RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 ANGPTL3Q9Y5C1 460 aa3.77□□□□□ -1.81
VPS50-209ENST00000467326 ATAD2BQ9ULI0 1458 aa3.76□□□□□ -1.81
VPS50-209ENST00000467326 SAA2-SAA4A0A096LPE2 208 aa3.76□□□□□ -1.81
VPS50-209ENST00000467326 SH2B2O14492 632 aaPredicted RBP3.76□□□□□ -1.81
VPS50-209ENST00000467326 TSPAN4O14817 238 aa3.76□□□□□ -1.81
VPS50-209ENST00000467326 LDLRAD4O15165 306 aa3.76□□□□□ -1.81
VPS50-209ENST00000467326 TXNL1O43396 289 aa3.76□□□□□ -1.81
VPS50-209ENST00000467326 BUB3O43684 328 aa3.76□□□□□ -1.81
VPS50-209ENST00000467326 NOL3O60936 208 aaKnown RBP3.76□□□□□ -1.81
VPS50-209ENST00000467326 KERAO60938 352 aa3.76□□□□□ -1.81
VPS50-209ENST00000467326 NDUFS7O75251 213 aa3.76□□□□□ -1.81
VPS50-209ENST00000467326 SLC22A3O75751 556 aa3.76□□□□□ -1.81
VPS50-209ENST00000467326 STAM2O75886 525 aa3.76□□□□□ -1.81
VPS50-209ENST00000467326 ZNF432O94892 652 aa3.76□□□□□ -1.81
VPS50-209ENST00000467326 KDM4BO94953 1096 aa3.76□□□□□ -1.81
VPS50-209ENST00000467326 MLYCDO95822 493 aa3.76□□□□□ -1.81
VPS50-209ENST00000467326 MT-CYBP00156 380 aaPredicted RBP3.76□□□□□ -1.81
VPS50-209ENST00000467326 CLEC3BP05452 202 aa3.76□□□□□ -1.81
VPS50-209ENST00000467326 IRF1P10914 325 aa3.76□□□□□ -1.81
VPS50-209ENST00000467326 GAP43P17677 238 aa3.76□□□□□ -1.81
VPS50-209ENST00000467326 AGAP20933 346 aa3.76□□□□□ -1.81
VPS50-209ENST00000467326 SAT1P21673 171 aa3.76□□□□□ -1.81
VPS50-209ENST00000467326 HNRNPH1P31943 449 aaKnown RBP3.76□□□□□ -1.81
VPS50-209ENST00000467326 ACSL1P33121 698 aa3.76□□□□□ -1.81
VPS50-209ENST00000467326 TCF7P36402 384 aaPredicted RBP3.76□□□□□ -1.81
VPS50-209ENST00000467326 PSMB10P40306 273 aa3.76□□□□□ -1.81
VPS50-209ENST00000467326 PSMC4P43686 418 aa3.76□□□□□ -1.81
VPS50-209ENST00000467326 ZNF41P51814 821 aaPredicted RBP3.76□□□□□ -1.81
VPS50-209ENST00000467326 RAD23AP54725 363 aa3.76□□□□□ -1.81
VPS50-209ENST00000467326 UFM1P61960 85 aa3.76□□□□□ -1.81
VPS50-209ENST00000467326 TNFAIP1Q13829 316 aa3.76□□□□□ -1.81
VPS50-209ENST00000467326 CAMK1Q14012 370 aa3.76□□□□□ -1.81
VPS50-209ENST00000467326 MORF4L2Q15014 288 aa3.76□□□□□ -1.81
VPS50-209ENST00000467326 RNPS1Q15287 305 aaKnown RBP3.76□□□□□ -1.81
VPS50-209ENST00000467326 TBCEQ15813 527 aaPredicted RBP3.76□□□□□ -1.81
VPS50-209ENST00000467326 ZNF674Q2M3X9 581 aa3.76□□□□□ -1.81
VPS50-209ENST00000467326 AMZ1Q400G9 498 aa3.76□□□□□ -1.81
VPS50-209ENST00000467326 ZNF672Q499Z4 452 aaPredicted RBP3.76□□□□□ -1.81
VPS50-209ENST00000467326 HSP90B2PQ58FF3 399 aa3.76□□□□□ -1.81
VPS50-209ENST00000467326 BMP2KLQ5H9B9 411 aa3.76□□□□□ -1.81
VPS50-209ENST00000467326 FAM76BQ5HYJ3 339 aa3.76□□□□□ -1.81
VPS50-209ENST00000467326 TXNDC8Q6A555 127 aa3.76□□□□□ -1.81
VPS50-209ENST00000467326 SHQ1Q6PI26 577 aaKnown RBP3.76□□□□□ -1.81
VPS50-209ENST00000467326 LCTLQ6UWM7 567 aa3.76□□□□□ -1.81
VPS50-209ENST00000467326 OTUD6AQ7L8S5 288 aa3.76□□□□□ -1.81
VPS50-209ENST00000467326 CCDC186Q7Z3E2 898 aa3.76□□□□□ -1.81
VPS50-209ENST00000467326 CUZD1Q86UP6 607 aa3.76□□□□□ -1.81
VPS50-209ENST00000467326 TDRPQ86YL5 185 aa3.76□□□□□ -1.81
VPS50-209ENST00000467326 DHX40Q8IX18 779 aaKnown RBP3.76□□□□□ -1.81
VPS50-209ENST00000467326 SLC35F3Q8IY50 421 aa3.76□□□□□ -1.81
VPS50-209ENST00000467326 AGBL3Q8NEM8 1001 aa3.76□□□□□ -1.81
VPS50-209ENST00000467326 BEST2Q8NFU1 509 aa3.76□□□□□ -1.81
VPS50-209ENST00000467326 GRK7Q8WTQ7 553 aa3.76□□□□□ -1.81
VPS50-209ENST00000467326 SECTM1Q8WVN6 248 aa3.76□□□□□ -1.81
VPS50-209ENST00000467326 CTNNBL1Q8WYA6 563 aaPredicted RBP3.76□□□□□ -1.81
VPS50-209ENST00000467326 KLHL29Q96CT2 875 aa3.76□□□□□ -1.81
VPS50-209ENST00000467326 RUNDC3BQ96NL0 473 aa3.76□□□□□ -1.81
VPS50-209ENST00000467326 CSF3RQ99062 836 aa3.76□□□□□ -1.81
VPS50-209ENST00000467326 FTOQ9C0B1 505 aaKnown RBP eCLIP3.76□□□□□ -1.81
VPS50-209ENST00000467326 TNMDQ9H2S6 317 aa3.76□□□□□ -1.81
VPS50-209ENST00000467326 C17orf75Q9HAS0 396 aa3.76□□□□□ -1.81
VPS50-209ENST00000467326 VEZTQ9HBM0 779 aa3.76□□□□□ -1.81
VPS50-209ENST00000467326 MAGEE1Q9HCI5 957 aa3.76□□□□□ -1.81
VPS50-209ENST00000467326 HCFC1R1Q9NWW0 138 aa3.76□□□□□ -1.81
VPS50-209ENST00000467326 PPP1R14DQ9NXH3 145 aa3.76□□□□□ -1.81
VPS50-209ENST00000467326 TAS2R10Q9NYW0 307 aa3.76□□□□□ -1.81
VPS50-209ENST00000467326 ZNF224Q9NZL3 707 aa3.76□□□□□ -1.81
VPS50-209ENST00000467326 MPP6Q9NZW5 540 aa3.76□□□□□ -1.81
VPS50-209ENST00000467326 SIX4Q9UIU6 781 aa3.76□□□□□ -1.81
VPS50-209ENST00000467326 SNX9Q9Y5X1 595 aa3.76□□□□□ -1.81
VPS50-209ENST00000467326 PSAT1Q9Y617 370 aa3.76□□□□□ -1.81
VPS50-209ENST00000467326 NOTCH4Q99466 2003 aa3.76□□□□□ -1.81
VPS50-209ENST00000467326 MAGEA13PA6NCF6 341 aa3.75□□□□□ -1.81
VPS50-209ENST00000467326 KRT87PA6NCN2 255 aa3.75□□□□□ -1.81
VPS50-209ENST00000467326 AGAP14A8MT82 685 aa3.75□□□□□ -1.81
VPS50-209ENST00000467326 CAPN9O14815 690 aa3.75□□□□□ -1.81
VPS50-209ENST00000467326 KIF5CO60282 957 aa3.75□□□□□ -1.81
VPS50-209ENST00000467326 SYNCRIPO60506 623 aaKnown RBP3.75□□□□□ -1.81
VPS50-209ENST00000467326 FMO6PO60774 539 aa3.75□□□□□ -1.81
VPS50-209ENST00000467326 TBX10O75333 385 aa3.75□□□□□ -1.81
VPS50-209ENST00000467326 DDNO94850 711 aaPredicted RBP3.75□□□□□ -1.81
VPS50-209ENST00000467326 CSPG5O95196 566 aa3.75□□□□□ -1.81
VPS50-209ENST00000467326 PMS2P2O95744 297 aa3.75□□□□□ -1.81
VPS50-209ENST00000467326 TFP02787 698 aa3.75□□□□□ -1.81
VPS50-209ENST00000467326 MMP2P08253 660 aa3.75□□□□□ -1.81
VPS50-209ENST00000467326 LINC00271P0C7V0 271 aa3.75□□□□□ -1.81
VPS50-209ENST00000467326 PCP11498 1178 aaKnown RBP3.75□□□□□ -1.81
VPS50-209ENST00000467326 COX7A2P14406 83 aa3.75□□□□□ -1.81
VPS50-209ENST00000467326 GCH1P30793 250 aa3.75□□□□□ -1.81
VPS50-209ENST00000467326 MAPK4P31152 587 aa3.75□□□□□ -1.81
VPS50-209ENST00000467326 STX2P32856 288 aa3.75□□□□□ -1.81
VPS50-209ENST00000467326 DEKP35659 375 aaKnown RBP3.75□□□□□ -1.81
VPS50-209ENST00000467326 POU3F1Q03052 451 aaPredicted RBP3.75□□□□□ -1.81
VPS50-209ENST00000467326 COX10Q12887 443 aa3.75□□□□□ -1.81
VPS50-209ENST00000467326 IFT88Q13099 833 aa3.75□□□□□ -1.81
VPS50-209ENST00000467326 OASLQ15646 514 aaKnown RBP3.75□□□□□ -1.81
VPS50-209ENST00000467326 HSP90AB3PQ58FF7 597 aa3.75□□□□□ -1.81
VPS50-209ENST00000467326 PAPPA-AS1Q5QFB9 102 aa3.75□□□□□ -1.81
VPS50-209ENST00000467326 PLEKHS1Q5SXH7 462 aa3.75□□□□□ -1.81
VPS50-209ENST00000467326 KRT80Q6KB66 452 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms