RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 CHRNA6Q15825 494 aa14.26□□□□□ -0.13
SMC1A-204ENST00000463684 PAPD7Q5XG87 772 aaKnown RBP14.26□□□□□ -0.13
SMC1A-204ENST00000463684 PLEKHA7Q6IQ23 1121 aa14.26□□□□□ -0.13
SMC1A-204ENST00000463684 CYP4V2Q6ZWL3 525 aaPredicted RBP14.26□□□□□ -0.13
SMC1A-204ENST00000463684 SYVN1Q86TM6 617 aa14.26□□□□□ -0.13
SMC1A-204ENST00000463684 CCHCR1Q8TD31 782 aa14.26□□□□□ -0.13
SMC1A-204ENST00000463684 FCRL4Q96PJ5 515 aa14.26□□□□□ -0.13
SMC1A-204ENST00000463684 ETNK2Q9NVF9 386 aa14.26□□□□□ -0.13
SMC1A-204ENST00000463684 PKD2L2Q9NZM6 624 aa14.26□□□□□ -0.13
SMC1A-204ENST00000463684 ATXN10Q9UBB4 475 aa14.26□□□□□ -0.13
SMC1A-204ENST00000463684 RARRES3Q9UL19 164 aa14.26□□□□□ -0.13
SMC1A-204ENST00000463684 CHKBQ9Y259 395 aa14.26□□□□□ -0.13
SMC1A-204ENST00000463684 SIK3Q9Y2K2 1263 aa14.26□□□□□ -0.13
SMC1A-204ENST00000463684 PDZK1P1A8MUH7 402 aa14.25□□□□□ -0.13
SMC1A-204ENST00000463684 FADS2P1A8MWK0 482 aa14.25□□□□□ -0.13
SMC1A-204ENST00000463684 TMCO5BA8MYB1 307 aa14.25□□□□□ -0.13
SMC1A-204ENST00000463684 MTA2O94776 668 aa14.25□□□□□ -0.13
SMC1A-204ENST00000463684 CLDN1O95832 211 aa14.25□□□□□ -0.13
SMC1A-204ENST00000463684 FERP16591 822 aa14.25□□□□□ -0.13
SMC1A-204ENST00000463684 NELFEP18615 380 aaKnown RBP14.25□□□□□ -0.13
SMC1A-204ENST00000463684 SLC19A1P41440 591 aa14.25□□□□□ -0.13
SMC1A-204ENST00000463684 SPINT3P49223 89 aa14.25□□□□□ -0.13
SMC1A-204ENST00000463684 TUBB3Q13509 450 aa14.25□□□□□ -0.13
SMC1A-204ENST00000463684 INSCQ1MX18 579 aa14.25□□□□□ -0.13
SMC1A-204ENST00000463684 ANKRD20A8PQ5CZ79 823 aa14.25□□□□□ -0.13
SMC1A-204ENST00000463684 HENMT1Q5T8I9 393 aaKnown RBP14.25□□□□□ -0.13
SMC1A-204ENST00000463684 CPZQ66K79 652 aa14.25□□□□□ -0.13
SMC1A-204ENST00000463684 IRGCQ6NXR0 463 aa14.25□□□□□ -0.13
SMC1A-204ENST00000463684 JMJD6Q6NYC1 403 aaPredicted RBP14.25□□□□□ -0.13
SMC1A-204ENST00000463684 FAM199XQ6PEV8 388 aaPredicted RBP14.25□□□□□ -0.13
SMC1A-204ENST00000463684 FAM92BQ6ZTR7 304 aa14.25□□□□□ -0.13
SMC1A-204ENST00000463684 POLNQ7Z5Q5 900 aa14.25□□□□□ -0.13
SMC1A-204ENST00000463684 BPHLQ86WA6 291 aaPredicted RBP14.25□□□□□ -0.13
SMC1A-204ENST00000463684 HPS6Q86YV9 775 aa14.25□□□□□ -0.13
SMC1A-204ENST00000463684 LRRC49Q8IUZ0 686 aa14.25□□□□□ -0.13
SMC1A-204ENST00000463684 RBM12BQ8IXT5 1001 aaKnown RBP14.25□□□□□ -0.13
SMC1A-204ENST00000463684 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.25□□□□□ -0.13
SMC1A-204ENST00000463684 TEX26Q8N6G2 289 aa14.25□□□□□ -0.13
SMC1A-204ENST00000463684 SIDT2Q8NBJ9 832 aaKnown RBP14.25□□□□□ -0.13
SMC1A-204ENST00000463684 HSPH1Q92598 858 aa14.25□□□□□ -0.13
SMC1A-204ENST00000463684 WDR24Q96S15 920 aa14.25□□□□□ -0.13
SMC1A-204ENST00000463684 OR2AG1Q9H205 316 aa14.25□□□□□ -0.13
SMC1A-204ENST00000463684 IGSF5Q9NSI5 407 aa14.25□□□□□ -0.13
SMC1A-204ENST00000463684 HAUS2Q9NVX0 235 aa14.25□□□□□ -0.13
SMC1A-204ENST00000463684 TAS2R14Q9NYV8 317 aa14.25□□□□□ -0.13
SMC1A-204ENST00000463684 SCHIP1Q9P0W5 487 aaPredicted RBP14.25□□□□□ -0.13
SMC1A-204ENST00000463684 FARSAQ9Y285 508 aaKnown RBP14.25□□□□□ -0.13
SMC1A-204ENST00000463684 C1orf232A0A0U1RR37 186 aa14.24□□□□□ -0.13
SMC1A-204ENST00000463684 RGSL1A5PLK6 1076 aa14.24□□□□□ -0.13
SMC1A-204ENST00000463684 WIPF3A6NGB9 483 aa14.24□□□□□ -0.13
SMC1A-204ENST00000463684 GPR89AB7ZAQ6 455 aa14.24□□□□□ -0.13
SMC1A-204ENST00000463684 ATMINO43313 823 aaPredicted RBP14.24□□□□□ -0.13
SMC1A-204ENST00000463684 SLC25A14O95258 325 aaPredicted RBP14.24□□□□□ -0.13
SMC1A-204ENST00000463684 TIAF1O95411 115 aa14.24□□□□□ -0.13
SMC1A-204ENST00000463684 GPR89BP0CG08 455 aa14.24□□□□□ -0.13
SMC1A-204ENST00000463684 ZNF8P17098 575 aaPredicted RBP14.24□□□□□ -0.13
SMC1A-204ENST00000463684 CAPZBP47756 277 aa14.24□□□□□ -0.13
SMC1A-204ENST00000463684 RPL26P61254 145 aaKnown RBP14.24□□□□□ -0.13
SMC1A-204ENST00000463684 RPS18P62269 152 aaKnown RBP14.24□□□□□ -0.13
SMC1A-204ENST00000463684 SEPT7Q16181 437 aaKnown RBP14.24□□□□□ -0.13
SMC1A-204ENST00000463684 DPYSL2Q16555 572 aa14.24□□□□□ -0.13
SMC1A-204ENST00000463684 BOLA3Q53S33 107 aa14.24□□□□□ -0.13
SMC1A-204ENST00000463684 TDRD12Q587J7 1177 aaKnown RBP14.24□□□□□ -0.13
SMC1A-204ENST00000463684 PWWP2BQ6NUJ5 590 aa14.24□□□□□ -0.13
SMC1A-204ENST00000463684 RHOT1Q8IXI2 618 aa14.24□□□□□ -0.13
SMC1A-204ENST00000463684 LPCAT1Q8NF37 534 aa14.24□□□□□ -0.13
SMC1A-204ENST00000463684 RSC1A1Q92681 617 aa14.24□□□□□ -0.13
SMC1A-204ENST00000463684 CSPG4P5Q96PW8 444 aa14.24□□□□□ -0.13
SMC1A-204ENST00000463684 RUFY1Q96T51 708 aa14.24□□□□□ -0.13
SMC1A-204ENST00000463684 MFRPQ9BY79 579 aa14.24□□□□□ -0.13
SMC1A-204ENST00000463684 CLSTN2Q9H4D0 955 aa14.24□□□□□ -0.13
SMC1A-204ENST00000463684 TRIM39Q9HCM9 518 aa14.24□□□□□ -0.13
SMC1A-204ENST00000463684 POT1Q9NUX5 634 aa14.24□□□□□ -0.13
SMC1A-204ENST00000463684 LUZP4Q9P127 313 aa14.24□□□□□ -0.13
SMC1A-204ENST00000463684 ZNF624Q9P2J8 865 aaPredicted RBP14.24□□□□□ -0.13
SMC1A-204ENST00000463684 EPHA6Q9UF33 1036 aa14.24□□□□□ -0.13
SMC1A-204ENST00000463684 RPL26L1Q9UNX3 145 aaKnown RBP14.24□□□□□ -0.13
SMC1A-204ENST00000463684 ITPR2Q14571 2701 aa14.23□□□□□ -0.13
SMC1A-204ENST00000463684 KMOO15229 486 aa14.23□□□□□ -0.13
SMC1A-204ENST00000463684 TNFRSF8P28908 595 aa14.23□□□□□ -0.13
SMC1A-204ENST00000463684 PCK1P35558 622 aa14.23□□□□□ -0.13
SMC1A-204ENST00000463684 ARL4DP49703 201 aa14.23□□□□□ -0.13
SMC1A-204ENST00000463684 ACY1Q03154 408 aa14.23□□□□□ -0.13
SMC1A-204ENST00000463684 SMTNL2Q2TAL5 461 aa14.23□□□□□ -0.13
SMC1A-204ENST00000463684 PRR30Q53SZ7 412 aaPredicted RBP14.23□□□□□ -0.13
SMC1A-204ENST00000463684 CRTC3Q6UUV7 619 aa14.23□□□□□ -0.13
SMC1A-204ENST00000463684 TICAM1Q8IUC6 712 aa14.23□□□□□ -0.13
SMC1A-204ENST00000463684 ENOX1Q8TC92 643 aaKnown RBP14.23□□□□□ -0.13
SMC1A-204ENST00000463684 UBXN4Q92575 508 aa14.23□□□□□ -0.13
SMC1A-204ENST00000463684 CXorf40BQ96DE9 158 aa14.23□□□□□ -0.13
SMC1A-204ENST00000463684 LYSMD1Q96S90 227 aa14.23□□□□□ -0.13
SMC1A-204ENST00000463684 SPATA16Q9BXB7 569 aa14.23□□□□□ -0.13
SMC1A-204ENST00000463684 TDRD1Q9BXT4 1180 aaKnown RBP14.23□□□□□ -0.13
SMC1A-204ENST00000463684 TRIM7Q9C029 511 aa14.23□□□□□ -0.13
SMC1A-204ENST00000463684 RAB33BQ9H082 229 aa14.23□□□□□ -0.13
SMC1A-204ENST00000463684 AKIRIN1Q9H9L7 192 aaPredicted RBP14.23□□□□□ -0.13
SMC1A-204ENST00000463684 PCDH9Q9HC56 1237 aa14.23□□□□□ -0.13
SMC1A-204ENST00000463684 SLC40A1Q9NP59 571 aa14.23□□□□□ -0.13
SMC1A-204ENST00000463684 ARFGAP3Q9NP61 516 aa14.23□□□□□ -0.13
SMC1A-204ENST00000463684 ERRFI1Q9UJM3 462 aaPredicted RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms