RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 OR10A6Q8NH74 314 aa15.7■□□□□ 0.1
SMC4-204ENST00000462787 C9orf43Q8TAL5 461 aaPredicted RBP15.7■□□□□ 0.1
SMC4-204ENST00000462787 FUOMA2VDF0 154 aa15.7■□□□□ 0.1
SMC4-204ENST00000462787 ADAMDEC1O15204 470 aa15.7■□□□□ 0.1
SMC4-204ENST00000462787 RPP40O75818 363 aaKnown RBP15.7■□□□□ 0.1
SMC4-204ENST00000462787 IMPDH1P20839 514 aa15.7■□□□□ 0.1
SMC4-204ENST00000462787 SLC6A2P23975 617 aa15.7■□□□□ 0.1
SMC4-204ENST00000462787 CCNCP24863 283 aa15.7■□□□□ 0.1
SMC4-204ENST00000462787 STARP49675 285 aa15.7■□□□□ 0.1
SMC4-204ENST00000462787 ZNF404Q494X3 552 aa15.7■□□□□ 0.1
SMC4-204ENST00000462787 FBXO43Q4G163 708 aa15.7■□□□□ 0.1
SMC4-204ENST00000462787 RUNDC3AQ59EK9 446 aa15.7■□□□□ 0.1
SMC4-204ENST00000462787 ALDH16A1Q8IZ83 802 aa15.7■□□□□ 0.1
SMC4-204ENST00000462787 DAW1Q8N136 415 aa15.7■□□□□ 0.1
SMC4-204ENST00000462787 GLB1L3Q8NCI6 653 aaPredicted RBP15.7■□□□□ 0.1
SMC4-204ENST00000462787 FBXL20Q96IG2 436 aa15.7■□□□□ 0.1
SMC4-204ENST00000462787 RDH12Q96NR8 316 aa15.7■□□□□ 0.1
SMC4-204ENST00000462787 MRPL45Q9BRJ2 306 aaKnown RBP15.7■□□□□ 0.1
SMC4-204ENST00000462787 TINF2Q9BSI4 451 aa15.7■□□□□ 0.1
SMC4-204ENST00000462787 SPATA5L1Q9BVQ7 753 aa15.7■□□□□ 0.1
SMC4-204ENST00000462787 CLCA2Q9UQC9 943 aa15.7■□□□□ 0.1
SMC4-204ENST00000462787 ERVK-11Q9UQG0 969 aa15.7■□□□□ 0.1
SMC4-204ENST00000462787 PGRMC2O15173 223 aa15.7■□□□□ 0.1
SMC4-204ENST00000462787 PSIP1O75475 530 aaKnown RBP15.7■□□□□ 0.1
SMC4-204ENST00000462787 VNN1O95497 513 aa15.7■□□□□ 0.1
SMC4-204ENST00000462787 LPOP22079 712 aaPredicted RBP15.7■□□□□ 0.1
SMC4-204ENST00000462787 NOS3P29474 1203 aa15.7■□□□□ 0.1
SMC4-204ENST00000462787 HSF2Q03933 536 aa15.7■□□□□ 0.1
SMC4-204ENST00000462787 HSDL1Q3SXM5 330 aa15.7■□□□□ 0.1
SMC4-204ENST00000462787 ARMC12Q5T9G4 340 aa15.7■□□□□ 0.1
SMC4-204ENST00000462787 SYCE2Q6PIF2 218 aa15.7■□□□□ 0.1
SMC4-204ENST00000462787 ABHD15Q6UXT9 468 aa15.7■□□□□ 0.1
SMC4-204ENST00000462787 BORCS6Q96GS4 357 aa15.7■□□□□ 0.1
SMC4-204ENST00000462787 KCNS3Q9BQ31 491 aa15.7■□□□□ 0.1
SMC4-204ENST00000462787 SPATC1LQ9H0A9 340 aa15.7■□□□□ 0.1
SMC4-204ENST00000462787 PTCH2Q9Y6C5 1203 aa15.7■□□□□ 0.1
SMC4-204ENST00000462787 NPEPPSL1A6NEC2 478 aa15.69■□□□□ 0.1
SMC4-204ENST00000462787 BDNFP23560 247 aa15.69■□□□□ 0.1
SMC4-204ENST00000462787 IVDP26440 423 aa15.69■□□□□ 0.1
SMC4-204ENST00000462787 GNG2P59768 71 aa15.69■□□□□ 0.1
SMC4-204ENST00000462787 RELAQ04206 551 aa15.69■□□□□ 0.1
SMC4-204ENST00000462787 SIX1Q15475 284 aaPredicted RBP15.69■□□□□ 0.1
SMC4-204ENST00000462787 SHROOM1Q2M3G4 852 aaPredicted RBP15.69■□□□□ 0.1
SMC4-204ENST00000462787 MFSD14CQ5VZR4 134 aa15.69■□□□□ 0.1
SMC4-204ENST00000462787 WSCD1Q658N2 575 aa15.69■□□□□ 0.1
SMC4-204ENST00000462787 ZNF517Q6ZMY9 492 aaPredicted RBP15.69■□□□□ 0.1
SMC4-204ENST00000462787 PLPPR4Q7Z2D5 763 aa15.69■□□□□ 0.1
SMC4-204ENST00000462787 HDAC2Q92769 488 aaKnown RBP15.69■□□□□ 0.1
SMC4-204ENST00000462787 ABCB9Q9NP78 766 aa15.69■□□□□ 0.1
SMC4-204ENST00000462787 C12orf4Q9NQ89 552 aa15.69■□□□□ 0.1
SMC4-204ENST00000462787 COMMD9Q9P000 198 aa15.69■□□□□ 0.1
SMC4-204ENST00000462787 FABP12A6NFH5 140 aa15.69■□□□□ 0.1
SMC4-204ENST00000462787 H7C4K7 107 aa15.69■□□□□ 0.1
SMC4-204ENST00000462787 TSPAN4O14817 238 aa15.69■□□□□ 0.1
SMC4-204ENST00000462787 SLC30A4O14863 429 aa15.69■□□□□ 0.1
SMC4-204ENST00000462787 KLHL18O94889 574 aa15.69■□□□□ 0.1
SMC4-204ENST00000462787 FMO3P31513 532 aa15.69■□□□□ 0.1
SMC4-204ENST00000462787 KIR3DL1P43629 444 aa15.69■□□□□ 0.1
SMC4-204ENST00000462787 RORCP51449 518 aa15.69■□□□□ 0.1
SMC4-204ENST00000462787 KIAA0930Q6ICG6 404 aaPredicted RBP15.69■□□□□ 0.1
SMC4-204ENST00000462787 ATL1Q8WXF7 558 aa15.69■□□□□ 0.1
SMC4-204ENST00000462787 EFHD2Q96C19 240 aaPredicted RBP15.69■□□□□ 0.1
SMC4-204ENST00000462787 SLC45A3Q96JT2 553 aa15.69■□□□□ 0.1
SMC4-204ENST00000462787 ITPAQ9BY32 194 aa15.69■□□□□ 0.1
SMC4-204ENST00000462787 UXTQ9UBK9 157 aaPredicted RBP15.69■□□□□ 0.1
SMC4-204ENST00000462787 ST14Q9Y5Y6 855 aa15.69■□□□□ 0.1
SMC4-204ENST00000462787 MYOCOSA0A1B0GUC4 107 aa15.69■□□□□ 0.1
SMC4-204ENST00000462787 CASTOR2A6NHX0 329 aa15.69■□□□□ 0.1
SMC4-204ENST00000462787 ZNF701M0R085 212 aaPredicted RBP15.69■□□□□ 0.1
SMC4-204ENST00000462787 RNASEH2AO75792 299 aaKnown RBP15.69■□□□□ 0.1
SMC4-204ENST00000462787 ATXN8OSP0DMR3 200 aa15.69■□□□□ 0.1
SMC4-204ENST00000462787 RCVRNP35243 200 aa15.69■□□□□ 0.1
SMC4-204ENST00000462787 TGFBR2P37173 567 aa15.69■□□□□ 0.1
SMC4-204ENST00000462787 SLC25A11Q02978 314 aaKnown RBP15.69■□□□□ 0.1
SMC4-204ENST00000462787 SNAPC2Q13487 334 aa15.69■□□□□ 0.1
SMC4-204ENST00000462787 SMU1Q2TAY7 513 aa15.69■□□□□ 0.1
SMC4-204ENST00000462787 LYPLAL1Q5VWZ2 237 aa15.69■□□□□ 0.1
SMC4-204ENST00000462787 BORAQ6PGQ7 559 aa15.69■□□□□ 0.1
SMC4-204ENST00000462787 MACC1Q6ZN28 852 aa15.69■□□□□ 0.1
SMC4-204ENST00000462787 DDX53Q86TM3 631 aaKnown RBP15.69■□□□□ 0.1
SMC4-204ENST00000462787 LGI2Q8N0V4 545 aa15.69■□□□□ 0.1
SMC4-204ENST00000462787 FBXL18Q96ME1 805 aa15.69■□□□□ 0.1
SMC4-204ENST00000462787 CNTN3Q9P232 1028 aa15.69■□□□□ 0.1
SMC4-204ENST00000462787 GSAPA4D1B5 854 aa15.69■□□□□ 0.1
SMC4-204ENST00000462787 ARHGEF33A8MVX0 844 aa15.69■□□□□ 0.1
SMC4-204ENST00000462787 DPYSL4O14531 572 aa15.69■□□□□ 0.1
SMC4-204ENST00000462787 GRM5P41594 1212 aa15.69■□□□□ 0.1
SMC4-204ENST00000462787 NUMBP49757 651 aa15.69■□□□□ 0.1
SMC4-204ENST00000462787 GSK3BP49841 420 aa15.69■□□□□ 0.1
SMC4-204ENST00000462787 STARD3Q14849 445 aa15.69■□□□□ 0.1
SMC4-204ENST00000462787 CPSF6Q16630 551 aaKnown RBP eCLIP15.69■□□□□ 0.14e-6■■■□□ 15.6
SMC4-204ENST00000462787 PAN2Q504Q3 1202 aaKnown RBP15.69■□□□□ 0.1
SMC4-204ENST00000462787 ESRP1Q6NXG1 681 aaKnown RBP15.69■□□□□ 0.1
SMC4-204ENST00000462787 ASCC1Q8N9N2 400 aaKnown RBP15.69■□□□□ 0.1
SMC4-204ENST00000462787 SLC17A6Q9P2U8 582 aa15.69■□□□□ 0.1
SMC4-204ENST00000462787 FBXW4P57775 412 aa15.68■□□□□ 0.1
SMC4-204ENST00000462787 GALNT3Q14435 633 aa15.68■□□□□ 0.1
SMC4-204ENST00000462787 LIN54Q6MZP7 749 aa15.68■□□□□ 0.1
SMC4-204ENST00000462787 KBTBD6Q86V97 674 aa15.68■□□□□ 0.1
SMC4-204ENST00000462787 CCDC185Q8N715 623 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms