RNA–Protein interactions for RNA: ENST00000466763.5

UBA3-209, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-209ENST00000466763 ARSDP51689 593 aa13.74□□□□□ -0.21
UBA3-209ENST00000466763 DAB2P98082 770 aa13.74□□□□□ -0.21
UBA3-209ENST00000466763 TMEM115Q12893 351 aaPredicted RBP13.74□□□□□ -0.21
UBA3-209ENST00000466763 ILF3Q12906 894 aaKnown RBP eCLIP13.74□□□□□ -0.21
UBA3-209ENST00000466763 NFATC2Q13469 925 aa13.74□□□□□ -0.21
UBA3-209ENST00000466763 TUBB2AQ13885 445 aa13.74□□□□□ -0.21
UBA3-209ENST00000466763 TRIP6Q15654 476 aaKnown RBP13.74□□□□□ -0.21
UBA3-209ENST00000466763 PLA2G4EQ3MJ16 856 aa13.74□□□□□ -0.21
UBA3-209ENST00000466763 GPRC6AQ5T6X5 926 aa13.74□□□□□ -0.21
UBA3-209ENST00000466763 CRTC3Q6UUV7 619 aa13.74□□□□□ -0.21
UBA3-209ENST00000466763 DBX2Q6ZNG2 339 aa13.74□□□□□ -0.21
UBA3-209ENST00000466763 DET1Q7L5Y6 550 aa13.74□□□□□ -0.21
UBA3-209ENST00000466763 CHST15Q7LFX5 561 aaPredicted RBP13.74□□□□□ -0.21
UBA3-209ENST00000466763 KANSL1Q7Z3B3 1105 aa13.74□□□□□ -0.21
UBA3-209ENST00000466763 SNX20Q7Z614 316 aa13.74□□□□□ -0.21
UBA3-209ENST00000466763 CAND1Q86VP6 1230 aaKnown RBP13.74□□□□□ -0.21
UBA3-209ENST00000466763 MPP5Q8N3R9 675 aa13.74□□□□□ -0.21
UBA3-209ENST00000466763 MNS1Q8NEH6 495 aa13.74□□□□□ -0.21
UBA3-209ENST00000466763 OR4C6Q8NH72 309 aa13.74□□□□□ -0.21
UBA3-209ENST00000466763 CCL4L1Q8NHW4 92 aa13.74□□□□□ -0.21
UBA3-209ENST00000466763 DTX3LQ8TDB6 740 aa13.74□□□□□ -0.21
UBA3-209ENST00000466763 ULK4Q96C45 1275 aa13.74□□□□□ -0.21
UBA3-209ENST00000466763 DCUN1D1Q96GG9 259 aa13.74□□□□□ -0.21
UBA3-209ENST00000466763 SNF8Q96H20 258 aa13.74□□□□□ -0.21
UBA3-209ENST00000466763 CNDP2Q96KP4 475 aaKnown RBP13.74□□□□□ -0.21
UBA3-209ENST00000466763 ZNF778Q96MU6 729 aa13.74□□□□□ -0.21
UBA3-209ENST00000466763 SERPINB12Q96P63 405 aa13.74□□□□□ -0.21
UBA3-209ENST00000466763 CDC6Q99741 560 aa13.74□□□□□ -0.21
UBA3-209ENST00000466763 TUBB2BQ9BVA1 445 aa13.74□□□□□ -0.21
UBA3-209ENST00000466763 GSDMCQ9BYG8 508 aa13.74□□□□□ -0.21
UBA3-209ENST00000466763 ZCCHC2Q9C0B9 1178 aaKnown RBP13.74□□□□□ -0.21
UBA3-209ENST00000466763 NLGN3Q9NZ94 848 aa13.74□□□□□ -0.21
UBA3-209ENST00000466763 SIRPGQ9P1W8 387 aa13.74□□□□□ -0.21
UBA3-209ENST00000466763 GULP1Q9UBP9 304 aa13.74□□□□□ -0.21
UBA3-209ENST00000466763 ANAPC5Q9UJX4 755 aa13.74□□□□□ -0.21
UBA3-209ENST00000466763 PLEKHM1Q9Y4G2 1056 aa13.74□□□□□ -0.21
UBA3-209ENST00000466763 MRFAP1Q9Y605 127 aa13.74□□□□□ -0.21
UBA3-209ENST00000466763 MAD1L1Q9Y6D9 718 aa13.74□□□□□ -0.21
UBA3-209ENST00000466763 CSNK1G3Q9Y6M4 447 aa13.74□□□□□ -0.21
UBA3-209ENST00000466763 LMO7DNF2Z398 122 aa13.73□□□□□ -0.21
UBA3-209ENST00000466763 NUAK1O60285 661 aa13.73□□□□□ -0.21
UBA3-209ENST00000466763 DNAJC6O75061 913 aa13.73□□□□□ -0.21
UBA3-209ENST00000466763 KCNK5O95279 499 aa13.73□□□□□ -0.21
UBA3-209ENST00000466763 GOT2P00505 430 aaKnown RBP13.73□□□□□ -0.21
UBA3-209ENST00000466763 MLNP12872 115 aa13.73□□□□□ -0.21
UBA3-209ENST00000466763 MYF5P13349 255 aa13.73□□□□□ -0.21
UBA3-209ENST00000466763 ACP5P13686 325 aa13.73□□□□□ -0.21
UBA3-209ENST00000466763 AK4P27144 223 aaPredicted RBP13.73□□□□□ -0.21
UBA3-209ENST00000466763 NMBRP28336 390 aa13.73□□□□□ -0.21
UBA3-209ENST00000466763 CDKN1CP49918 316 aaPredicted RBP13.73□□□□□ -0.21
UBA3-209ENST00000466763 ITGA8P53708 1063 aa13.73□□□□□ -0.21
UBA3-209ENST00000466763 CTBSQ01459 385 aa13.73□□□□□ -0.21
UBA3-209ENST00000466763 CACNG1Q06432 222 aa13.73□□□□□ -0.21
UBA3-209ENST00000466763 KHDC1Q4VXA5 237 aaKnown RBP13.73□□□□□ -0.21
UBA3-209ENST00000466763 PYCR3Q53H96 274 aa13.73□□□□□ -0.21
UBA3-209ENST00000466763 DNTTIP2Q5QJE6 756 aaKnown RBP13.73□□□□□ -0.21
UBA3-209ENST00000466763 SLC30A9Q6PML9 568 aa13.73□□□□□ -0.21
UBA3-209ENST00000466763 LRRTM4Q86VH4 590 aa13.73□□□□□ -0.21
UBA3-209ENST00000466763 HOOK3Q86VS8 718 aa13.73□□□□□ -0.21
UBA3-209ENST00000466763 TRAPPC5Q8IUR0 188 aa13.73□□□□□ -0.21
UBA3-209ENST00000466763 OTUD6BQ8N6M0 293 aa13.73□□□□□ -0.21
UBA3-209ENST00000466763 FAM46DQ8NEK8 389 aa13.73□□□□□ -0.21
UBA3-209ENST00000466763 GLMNQ92990 594 aa13.73□□□□□ -0.21
UBA3-209ENST00000466763 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.73□□□□□ -0.21
UBA3-209ENST00000466763 C19orf43Q9BQ61 176 aa13.73□□□□□ -0.21
UBA3-209ENST00000466763 DUSP23Q9BVJ7 150 aa13.73□□□□□ -0.21
UBA3-209ENST00000466763 DPEP2Q9H4A9 486 aa13.73□□□□□ -0.21
UBA3-209ENST00000466763 RMI1Q9H9A7 625 aa13.73□□□□□ -0.21
UBA3-209ENST00000466763 TRNAU1APQ9NX07 287 aaKnown RBP13.73□□□□□ -0.21
UBA3-209ENST00000466763 GPR34Q9UPC5 381 aa13.73□□□□□ -0.21
UBA3-209ENST00000466763 ARHGEF17Q96PE2 2063 aaPredicted RBP13.73□□□□□ -0.21
UBA3-209ENST00000466763 PLXNB3Q9ULL4 1909 aa13.72□□□□□ -0.21
UBA3-209ENST00000466763 CTAGE15A4D2H0 777 aa13.72□□□□□ -0.21
UBA3-209ENST00000466763 H7C0S8 307 aa13.72□□□□□ -0.21
UBA3-209ENST00000466763 CBFA2T3O75081 653 aa13.72□□□□□ -0.21
UBA3-209ENST00000466763 CTAGE8P0CG41 777 aa13.72□□□□□ -0.21
UBA3-209ENST00000466763 GIMD1P0DJR0 217 aa13.72□□□□□ -0.21
UBA3-209ENST00000466763 RALBP11234 206 aa13.72□□□□□ -0.21
UBA3-209ENST00000466763 CEACAM1P13688 526 aa13.72□□□□□ -0.21
UBA3-209ENST00000466763 IVDP26440 423 aa13.72□□□□□ -0.21
UBA3-209ENST00000466763 ACTR1BP42025 376 aa13.72□□□□□ -0.21
UBA3-209ENST00000466763 RPL21P46778 160 aaKnown RBP13.72□□□□□ -0.21
UBA3-209ENST00000466763 ACTR1AP61163 376 aa13.72□□□□□ -0.21
UBA3-209ENST00000466763 SIM1P81133 766 aaPredicted RBP13.72□□□□□ -0.21
UBA3-209ENST00000466763 CALCOCO2Q13137 446 aa13.72□□□□□ -0.21
UBA3-209ENST00000466763 MORF4L2Q15014 288 aa13.72□□□□□ -0.21
UBA3-209ENST00000466763 SMAD1Q15797 465 aaKnown RBP13.72□□□□□ -0.21
UBA3-209ENST00000466763 INSCQ1MX18 579 aa13.72□□□□□ -0.21
UBA3-209ENST00000466763 BBS9Q3SYG4 887 aa13.72□□□□□ -0.21
UBA3-209ENST00000466763 GPR33Q49SQ1 333 aa13.72□□□□□ -0.21
UBA3-209ENST00000466763 FASTKD1Q53R41 847 aaKnown RBP13.72□□□□□ -0.21
UBA3-209ENST00000466763 PPM1JQ5JR12 505 aa13.72□□□□□ -0.21
UBA3-209ENST00000466763 C8orf74Q6P047 294 aa13.72□□□□□ -0.21
UBA3-209ENST00000466763 TMEM220Q6QAJ8 160 aa13.72□□□□□ -0.21
UBA3-209ENST00000466763 AFTPHQ6ULP2 937 aa13.72□□□□□ -0.21
UBA3-209ENST00000466763 DGLUCYQ7Z3D6 616 aa13.72□□□□□ -0.21
UBA3-209ENST00000466763 ZNF572Q7Z3I7 529 aaPredicted RBP13.72□□□□□ -0.21
UBA3-209ENST00000466763 CTAGE6Q86UF2 777 aa13.72□□□□□ -0.21
UBA3-209ENST00000466763 SERPINA9Q86WD7 417 aa13.72□□□□□ -0.21
UBA3-209ENST00000466763 CTAGE4Q8IX94 777 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms