RNA–Protein interactions for RNA: ENST00000463503.5

SSR3-202, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 596 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-202ENST00000463503 GSRP00390 522 aa11.09□□□□□ -0.63
SSR3-202ENST00000463503 CCNB1P14635 433 aa11.09□□□□□ -0.63
SSR3-202ENST00000463503 CES1P23141 567 aa11.09□□□□□ -0.63
SSR3-202ENST00000463503 COL8A1P27658 744 aa11.09□□□□□ -0.63
SSR3-202ENST00000463503 TNFRSF8P28908 595 aa11.09□□□□□ -0.63
SSR3-202ENST00000463503 CSF2RBP32927 897 aa11.09□□□□□ -0.63
SSR3-202ENST00000463503 ATP5OP48047 213 aa11.09□□□□□ -0.63
SSR3-202ENST00000463503 CSNK1DP48730 415 aa11.09□□□□□ -0.63
SSR3-202ENST00000463503 FNTAP49354 379 aa11.09□□□□□ -0.63
SSR3-202ENST00000463503 CKAP4Q07065 602 aaKnown RBP11.09□□□□□ -0.63
SSR3-202ENST00000463503 LBRQ14739 615 aaKnown RBP11.09□□□□□ -0.63
SSR3-202ENST00000463503 SLC14A2Q15849 920 aa11.09□□□□□ -0.63
SSR3-202ENST00000463503 TEX44Q53QW1 395 aa11.09□□□□□ -0.63
SSR3-202ENST00000463503 ATP1A1-AS1Q5TC04 95 aa11.09□□□□□ -0.63
SSR3-202ENST00000463503 MARC1Q5VT66 337 aa11.09□□□□□ -0.63
SSR3-202ENST00000463503 ENPP7Q6UWV6 458 aa11.09□□□□□ -0.63
SSR3-202ENST00000463503 PIM3Q86V86 326 aa11.09□□□□□ -0.63
SSR3-202ENST00000463503 C17orf82Q86X59 251 aaPredicted RBP11.09□□□□□ -0.63
SSR3-202ENST00000463503 BBS5Q8N3I7 341 aa11.09□□□□□ -0.63
SSR3-202ENST00000463503 BMPERQ8N8U9 685 aa11.09□□□□□ -0.63
SSR3-202ENST00000463503 GALNT11Q8NCW6 608 aa11.09□□□□□ -0.63
SSR3-202ENST00000463503 CCNYQ8ND76 341 aa11.09□□□□□ -0.63
SSR3-202ENST00000463503 APOBEC4Q8WW27 367 aaKnown RBP11.09□□□□□ -0.63
SSR3-202ENST00000463503 OR1E3Q8WZA6 343 aa11.09□□□□□ -0.63
SSR3-202ENST00000463503 FUBP1Q96AE4 644 aaKnown RBP11.09□□□□□ -0.63
SSR3-202ENST00000463503 KLHL32Q96NJ5 620 aa11.09□□□□□ -0.63
SSR3-202ENST00000463503 WRAP53Q9BUR4 548 aaKnown RBP11.09□□□□□ -0.63
SSR3-202ENST00000463503 OSBPL1AQ9BXW6 950 aa11.09□□□□□ -0.63
SSR3-202ENST00000463503 FGF22Q9HCT0 170 aa11.09□□□□□ -0.63
SSR3-202ENST00000463503 PCYOX1Q9UHG3 505 aa11.09□□□□□ -0.63
SSR3-202ENST00000463503 FEZ2Q9UHY8 353 aaPredicted RBP11.09□□□□□ -0.63
SSR3-202ENST00000463503 TRHDEQ9UKU6 1024 aa11.09□□□□□ -0.63
SSR3-202ENST00000463503 DNPEPQ9ULA0 475 aa11.09□□□□□ -0.63
SSR3-202ENST00000463503 ATP8A1Q9Y2Q0 1164 aa11.09□□□□□ -0.63
SSR3-202ENST00000463503 COQ6Q9Y2Z9 468 aa11.09□□□□□ -0.63
SSR3-202ENST00000463503 LOC101059948A0A1B0GTJ6 334 aa11.08□□□□□ -0.64
SSR3-202ENST00000463503 C5orf60A6NFR6 353 aa11.08□□□□□ -0.64
SSR3-202ENST00000463503 PDE2AO00408 941 aaPredicted RBP11.08□□□□□ -0.64
SSR3-202ENST00000463503 URI1O94763 535 aaPredicted RBP11.08□□□□□ -0.64
SSR3-202ENST00000463503 TMCC1O94876 653 aa11.08□□□□□ -0.64
SSR3-202ENST00000463503 THRAP10827 490 aa11.08□□□□□ -0.64
SSR3-202ENST00000463503 RBL1P28749 1068 aa11.08□□□□□ -0.64
SSR3-202ENST00000463503 MAZP56270 477 aaKnown RBP11.08□□□□□ -0.64
SSR3-202ENST00000463503 OR1D5P58170 312 aa11.08□□□□□ -0.64
SSR3-202ENST00000463503 AP1B1Q10567 949 aa11.08□□□□□ -0.64
SSR3-202ENST00000463503 WASHC5Q12768 1159 aa11.08□□□□□ -0.64
SSR3-202ENST00000463503 ARHGEF7Q14155 803 aa11.08□□□□□ -0.64
SSR3-202ENST00000463503 LRRC14Q15048 493 aa11.08□□□□□ -0.64
SSR3-202ENST00000463503 CYTH1Q15438 398 aa11.08□□□□□ -0.64
SSR3-202ENST00000463503 CLPPQ16740 277 aaPredicted RBP11.08□□□□□ -0.64
SSR3-202ENST00000463503 DEFB109BQ30KR1 87 aa11.08□□□□□ -0.64
SSR3-202ENST00000463503 P3H1Q32P28 736 aa11.08□□□□□ -0.64
SSR3-202ENST00000463503 DARS2Q6PI48 645 aaKnown RBP11.08□□□□□ -0.64
SSR3-202ENST00000463503 C4orf22Q6V702 233 aa11.08□□□□□ -0.64
SSR3-202ENST00000463503 ZC3H18Q86VM9 953 aaKnown RBP11.08□□□□□ -0.64
SSR3-202ENST00000463503 ZNF354CQ86Y25 554 aa11.08□□□□□ -0.64
SSR3-202ENST00000463503 KLHDC8BQ8IXV7 354 aa11.08□□□□□ -0.64
SSR3-202ENST00000463503 FAM46DQ8NEK8 389 aa11.08□□□□□ -0.64
SSR3-202ENST00000463503 OR2AP1Q8NGE2 309 aa11.08□□□□□ -0.64
SSR3-202ENST00000463503 ATL2Q8NHH9 583 aa11.08□□□□□ -0.64
SSR3-202ENST00000463503 CCL4L1Q8NHW4 92 aa11.08□□□□□ -0.64
SSR3-202ENST00000463503 CXorf40AQ8TE69 158 aa11.08□□□□□ -0.64
SSR3-202ENST00000463503 STARD8Q92502 1023 aa11.08□□□□□ -0.64
SSR3-202ENST00000463503 WDR92Q96MX6 357 aa11.08□□□□□ -0.64
SSR3-202ENST00000463503 MGME1Q9BQP7 344 aa11.08□□□□□ -0.64
SSR3-202ENST00000463503 APOOQ9BUR5 198 aa11.08□□□□□ -0.64
SSR3-202ENST00000463503 L2HGDHQ9H9P8 463 aa11.08□□□□□ -0.64
SSR3-202ENST00000463503 GPN2Q9H9Y4 310 aaPredicted RBP11.08□□□□□ -0.64
SSR3-202ENST00000463503 MRPL40Q9NQ50 206 aaKnown RBP11.08□□□□□ -0.64
SSR3-202ENST00000463503 CUEDC1Q9NWM3 386 aaPredicted RBP11.08□□□□□ -0.64
SSR3-202ENST00000463503 AKAP7Q9P0M2 348 aaPredicted RBP11.08□□□□□ -0.64
SSR3-202ENST00000463503 LHX3Q9UBR4 397 aa11.08□□□□□ -0.64
SSR3-202ENST00000463503 CROCCQ5TZA2 2017 aa11.08□□□□□ -0.64
SSR3-202ENST00000463503 TMEM202A6NGA9 273 aa11.07□□□□□ -0.64
SSR3-202ENST00000463503 MAP3K6O95382 1288 aa11.07□□□□□ -0.64
SSR3-202ENST00000463503 CLDN1O95832 211 aa11.07□□□□□ -0.64
SSR3-202ENST00000463503 PDGFAP04085 211 aa11.07□□□□□ -0.64
SSR3-202ENST00000463503 PTPN3P26045 913 aa11.07□□□□□ -0.64
SSR3-202ENST00000463503 HTR1BP28222 390 aa11.07□□□□□ -0.64
SSR3-202ENST00000463503 CD1CP29017 333 aa11.07□□□□□ -0.64
SSR3-202ENST00000463503 COILP38432 576 aaPredicted RBP11.07□□□□□ -0.64
SSR3-202ENST00000463503 MMP13P45452 471 aa11.07□□□□□ -0.64
SSR3-202ENST00000463503 LIMK2P53671 638 aa11.07□□□□□ -0.64
SSR3-202ENST00000463503 SNRPD1P62314 119 aaKnown RBP11.07□□□□□ -0.64
SSR3-202ENST00000463503 SLC10A7Q0GE19 358 aa11.07□□□□□ -0.64
SSR3-202ENST00000463503 INPP5AQ14642 412 aa11.07□□□□□ -0.64
SSR3-202ENST00000463503 GRM3Q14832 879 aa11.07□□□□□ -0.64
SSR3-202ENST00000463503 AGERQ15109 404 aa11.07□□□□□ -0.64
SSR3-202ENST00000463503 AMZ1Q400G9 498 aa11.07□□□□□ -0.64
SSR3-202ENST00000463503 CRTC2Q53ET0 693 aaPredicted RBP11.07□□□□□ -0.64
SSR3-202ENST00000463503 ATXN7L2Q5T6C5 722 aaPredicted RBP11.07□□□□□ -0.64
SSR3-202ENST00000463503 ANKS6Q68DC2 871 aa11.07□□□□□ -0.64
SSR3-202ENST00000463503 TCTN3Q6NUS6 607 aa11.07□□□□□ -0.64
SSR3-202ENST00000463503 TIPARPQ7Z3E1 657 aaKnown RBP11.07□□□□□ -0.64
SSR3-202ENST00000463503 UNC5BQ8IZJ1 945 aa11.07□□□□□ -0.64
SSR3-202ENST00000463503 NETO2Q8NC67 525 aa11.07□□□□□ -0.64
SSR3-202ENST00000463503 SPATA4Q8NEY3 305 aa11.07□□□□□ -0.64
SSR3-202ENST00000463503 GRK7Q8WTQ7 553 aa11.07□□□□□ -0.64
SSR3-202ENST00000463503 C1orf54Q8WWF1 131 aa11.07□□□□□ -0.64
SSR3-202ENST00000463503 ATG4AQ8WYN0 398 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms