RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 HEATR9A2RTY3 570 aa11.52□□□□□ -0.57
CUX1-207ENST00000465461 CCDC162PA2VCL2 907 aa11.52□□□□□ -0.57
CUX1-207ENST00000465461 OR2AG2A6NM03 316 aa11.52□□□□□ -0.57
CUX1-207ENST00000465461 TTI1O43156 1089 aa11.52□□□□□ -0.57
CUX1-207ENST00000465461 HYAL3O43820 417 aaPredicted RBP11.52□□□□□ -0.57
CUX1-207ENST00000465461 SNX2O60749 519 aa11.52□□□□□ -0.57
CUX1-207ENST00000465461 PPFIA2O75334 1257 aa11.52□□□□□ -0.57
CUX1-207ENST00000465461 CDK14O94921 469 aa11.52□□□□□ -0.57
CUX1-207ENST00000465461 GAS8O95995 478 aa11.52□□□□□ -0.57
CUX1-207ENST00000465461 ADRB1P08588 477 aa11.52□□□□□ -0.57
CUX1-207ENST00000465461 CKMT1AP12532 417 aa11.52□□□□□ -0.57
CUX1-207ENST00000465461 TPSB2P20231 275 aa11.52□□□□□ -0.57
CUX1-207ENST00000465461 ADRA1DP25100 572 aa11.52□□□□□ -0.57
CUX1-207ENST00000465461 NMBRP28336 390 aa11.52□□□□□ -0.57
CUX1-207ENST00000465461 ACTR1BP42025 376 aa11.52□□□□□ -0.57
CUX1-207ENST00000465461 CTSCP53634 463 aa11.52□□□□□ -0.57
CUX1-207ENST00000465461 ACTR1AP61163 376 aa11.52□□□□□ -0.57
CUX1-207ENST00000465461 PDE1BQ01064 536 aa11.52□□□□□ -0.57
CUX1-207ENST00000465461 ILF3Q12906 894 aaKnown RBP eCLIP11.52□□□□□ -0.57
CUX1-207ENST00000465461 NFATC2Q13469 925 aa11.52□□□□□ -0.57
CUX1-207ENST00000465461 ITGA9Q13797 1035 aa11.52□□□□□ -0.57
CUX1-207ENST00000465461 PTK6Q13882 451 aa11.52□□□□□ -0.57
CUX1-207ENST00000465461 NR0B2Q15466 257 aa11.52□□□□□ -0.57
CUX1-207ENST00000465461 TPSAB1Q15661 275 aa11.52□□□□□ -0.57
CUX1-207ENST00000465461 PERM1Q5SV97 790 aa11.52□□□□□ -0.57
CUX1-207ENST00000465461 TSTD2Q5T7W7 516 aa11.52□□□□□ -0.57
CUX1-207ENST00000465461 PDPK2PQ6A1A2 396 aa11.52□□□□□ -0.57
CUX1-207ENST00000465461 ZCCHC8Q6NZY4 707 aaKnown RBP11.52□□□□□ -0.57
CUX1-207ENST00000465461 LRRC8BQ6P9F7 803 aa11.52□□□□□ -0.57
CUX1-207ENST00000465461 TAS2R42Q7RTR8 314 aa11.52□□□□□ -0.57
CUX1-207ENST00000465461 CAND1Q86VP6 1230 aaKnown RBP11.52□□□□□ -0.57
CUX1-207ENST00000465461 ZNF547Q8IVP9 402 aa11.52□□□□□ -0.57
CUX1-207ENST00000465461 BEND7Q8N7W2 519 aaPredicted RBP11.52□□□□□ -0.57
CUX1-207ENST00000465461 FAM181AQ8N9Y4 354 aa11.52□□□□□ -0.57
CUX1-207ENST00000465461 OR13J1Q8NGT2 312 aa11.52□□□□□ -0.57
CUX1-207ENST00000465461 HDAC10Q969S8 669 aa11.52□□□□□ -0.57
CUX1-207ENST00000465461 BOCQ9BWV1 1114 aa11.52□□□□□ -0.57
CUX1-207ENST00000465461 GSDMCQ9BYG8 508 aa11.52□□□□□ -0.57
CUX1-207ENST00000465461 TRIM31Q9BZY9 425 aa11.52□□□□□ -0.57
CUX1-207ENST00000465461 TRNAU1APQ9NX07 287 aaKnown RBP11.52□□□□□ -0.57
CUX1-207ENST00000465461 ASIC3Q9UHC3 531 aa11.52□□□□□ -0.57
CUX1-207ENST00000465461 PCYOX1Q9UHG3 505 aa11.52□□□□□ -0.57
CUX1-207ENST00000465461 CRLS1Q9UJA2 301 aa11.52□□□□□ -0.57
CUX1-207ENST00000465461 APPL1Q9UKG1 709 aa11.52□□□□□ -0.57
CUX1-207ENST00000465461 DNAJC16Q9Y2G8 782 aa11.52□□□□□ -0.57
CUX1-207ENST00000465461 TCAF1Q9Y4C2 921 aa11.52□□□□□ -0.57
CUX1-207ENST00000465461 SLC30A1Q9Y6M5 507 aa11.52□□□□□ -0.57
CUX1-207ENST00000465461 ZNF106Q9H2Y7 1883 aaKnown RBP11.52□□□□□ -0.57
CUX1-207ENST00000465461 FAM149AA5PLN7 773 aa11.51□□□□□ -0.57
CUX1-207ENST00000465461 CHUKO15111 745 aa11.51□□□□□ -0.57
CUX1-207ENST00000465461 NOBOXO60393 691 aa11.51□□□□□ -0.57
CUX1-207ENST00000465461 RFPL3O75679 317 aa11.51□□□□□ -0.57
CUX1-207ENST00000465461 URI1O94763 535 aaPredicted RBP11.51□□□□□ -0.57
CUX1-207ENST00000465461 GOT2P00505 430 aaKnown RBP11.51□□□□□ -0.57
CUX1-207ENST00000465461 ACP1P24666 158 aa11.51□□□□□ -0.57
CUX1-207ENST00000465461 AKT1P31749 480 aa11.51□□□□□ -0.57
CUX1-207ENST00000465461 HADHAP40939 763 aa11.51□□□□□ -0.57
CUX1-207ENST00000465461 MAGEA6P43360 314 aa11.51□□□□□ -0.57
CUX1-207ENST00000465461 NPY2RP49146 381 aa11.51□□□□□ -0.57
CUX1-207ENST00000465461 MAZP56270 477 aaKnown RBP11.51□□□□□ -0.57
CUX1-207ENST00000465461 B4GALNT1Q00973 533 aa11.51□□□□□ -0.57
CUX1-207ENST00000465461 DR1Q01658 176 aa11.51□□□□□ -0.57
CUX1-207ENST00000465461 SKIDA1Q1XH10 827 aa11.51□□□□□ -0.57
CUX1-207ENST00000465461 PCID2Q5JVF3 399 aa11.51□□□□□ -0.57
CUX1-207ENST00000465461 RNASEH2BQ5TBB1 312 aaKnown RBP11.51□□□□□ -0.57
CUX1-207ENST00000465461 TMEM220Q6QAJ8 160 aa11.51□□□□□ -0.57
CUX1-207ENST00000465461 ERMP1Q7Z2K6 904 aa11.51□□□□□ -0.57
CUX1-207ENST00000465461 EFL1Q7Z2Z2 1120 aaKnown RBP11.51□□□□□ -0.57
CUX1-207ENST00000465461 SNX20Q7Z614 316 aa11.51□□□□□ -0.57
CUX1-207ENST00000465461 JAMLQ86YT9 394 aa11.51□□□□□ -0.57
CUX1-207ENST00000465461 PIANPQ8IYJ0 282 aa11.51□□□□□ -0.57
CUX1-207ENST00000465461 AGGF1Q8N302 714 aaeCLIP11.51□□□□□ -0.57
CUX1-207ENST00000465461 ARL10Q8N8L6 244 aa11.51□□□□□ -0.57
CUX1-207ENST00000465461 NAT8LQ8N9F0 302 aa11.51□□□□□ -0.57
CUX1-207ENST00000465461 DDHD1Q8NEL9 900 aa11.51□□□□□ -0.57
CUX1-207ENST00000465461 SPATA4Q8NEY3 305 aa11.51□□□□□ -0.57
CUX1-207ENST00000465461 PPHLN1Q8NEY8 458 aaKnown RBP11.51□□□□□ -0.57
CUX1-207ENST00000465461 IFI44Q8TCB0 444 aa11.51□□□□□ -0.57
CUX1-207ENST00000465461 DTX3LQ8TDB6 740 aa11.51□□□□□ -0.57
CUX1-207ENST00000465461 ZDHHC1Q8WTX9 485 aa11.51□□□□□ -0.57
CUX1-207ENST00000465461 SCG3Q8WXD2 468 aaKnown RBP11.51□□□□□ -0.57
CUX1-207ENST00000465461 SGF29Q96ES7 293 aa11.51□□□□□ -0.57
CUX1-207ENST00000465461 PWWP2AQ96N64 755 aa11.51□□□□□ -0.57
CUX1-207ENST00000465461 TTC25Q96NG3 672 aa11.51□□□□□ -0.57
CUX1-207ENST00000465461 RANBP9Q96S59 729 aa11.51□□□□□ -0.57
CUX1-207ENST00000465461 KLC4Q9NSK0 619 aa11.51□□□□□ -0.57
CUX1-207ENST00000465461 BFARQ9NZS9 450 aa11.51□□□□□ -0.57
CUX1-207ENST00000465461 RNF14Q9UBS8 474 aa11.51□□□□□ -0.57
CUX1-207ENST00000465461 RABGEF1Q9UJ41 708 aa11.51□□□□□ -0.57
CUX1-207ENST00000465461 PADI4Q9UM07 663 aa11.51□□□□□ -0.57
CUX1-207ENST00000465461 APOBEC2Q9Y235 224 aaKnown RBP11.51□□□□□ -0.57
CUX1-207ENST00000465461 CNOT1A5YKK6 2376 aaKnown RBP11.51□□□□□ -0.57
CUX1-207ENST00000465461 AGAP14A8MT82 685 aa11.5□□□□□ -0.57
CUX1-207ENST00000465461 H7C0S8 307 aa11.5□□□□□ -0.57
CUX1-207ENST00000465461 CCDC188H7C350 402 aa11.5□□□□□ -0.57
CUX1-207ENST00000465461 DNALI1O14645 258 aaPredicted RBP11.5□□□□□ -0.57
CUX1-207ENST00000465461 VEGFDO43915 354 aa11.5□□□□□ -0.57
CUX1-207ENST00000465461 BANF1O75531 89 aa11.5□□□□□ -0.57
CUX1-207ENST00000465461 ZNF7P17097 686 aaPredicted RBP11.5□□□□□ -0.57
CUX1-207ENST00000465461 MSH3P20585 1137 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms