RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 PRRC2AP48634 2157 aaKnown RBP3.5□□□□□ -1.85
XRN1-206ENST00000467077 YTHDC2Q9H6S0 1430 aaKnown RBP3.5□□□□□ -1.85
XRN1-206ENST00000467077 KIAA0232Q92628 1395 aa3.5□□□□□ -1.85
XRN1-206ENST00000467077 ABCC11Q96J66 1382 aa3.5□□□□□ -1.85
XRN1-206ENST00000467077 LMO7Q8WWI1 1683 aa3.49□□□□□ -1.85
XRN1-206ENST00000467077 KAT6BQ8WYB5 2073 aa3.49□□□□□ -1.85
XRN1-206ENST00000467077 HSPB2A8KAH6 182 aa3.49□□□□□ -1.85
XRN1-206ENST00000467077 SMIM1B2RUZ4 78 aa3.49□□□□□ -1.85
XRN1-206ENST00000467077 SRSF10O75494 262 aaKnown RBP3.49□□□□□ -1.85
XRN1-206ENST00000467077 RGS11O94810 467 aa3.49□□□□□ -1.85
XRN1-206ENST00000467077 PTPN2P17706 415 aa3.49□□□□□ -1.85
XRN1-206ENST00000467077 STX2P32856 288 aa3.49□□□□□ -1.85
XRN1-206ENST00000467077 TMPOP42166 694 aaKnown RBP3.49□□□□□ -1.85
XRN1-206ENST00000467077 TERF1P54274 439 aa3.49□□□□□ -1.85
XRN1-206ENST00000467077 RUNX2Q13950 521 aa3.49□□□□□ -1.85
XRN1-206ENST00000467077 ZRSR2Q15696 482 aaKnown RBP3.49□□□□□ -1.85
XRN1-206ENST00000467077 HSPB2Q16082 182 aa3.49□□□□□ -1.85
XRN1-206ENST00000467077 ESCO2Q56NI9 601 aa3.49□□□□□ -1.85
XRN1-206ENST00000467077 PPP6R3Q5H9R7 873 aaPredicted RBP3.49□□□□□ -1.85
XRN1-206ENST00000467077 ATG16L1Q676U5 607 aa3.49□□□□□ -1.85
XRN1-206ENST00000467077 CES5AQ6NT32 575 aa3.49□□□□□ -1.85
XRN1-206ENST00000467077 ADGRG6Q86SQ4 1221 aa3.49□□□□□ -1.85
XRN1-206ENST00000467077 CERS3Q8IU89 383 aa3.49□□□□□ -1.85
XRN1-206ENST00000467077 CPOQ8IVL8 374 aa3.49□□□□□ -1.85
XRN1-206ENST00000467077 ANKRD42Q8N9B4 389 aa3.49□□□□□ -1.85
XRN1-206ENST00000467077 HERVK_113Q902F9 699 aa3.49□□□□□ -1.85
XRN1-206ENST00000467077 PRAM1Q96QH2 718 aa3.49□□□□□ -1.85
XRN1-206ENST00000467077 EYA3Q99504 573 aa3.49□□□□□ -1.85
XRN1-206ENST00000467077 RBM4BQ9BQ04 359 aaKnown RBP3.49□□□□□ -1.85
XRN1-206ENST00000467077 RIC8AQ9NPQ8 531 aa3.49□□□□□ -1.85
XRN1-206ENST00000467077 CYSLTR2Q9NS75 346 aa3.49□□□□□ -1.85
XRN1-206ENST00000467077 PRR34Q9NV39 138 aa3.49□□□□□ -1.85
XRN1-206ENST00000467077 QSER1Q2KHR3 1735 aa3.49□□□□□ -1.85
XRN1-206ENST00000467077 TUBGCP6Q96RT7 1819 aa3.49□□□□□ -1.85
XRN1-206ENST00000467077 ADAMTS9Q9P2N4 1935 aa3.48□□□□□ -1.85
XRN1-206ENST00000467077 OVOS2A0A0G2JMS6 1433 aa3.48□□□□□ -1.85
XRN1-206ENST00000467077 OVOS2A0A0J9YW53 1432 aa3.48□□□□□ -1.85
XRN1-206ENST00000467077 PIK3C2GO75747 1445 aa3.48□□□□□ -1.85
XRN1-206ENST00000467077 OVOS2Q6IE36 1432 aa3.48□□□□□ -1.85
XRN1-206ENST00000467077 SSH2Q76I76 1423 aa3.48□□□□□ -1.85
XRN1-206ENST00000467077 ANKARQ7Z5J8 1434 aa3.48□□□□□ -1.85
XRN1-206ENST00000467077 A0A0U1RQF3 1178 aa3.48□□□□□ -1.85
XRN1-206ENST00000467077 KLRF2D3W0D1 207 aa3.48□□□□□ -1.85
XRN1-206ENST00000467077 NDUFS7O75251 213 aa3.48□□□□□ -1.85
XRN1-206ENST00000467077 SLC2A4P14672 509 aa3.48□□□□□ -1.85
XRN1-206ENST00000467077 GNL1P36915 607 aaPredicted RBP3.48□□□□□ -1.85
XRN1-206ENST00000467077 PIGAP37287 484 aa3.48□□□□□ -1.85
XRN1-206ENST00000467077 GPD2P43304 727 aa3.48□□□□□ -1.85
XRN1-206ENST00000467077 CCR5P51681 352 aa3.48□□□□□ -1.85
XRN1-206ENST00000467077 UBE3AQ05086 875 aa3.48□□□□□ -1.85
XRN1-206ENST00000467077 CHRNDQ07001 517 aa3.48□□□□□ -1.85
XRN1-206ENST00000467077 ARHGEF6Q15052 776 aa3.48□□□□□ -1.85
XRN1-206ENST00000467077 SOWAHAQ2M3V2 549 aa3.48□□□□□ -1.85
XRN1-206ENST00000467077 ZNF667Q5HYK9 610 aa3.48□□□□□ -1.85
XRN1-206ENST00000467077 PAPPA-AS1Q5QFB9 102 aa3.48□□□□□ -1.85
XRN1-206ENST00000467077 TBC1D26Q86UD7 250 aa3.48□□□□□ -1.85
XRN1-206ENST00000467077 FAM160B2Q86V87 743 aa3.48□□□□□ -1.85
XRN1-206ENST00000467077 ANKRD18AQ8IVF6 992 aa3.48□□□□□ -1.85
XRN1-206ENST00000467077 APLFQ8IW19 511 aaPredicted RBP3.48□□□□□ -1.85
XRN1-206ENST00000467077 PARP16Q8N5Y8 322 aa3.48□□□□□ -1.85
XRN1-206ENST00000467077 GJC3Q8NFK1 279 aa3.48□□□□□ -1.85
XRN1-206ENST00000467077 TNIP2Q8NFZ5 429 aa3.48□□□□□ -1.85
XRN1-206ENST00000467077 RUFY2Q8WXA3 655 aa3.48□□□□□ -1.85
XRN1-206ENST00000467077 SNAPC3Q92966 411 aa3.48□□□□□ -1.85
XRN1-206ENST00000467077 UPF2Q9HAU5 1272 aaKnown RBP3.48□□□□□ -1.85
XRN1-206ENST00000467077 PEMTQ9UBM1 199 aa3.48□□□□□ -1.85
XRN1-206ENST00000467077 HSF4Q9ULV5 492 aa3.48□□□□□ -1.85
XRN1-206ENST00000467077 A3GALT2U3KPV4 340 aa3.48□□□□□ -1.85
XRN1-206ENST00000467077 BTAF1O14981 1849 aa3.48□□□□□ -1.85
XRN1-206ENST00000467077 TULP4Q9NRJ4 1543 aa3.48□□□□□ -1.85
XRN1-206ENST00000467077 PCNTO95613 3336 aa3.48□□□□□ -1.85
XRN1-206ENST00000467077 DHX57Q6P158 1386 aaKnown RBP3.48□□□□□ -1.85
XRN1-206ENST00000467077 ANKRD30BQ9BXX2 1392 aa3.48□□□□□ -1.85
XRN1-206ENST00000467077 COL24A1Q17RW2 1714 aa3.47□□□□□ -1.85
XRN1-206ENST00000467077 NHSQ6T4R5 1651 aa3.47□□□□□ -1.85
XRN1-206ENST00000467077 GOLGA6L10A0A0M3HER8 536 aa3.47□□□□□ -1.85
XRN1-206ENST00000467077 H7C423 109 aa3.47□□□□□ -1.85
XRN1-206ENST00000467077 EIF3FO00303 357 aaPredicted RBP3.47□□□□□ -1.85
XRN1-206ENST00000467077 NDUFB4O95168 129 aa3.47□□□□□ -1.85
XRN1-206ENST00000467077 PCNAP12004 261 aa3.47□□□□□ -1.85
XRN1-206ENST00000467077 GATA1P15976 413 aaPredicted RBP3.47□□□□□ -1.85
XRN1-206ENST00000467077 ITGAXP20702 1163 aa3.47□□□□□ -1.85
XRN1-206ENST00000467077 NR1H2P55055 460 aa3.47□□□□□ -1.85
XRN1-206ENST00000467077 CLDN2P57739 230 aa3.47□□□□□ -1.85
XRN1-206ENST00000467077 SLC15A2Q16348 729 aa3.47□□□□□ -1.85
XRN1-206ENST00000467077 SERTAD4-AS1Q5TG53 156 aa3.47□□□□□ -1.85
XRN1-206ENST00000467077 ZDHHC20Q5W0Z9 365 aa3.47□□□□□ -1.85
XRN1-206ENST00000467077 LRRTM4Q86VH4 590 aa3.47□□□□□ -1.85
XRN1-206ENST00000467077 TMEM219Q86XT9 240 aa3.47□□□□□ -1.85
XRN1-206ENST00000467077 ERGIC1Q969X5 290 aa3.47□□□□□ -1.85
XRN1-206ENST00000467077 ELP4Q96EB1 424 aa3.47□□□□□ -1.85
XRN1-206ENST00000467077 ZC3HAV1LQ96H79 300 aaKnown RBP3.47□□□□□ -1.85
XRN1-206ENST00000467077 SLC52A3Q9NQ40 469 aa3.47□□□□□ -1.85
XRN1-206ENST00000467077 SNTG1Q9NSN8 517 aa3.47□□□□□ -1.85
XRN1-206ENST00000467077 BABAM1Q9NWV8 329 aa3.47□□□□□ -1.85
XRN1-206ENST00000467077 IL1RAPL1Q9NZN1 696 aa3.47□□□□□ -1.85
XRN1-206ENST00000467077 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.47□□□□□ -1.85
XRN1-206ENST00000467077 EIF3AQ14152 1382 aaKnown RBP3.47□□□□□ -1.85
XRN1-206ENST00000467077 ARHGEF28Q8N1W1 1705 aaKnown RBP3.47□□□□□ -1.85
XRN1-206ENST00000467077 ATP7BP35670 1465 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms