RNA–Protein interactions for RNA: ENST00000464616.6

GARNL3-213, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-213ENST00000464616 PLOD3O60568 738 aa3.12□□□□□ -1.91
GARNL3-213ENST00000464616 ZG16O60844 167 aa3.12□□□□□ -1.91
GARNL3-213ENST00000464616 JRKO75564 520 aa3.12□□□□□ -1.91
GARNL3-213ENST00000464616 RGS11O94810 467 aa3.12□□□□□ -1.91
GARNL3-213ENST00000464616 CLTBP09497 229 aa3.12□□□□□ -1.91
GARNL3-213ENST00000464616 UBA1P22314 1058 aaKnown RBP3.12□□□□□ -1.91
GARNL3-213ENST00000464616 CDKN1AP38936 164 aa3.12□□□□□ -1.91
GARNL3-213ENST00000464616 EIF2DP41214 584 aaKnown RBP3.12□□□□□ -1.91
GARNL3-213ENST00000464616 UBA7P41226 1012 aa3.12□□□□□ -1.91
GARNL3-213ENST00000464616 SLC15A1P46059 708 aa3.12□□□□□ -1.91
GARNL3-213ENST00000464616 FASLGP48023 281 aa3.12□□□□□ -1.91
GARNL3-213ENST00000464616 FMO5P49326 533 aa3.12□□□□□ -1.91
GARNL3-213ENST00000464616 HSD17B4P51659 736 aa3.12□□□□□ -1.91
GARNL3-213ENST00000464616 ARSEP51690 589 aa3.12□□□□□ -1.91
GARNL3-213ENST00000464616 EFNA5P52803 228 aa3.12□□□□□ -1.91
GARNL3-213ENST00000464616 ILF3Q12906 894 aaKnown RBP eCLIP3.12□□□□□ -1.91
GARNL3-213ENST00000464616 PSMD6Q15008 389 aa3.12□□□□□ -1.91
GARNL3-213ENST00000464616 ATP13A5Q4VNC0 1218 aa3.12□□□□□ -1.91
GARNL3-213ENST00000464616 NAA16Q6N069 864 aaPredicted RBP3.12□□□□□ -1.91
GARNL3-213ENST00000464616 SLC30A6Q6NXT4 461 aa3.12□□□□□ -1.91
GARNL3-213ENST00000464616 CCNI2Q6ZMN8 369 aaPredicted RBP3.12□□□□□ -1.91
GARNL3-213ENST00000464616 SMIM29Q86T20 159 aa3.12□□□□□ -1.91
GARNL3-213ENST00000464616 TDRPQ86YL5 185 aa3.12□□□□□ -1.91
GARNL3-213ENST00000464616 DHX40Q8IX18 779 aaKnown RBP3.12□□□□□ -1.91
GARNL3-213ENST00000464616 WDTC1Q8N5D0 677 aa3.12□□□□□ -1.91
GARNL3-213ENST00000464616 ZNF441Q8N8Z8 693 aa3.12□□□□□ -1.91
GARNL3-213ENST00000464616 WDSUB1Q8N9V3 476 aa3.12□□□□□ -1.91
GARNL3-213ENST00000464616 ARRDC2Q8TBH0 407 aa3.12□□□□□ -1.91
GARNL3-213ENST00000464616 PRPF31Q8WWY3 499 aaKnown RBP3.12□□□□□ -1.91
GARNL3-213ENST00000464616 SAT2Q96F10 170 aaPredicted RBP3.12□□□□□ -1.91
GARNL3-213ENST00000464616 NEUROD6Q96NK8 337 aa3.12□□□□□ -1.91
GARNL3-213ENST00000464616 SERINC2Q96SA4 455 aa3.12□□□□□ -1.91
GARNL3-213ENST00000464616 KXD1Q9BQD3 176 aa3.12□□□□□ -1.91
GARNL3-213ENST00000464616 HEMGNQ9BXL5 484 aa3.12□□□□□ -1.91
GARNL3-213ENST00000464616 PDZD7Q9H5P4 517 aa3.12□□□□□ -1.91
GARNL3-213ENST00000464616 EBF2Q9HAK2 575 aa3.12□□□□□ -1.91
GARNL3-213ENST00000464616 RANGRFQ9HD47 186 aaPredicted RBP3.12□□□□□ -1.91
GARNL3-213ENST00000464616 ABCF3Q9NUQ8 709 aa3.12□□□□□ -1.91
GARNL3-213ENST00000464616 CPSF2Q9P2I0 782 aaKnown RBP3.12□□□□□ -1.91
GARNL3-213ENST00000464616 SUCLA2Q9P2R7 463 aaPredicted RBP3.12□□□□□ -1.91
GARNL3-213ENST00000464616 SLC9A2Q9UBY0 812 aa3.12□□□□□ -1.91
GARNL3-213ENST00000464616 CFDP1Q9UEE9 299 aaPredicted RBP3.12□□□□□ -1.91
GARNL3-213ENST00000464616 SEC63Q9UGP8 760 aaKnown RBP3.12□□□□□ -1.91
GARNL3-213ENST00000464616 NFE2L3Q9Y4A8 694 aa3.12□□□□□ -1.91
GARNL3-213ENST00000464616 J3KR12 359 aa3.11□□□□□ -1.91
GARNL3-213ENST00000464616 DVL1O14640 695 aa3.11□□□□□ -1.91
GARNL3-213ENST00000464616 MAP2K7O14733 419 aa3.11□□□□□ -1.91
GARNL3-213ENST00000464616 HSPA12AO43301 675 aa3.11□□□□□ -1.91
GARNL3-213ENST00000464616 EDIL3O43854 480 aa3.11□□□□□ -1.91
GARNL3-213ENST00000464616 SEC31AO94979 1220 aaKnown RBP3.11□□□□□ -1.91
GARNL3-213ENST00000464616 NKX2-2O95096 273 aa3.11□□□□□ -1.91
GARNL3-213ENST00000464616 APOHP02749 345 aaPredicted RBP3.11□□□□□ -1.91
GARNL3-213ENST00000464616 PON1P27169 355 aa3.11□□□□□ -1.91
GARNL3-213ENST00000464616 EEF1DP29692 281 aaKnown RBP3.11□□□□□ -1.91
GARNL3-213ENST00000464616 PIGAP37287 484 aa3.11□□□□□ -1.91
GARNL3-213ENST00000464616 GLIPR1P48060 266 aa3.11□□□□□ -1.91
GARNL3-213ENST00000464616 CAMPP49913 170 aa3.11□□□□□ -1.91
GARNL3-213ENST00000464616 METAP2P50579 478 aaKnown RBP eCLIP3.11□□□□□ -1.91
GARNL3-213ENST00000464616 DVL1P1P54792 670 aaPredicted RBP3.11□□□□□ -1.91
GARNL3-213ENST00000464616 PRPF4BQ13523 1007 aaKnown RBP3.11□□□□□ -1.91
GARNL3-213ENST00000464616 KRT71Q3SY84 523 aa3.11□□□□□ -1.91
GARNL3-213ENST00000464616 AMZ1Q400G9 498 aa3.11□□□□□ -1.91
GARNL3-213ENST00000464616 GKAP1Q5VSY0 366 aaPredicted RBP3.11□□□□□ -1.91
GARNL3-213ENST00000464616 PLA2G4FQ68DD2 849 aa3.11□□□□□ -1.91
GARNL3-213ENST00000464616 KCTD18Q6PI47 426 aaPredicted RBP3.11□□□□□ -1.91
GARNL3-213ENST00000464616 ENOSF1Q7L5Y1 443 aa3.11□□□□□ -1.91
GARNL3-213ENST00000464616 SLC9B2Q86UD5 537 aa3.11□□□□□ -1.91
GARNL3-213ENST00000464616 DSELQ8IZU8 1212 aa3.11□□□□□ -1.91
GARNL3-213ENST00000464616 LSMEM1Q8N8F7 131 aa3.11□□□□□ -1.91
GARNL3-213ENST00000464616 CNBD1Q8NA66 436 aa3.11□□□□□ -1.91
GARNL3-213ENST00000464616 POC5Q8NA72 575 aa3.11□□□□□ -1.91
GARNL3-213ENST00000464616 ZNF485Q8NCK3 441 aa3.11□□□□□ -1.91
GARNL3-213ENST00000464616 TRPC4APQ8TEL6 797 aa3.11□□□□□ -1.91
GARNL3-213ENST00000464616 PERPQ96FX8 193 aa3.11□□□□□ -1.91
GARNL3-213ENST00000464616 PGLYRP2Q96PD5 576 aa3.11□□□□□ -1.91
GARNL3-213ENST00000464616 SLF1Q9BQI6 1058 aa3.11□□□□□ -1.91
GARNL3-213ENST00000464616 PCGF1Q9BSM1 259 aa3.11□□□□□ -1.91
GARNL3-213ENST00000464616 KIFC3Q9BVG8 833 aa3.11□□□□□ -1.91
GARNL3-213ENST00000464616 MOV10L1Q9BXT6 1211 aaKnown RBP3.11□□□□□ -1.91
GARNL3-213ENST00000464616 BARHL1Q9BZE3 327 aa3.11□□□□□ -1.91
GARNL3-213ENST00000464616 LTB4R2Q9NPC1 389 aa3.11□□□□□ -1.91
GARNL3-213ENST00000464616 CISD1Q9NZ45 108 aaKnown RBP3.11□□□□□ -1.91
GARNL3-213ENST00000464616 CTNNAL1Q9UBT7 734 aa3.11□□□□□ -1.91
GARNL3-213ENST00000464616 KCNS2Q9ULS6 477 aa3.11□□□□□ -1.91
GARNL3-213ENST00000464616 TTC7AQ9ULT0 858 aaPredicted RBP3.11□□□□□ -1.91
GARNL3-213ENST00000464616 NENFQ9UMX5 172 aa3.11□□□□□ -1.91
GARNL3-213ENST00000464616 CDC14AQ9UNH5 594 aa3.11□□□□□ -1.91
GARNL3-213ENST00000464616 MMP24Q9Y5R2 645 aa3.11□□□□□ -1.91
GARNL3-213ENST00000464616 FAM237AA0A1B0GTK4 181 aa3.1□□□□□ -1.91
GARNL3-213ENST00000464616 IPO8O15397 1037 aaKnown RBP3.1□□□□□ -1.91
GARNL3-213ENST00000464616 OGG1O15527 345 aa3.1□□□□□ -1.91
GARNL3-213ENST00000464616 AHCYL1O43865 530 aa3.1□□□□□ -1.91
GARNL3-213ENST00000464616 KLK8O60259 260 aa3.1□□□□□ -1.91
GARNL3-213ENST00000464616 OR2C1O95371 312 aa3.1□□□□□ -1.91
GARNL3-213ENST00000464616 TBX6O95947 436 aaPredicted RBP3.1□□□□□ -1.91
GARNL3-213ENST00000464616 PAK4O96013 591 aaPredicted RBP3.1□□□□□ -1.91
GARNL3-213ENST00000464616 SRCP12931 536 aa3.1□□□□□ -1.91
GARNL3-213ENST00000464616 GABRB1P18505 474 aa3.1□□□□□ -1.91
GARNL3-213ENST00000464616 ITGAXP20702 1163 aa3.1□□□□□ -1.91
GARNL3-213ENST00000464616 IL11P20809 199 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms