.06□□□□□ -0.8
HDAC3-203ENST00000467533 FER1L6-AS2Q96M78 137 aa10.06□□□□□ -0.8
HDAC3-203ENST00000467533 AGAP2Q99490 1192 aa10.06□□□□□ -0.8
HDAC3-203ENST00000467533 CRACR2AQ9BSW2 395 aa10.06□□□□□ -0.8
HDAC3-203ENST00000467533 TMUB1Q9BVT8 246 aa10.06□□□□□ -0.8
HDAC3-203ENST00000467533 SP110Q9HB58 689 aa10.06□□□□□ -0.8
HDAC3-203ENST00000467533 ZBTB20Q9HC78 741 aaPredicted RBP10.06□□□□□ -0.8
HDAC3-203ENST00000467533 RCOR1Q9UKL0 485 aa10.06□□□□□ -0.8
HDAC3-203ENST00000467533 NEU2Q9Y3R4 380 aa10.06□□□□□ -0.8
HDAC3-203ENST00000467533 NUP210LQ5VU65 1888 aa10.06□□□□□ -0.8
HDAC3-203ENST00000467533 TRGV8A0A0C4DH27 118 aa10.05□□□□□ -0.8
HDAC3-203ENST00000467533 ARHGAP42A6NI28 874 aa10.05□□□□□ -0.8
HDAC3-203ENST00000467533 TMEM200CA6NKL6 621 aa10.05□□□□□ -0.8
HDAC3-203ENST00000467533 MEN1O00255 615 aa10.05□□□□□ -0.8
HDAC3-203ENST00000467533 PSMA7O14818 248 aa10.05□□□□□ -0.8
HDAC3-203ENST00000467533 SOCS5O75159 536 aa10.05□□□□□ -0.8
HDAC3-203ENST00000467533 JRKO75564 520 aa10.05□□□□□ -0.8
HDAC3-203ENST00000467533 JCHAINP01591 159 aa10.05□□□□□ -0.8
HDAC3-203ENST00000467533 PNMA6AP0CW24 399 aaPredicted RBP10.05□□□□□ -0.8
HDAC3-203ENST00000467533 CTPS1P17812 591 aa10.05□□□□□ -0.8
HDAC3-203ENST00000467533 XRCC1P18887 633 aaPredicted RBP10.05□□□□□ -0.8
HDAC3-203ENST00000467533 SLC19A1P41440 591 aa10.05□□□□□ -0.8
HDAC3-203ENST00000467533 TSFMP43897 325 aaKnown RBP10.05□□□□□ -0.8
HDAC3-203ENST00000467533 APBA1Q02410 837 aa10.05□□□□□ -0.8
HDAC3-203ENST00000467533 PNOCQ13519 176 aa10.05□□□□□ -0.8
HDAC3-203ENST00000467533 STIM1Q13586 685 aa10.05□□□□□ -0.8
HDAC3-203ENST00000467533 PTPRRQ15256 657 aa10.05□□□□□ -0.8
HDAC3-203ENST00000467533 GPR19Q15760 415 aa10.05□□□□□ -0.8
HDAC3-203ENST00000467533 SEPT7Q16181 437 aaKnown RBP10.05□□□□□ -0.8
HDAC3-203ENST00000467533 DCAF10Q5QP82 559 aa10.05□□□□□ -0.8
HDAC3-203ENST00000467533 DUS1LQ6P1R4 473 aaKnown RBP10.05□□□□□ -0.8
HDAC3-203ENST00000467533 MTFR2Q6P444 385 aa10.05□□□□□ -0.8
HDAC3-203ENST00000467533 FAM198BQ6UWH4 519 aa10.05□□□□□ -0.8
HDAC3-203ENST00000467533 CERS6Q6ZMG9 384 aa10.05□□□□□ -0.8
HDAC3-203ENST00000467533 ZNF765Q7L2R6 523 aa10.05□□□□□ -0.8
HDAC3-203ENST00000467533 TAOK1Q7L7X3 1001 aa10.05□□□□□ -0.8
HDAC3-203ENST00000467533 STRADAQ7RTN6 431 aa10.05□□□□□ -0.8
HDAC3-203ENST00000467533 TECPR1Q7Z6L1 1165 aa10.05□□□□□ -0.8
HDAC3-203ENST00000467533 CEP97Q8IW35 865 aa10.05□□□□□ -0.8
HDAC3-203ENST00000467533 TRIM59Q8IWR1 403 aa10.05□□□□□ -0.8
HDAC3-203ENST00000467533 SLC38A9Q8NBW4 561 aa10.05□□□□□ -0.8
HDAC3-203ENST00000467533 EXD1Q8NHP7 514 aa10.05□□□□□ -0.8
HDAC3-203ENST00000467533 PPP4R1Q8TF05 950 aa10.05□□□□□ -0.8
HDAC3-203ENST00000467533 FAM172AQ8WUF8 416 aa10.05□□□□□ -0.8
HDAC3-203ENST00000467533 RXFP2Q8WXD0 754 aa10.05□□□□□ -0.8
HDAC3-203ENST00000467533 CPT1BQ92523 772 aa10.05□□□□□ -0.8
HDAC3-203ENST00000467533 NTAN1Q96AB6 310 aa10.05□□□□□ -0.8
HDAC3-203ENST00000467533 C14orf79Q96F83 325 aa10.05□□□□□ -0.8
HDAC3-203ENST00000467533 CCDC34Q96HJ3 373 aa10.05□□□□□ -0.8
HDAC3-203ENST00000467533 CNDP1Q96KN2 507 aa10.05□□□□□ -0.8
HDAC3-203ENST00000467533 NSMCE3Q96MG7 304 aa10.05□□□□□ -0.8
HDAC3-203ENST00000467533 SLX1AQ9BQ83 275 aa10.05□□□□□ -0.8
HDAC3-203ENST00000467533 LRRC19Q9H756 370 aa10.05□□□□□ -0.8
HDAC3-203ENST00000467533 MCCC2Q9HCC0 563 aa10.05□□□□□ -0.8
HDAC3-203ENST00000467533 POT1Q9NUX5 634 aa10.05□□□□□ -0.8
HDAC3-203ENST00000467533 OLAHQ9NV23 265 aa10.05□□□□□ -0.8
HDAC3-203ENST00000467533 SCHIP1Q9P0W5 487 aaPredicted RBP10.05□□□□□ -0.8
HDAC3-203ENST00000467533 APEX2Q9UBZ4 518 aa10.05□□□□□ -0.8
HDAC3-203ENST00000467533 EPHA6Q9UF33 1036 aa10.05□□□□□ -0.8
HDAC3-203ENST00000467533 PADI2Q9Y2J8 665 aa10.05□□□□□ -0.8
HDAC3-203ENST00000467533 PCDHGC4Q9Y5F7 938 aa10.05□□□□□ -0.8
HDAC3-203ENST00000467533 PCM1Q15154 2024 aa10.04□□□□□ -0.8
HDAC3-203ENST00000467533 A0A0U1RQS6 177 aa10.04□□□□□ -0.8
HDAC3-203ENST00000467533 TTC24A2A3L6 582 aaPredicted RBP10.04□□□□□ -0.8
HDAC3-203ENST00000467533 PDZK1P1A8MUH7 402 aa10.04□□□□□ -0.8
HDAC3-203ENST00000467533 C19orf84I3L1E1 186 aa10.04□□□□□ -0.8
HDAC3-203ENST00000467533 CCL21O00585 134 aa10.04□□□□□ -0.8
HDAC3-203ENST00000467533 PEX12O00623 359 aa10.04□□□□□ -0.8
HDAC3-203ENST00000467533 FGF10O15520 208 aaPredicted RBP10.04□□□□□ -0.8
HDAC3-203ENST00000467533 GRID2O43424 1007 aa10.04□□□□□ -0.8
HDAC3-203ENST00000467533 HTRA2O43464 458 aaPredicted RBP10.04□□□□□ -0.8
HDAC3-203ENST00000467533 MTA2O94776 668 aa10.04□□□□□ -0.8
HDAC3-203ENST00000467533 IGHEP01854 428 aa10.04□□□□□ -0.8
HDAC3-203ENST00000467533 ZSCAN22P10073 491 aaPredicted RBP10.04□□□□□ -0.8
HDAC3-203ENST00000467533 CDH5P33151 784 aaPredicted RBP10.04□□□□□ -0.8
HDAC3-203ENST00000467533 PAPOLAP51003 745 aaKnown RBP10.04□□□□□ -0.8
HDAC3-203ENST00000467533 TUBB4BP68371 445 aa10.04□□□□□ -0.8
HDAC3-203ENST00000467533 OTUD4Q01804 1114 aaKnown RBP10.04□□□□□ -0.8
HDAC3-203ENST00000467533 NSUN2Q08J23 767 aaKnown RBP eCLIP10.04□□□□□ -0.8
HDAC3-203ENST00000467533 TUBB2AQ13885 445 aa10.04□□□□□ -0.8
HDAC3-203ENST00000467533 GPR18Q14330 331 aa10.04□□□□□ -0.8
HDAC3-203ENST00000467533 ZNF169Q14929 603 aaPredicted RBP10.04□□□□□ -0.8
HDAC3-203ENST00000467533 NCF4Q15080 339 aa10.04□□□□□ -0.8
HDAC3-203ENST00000467533 PLA2G4EQ3MJ16 856 aa10.04□□□□□ -0.8
HDAC3-203ENST00000467533 CCDC14Q49A88 953 aa10.04□□□□□ -0.8
HDAC3-203ENST00000467533 PLEKHS1Q5SXH7 462 aa10.04□□□□□ -0.8
HDAC3-203ENST00000467533 LRRC66Q68CR7 880 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 439 ms