RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 CTRCQ99895 268 aa18.92■□□□□ 0.62
COL9A3-206ENST00000466532 TBC1D10AQ9BXI6 508 aa18.92■□□□□ 0.62
COL9A3-206ENST00000466532 SLC12A9Q9BXP2 914 aa18.92■□□□□ 0.62
COL9A3-206ENST00000466532 GPR63Q9BZJ6 419 aa18.92■□□□□ 0.62
COL9A3-206ENST00000466532 OSGEPL1Q9H4B0 414 aa18.92■□□□□ 0.62
COL9A3-206ENST00000466532 TRIM39Q9HCM9 518 aa18.92■□□□□ 0.62
COL9A3-206ENST00000466532 PRDM8Q9NQV8 689 aa18.92■□□□□ 0.62
COL9A3-206ENST00000466532 KLC4Q9NSK0 619 aa18.92■□□□□ 0.62
COL9A3-206ENST00000466532 STARD5Q9NSY2 213 aa18.92■□□□□ 0.62
COL9A3-206ENST00000466532 ABHD10Q9NUJ1 306 aa18.92■□□□□ 0.62
COL9A3-206ENST00000466532 KLHL3Q9UH77 587 aa18.92■□□□□ 0.62
COL9A3-206ENST00000466532 ADGRG1Q9Y653 693 aa18.92■□□□□ 0.62
COL9A3-206ENST00000466532 BSNQ9UPA5 3926 aa18.92■□□□□ 0.62
COL9A3-206ENST00000466532 GPR89AB7ZAQ6 455 aa18.91■□□□□ 0.62
COL9A3-206ENST00000466532 MTA2O94776 668 aa18.91■□□□□ 0.62
COL9A3-206ENST00000466532 GPR89BP0CG08 455 aa18.91■□□□□ 0.62
COL9A3-206ENST00000466532 TNNT1P13805 278 aa18.91■□□□□ 0.62
COL9A3-206ENST00000466532 ITGB6P18564 788 aa18.91■□□□□ 0.62
COL9A3-206ENST00000466532 CLCNKAP51800 687 aa18.91■□□□□ 0.62
COL9A3-206ENST00000466532 MC2RQ01718 297 aa18.91■□□□□ 0.62
COL9A3-206ENST00000466532 INSCQ1MX18 579 aa18.91■□□□□ 0.62
COL9A3-206ENST00000466532 PLA2G4EQ3MJ16 856 aa18.91■□□□□ 0.62
COL9A3-206ENST00000466532 CRTC3Q6UUV7 619 aa18.91■□□□□ 0.62
COL9A3-206ENST00000466532 ADGRG6Q86SQ4 1221 aa18.91■□□□□ 0.62
COL9A3-206ENST00000466532 SPATA22Q8NHS9 363 aa18.91■□□□□ 0.62
COL9A3-206ENST00000466532 GLYATL1Q969I3 302 aa18.91■□□□□ 0.62
COL9A3-206ENST00000466532 RTP4Q96DX8 246 aa18.91■□□□□ 0.62
COL9A3-206ENST00000466532 EPB41L1Q9H4G0 881 aa18.91■□□□□ 0.62
COL9A3-206ENST00000466532 NHEJ1Q9H9Q4 299 aaPredicted RBP18.91■□□□□ 0.62
COL9A3-206ENST00000466532 NFKBIL1Q9UBC1 381 aaPredicted RBP18.91■□□□□ 0.62
COL9A3-206ENST00000466532 MT-CYBP00156 380 aaPredicted RBP18.9■□□□□ 0.62
COL9A3-206ENST00000466532 NFKB2Q00653 900 aa18.9■□□□□ 0.62
COL9A3-206ENST00000466532 SLC14A2Q15849 920 aa18.9■□□□□ 0.62
COL9A3-206ENST00000466532 LRRC38Q5VT99 294 aa18.9■□□□□ 0.62
COL9A3-206ENST00000466532 PDPK2PQ6A1A2 396 aa18.9■□□□□ 0.62
COL9A3-206ENST00000466532 CCDC70Q6NSX1 233 aa18.9■□□□□ 0.62
COL9A3-206ENST00000466532 CEACAM20Q6UY09 585 aa18.9■□□□□ 0.62
COL9A3-206ENST00000466532 RHOT1Q8IXI2 618 aa18.9■□□□□ 0.62
COL9A3-206ENST00000466532 TADA1Q96BN2 335 aa18.9■□□□□ 0.62
COL9A3-206ENST00000466532 PLEKHG4BQ96PX9 1271 aa18.9■□□□□ 0.62
COL9A3-206ENST00000466532 GLOD4Q9HC38 313 aa18.9■□□□□ 0.62
COL9A3-206ENST00000466532 FBXO8Q9NRD0 319 aa18.9■□□□□ 0.62
COL9A3-206ENST00000466532 DDX56Q9NY93 547 aaKnown RBP18.9■□□□□ 0.62
COL9A3-206ENST00000466532 PILRAQ9UKJ1 303 aa18.9■□□□□ 0.62
COL9A3-206ENST00000466532 FLNBO75369 2602 aaKnown RBP18.9■□□□□ 0.62
COL9A3-206ENST00000466532 A0A0A6YYK5 440 aaPredicted RBP18.89■□□□□ 0.61
COL9A3-206ENST00000466532 LILRA5A6NI73 299 aa18.89■□□□□ 0.61
COL9A3-206ENST00000466532 CHUKO15111 745 aa18.89■□□□□ 0.61
COL9A3-206ENST00000466532 MFAP3LO75121 409 aa18.89■□□□□ 0.61
COL9A3-206ENST00000466532 PMPCBO75439 489 aa18.89■□□□□ 0.61
COL9A3-206ENST00000466532 NDST3O95803 873 aa18.89■□□□□ 0.61
COL9A3-206ENST00000466532 BPIP17213 487 aa18.89■□□□□ 0.61
COL9A3-206ENST00000466532 PTMSP20962 102 aa18.89■□□□□ 0.61
COL9A3-206ENST00000466532 SLC1A1P43005 524 aa18.89■□□□□ 0.61
COL9A3-206ENST00000466532 NOP2P46087 812 aaKnown RBP18.89■□□□□ 0.61
COL9A3-206ENST00000466532 UBE2IP63279 158 aaKnown RBP18.89■□□□□ 0.61
COL9A3-206ENST00000466532 CLCA4Q14CN2 919 aa18.89■□□□□ 0.61
COL9A3-206ENST00000466532 TEX44Q53QW1 395 aa18.89■□□□□ 0.61
COL9A3-206ENST00000466532 MFSD7Q6UXD7 560 aa18.89■□□□□ 0.61
COL9A3-206ENST00000466532 LRRTM4Q86VH4 590 aa18.89■□□□□ 0.61
COL9A3-206ENST00000466532 VSTM4Q8IW00 320 aa18.89■□□□□ 0.61
COL9A3-206ENST00000466532 TRIM48Q8IWZ4 208 aa18.89■□□□□ 0.61
COL9A3-206ENST00000466532 NLGN4XQ8N0W4 816 aa18.89■□□□□ 0.61
COL9A3-206ENST00000466532 NLGN4YQ8NFZ3 816 aaPredicted RBP18.89■□□□□ 0.61
COL9A3-206ENST00000466532 ANP32EQ9BTT0 268 aa18.89■□□□□ 0.61
COL9A3-206ENST00000466532 CLMPQ9H6B4 373 aa18.89■□□□□ 0.61
COL9A3-206ENST00000466532 APMAPQ9HDC9 416 aa18.89■□□□□ 0.61
COL9A3-206ENST00000466532 UBP1Q9NZI7 540 aa18.89■□□□□ 0.61
COL9A3-206ENST00000466532 SCHIP1Q9P0W5 487 aaPredicted RBP18.89■□□□□ 0.61
COL9A3-206ENST00000466532 SLC23A2Q9UGH3 650 aa18.89■□□□□ 0.61
COL9A3-206ENST00000466532 DNAJC16Q9Y2G8 782 aa18.89■□□□□ 0.61
COL9A3-206ENST00000466532 HYOU1Q9Y4L1 999 aa18.89■□□□□ 0.61
COL9A3-206ENST00000466532 SPO11Q9Y5K1 396 aa18.89■□□□□ 0.61
COL9A3-206ENST00000466532 TLN1Q9Y490 2541 aaKnown RBP18.89■□□□□ 0.61
COL9A3-206ENST00000466532 KMOO15229 486 aa18.88■□□□□ 0.61
COL9A3-206ENST00000466532 PPFIA2O75334 1257 aa18.88■□□□□ 0.61
COL9A3-206ENST00000466532 MTX2O75431 263 aa18.88■□□□□ 0.61
COL9A3-206ENST00000466532 ZNF7P17097 686 aaPredicted RBP18.88■□□□□ 0.61
COL9A3-206ENST00000466532 PTPN3P26045 913 aa18.88■□□□□ 0.61
COL9A3-206ENST00000466532 SEPT7Q16181 437 aaKnown RBP18.88■□□□□ 0.61
COL9A3-206ENST00000466532 BORAQ6PGQ7 559 aa18.88■□□□□ 0.61
COL9A3-206ENST00000466532 PLXDC1Q8IUK5 500 aa18.88■□□□□ 0.61
COL9A3-206ENST00000466532 SRPK1Q96SB4 655 aaKnown RBP18.88■□□□□ 0.61
COL9A3-206ENST00000466532 ZPBPQ9BS86 351 aa18.88■□□□□ 0.61
COL9A3-206ENST00000466532 SPRY4Q9C004 299 aa18.88■□□□□ 0.61
COL9A3-206ENST00000466532 UCK1Q9HA47 277 aa18.88■□□□□ 0.61
COL9A3-206ENST00000466532 GEMIN8Q9NWZ8 242 aaKnown RBP18.88■□□□□ 0.61
COL9A3-206ENST00000466532 MN1Q10571 1320 aaPredicted RBP18.88■□□□□ 0.61
COL9A3-206ENST00000466532 ZNF891A8MT65 544 aaPredicted RBP18.87■□□□□ 0.61
COL9A3-206ENST00000466532 PDZK1P1A8MUH7 402 aa18.87■□□□□ 0.61
COL9A3-206ENST00000466532 AURKAO14965 403 aa18.87■□□□□ 0.61
COL9A3-206ENST00000466532 CAPN5O15484 640 aaPredicted RBP18.87■□□□□ 0.61
COL9A3-206ENST00000466532 SPOPO43791 374 aa18.87■□□□□ 0.61
COL9A3-206ENST00000466532 VEGFDO43915 354 aa18.87■□□□□ 0.61
COL9A3-206ENST00000466532 WISP1O95388 367 aa18.87■□□□□ 0.61
COL9A3-206ENST00000466532 VIPP01282 170 aa18.87■□□□□ 0.61
COL9A3-206ENST00000466532 XRCC1P18887 633 aaPredicted RBP18.87■□□□□ 0.61
COL9A3-206ENST00000466532 COMTP21964 271 aa18.87■□□□□ 0.61
COL9A3-206ENST00000466532 MAP4P27816 1152 aaKnown RBP18.87■□□□□ 0.61
COL9A3-206ENST00000466532 SLC19A1P41440 591 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms