RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 TBC1D29Q9UFV1 150 aa10.06□□□□□ -0.8
SF3A3-204ENST00000462258 PISDQ9UG56 409 aa10.06□□□□□ -0.8
SF3A3-204ENST00000462258 AMFRQ9UKV5 643 aa10.06□□□□□ -0.8
SF3A3-204ENST00000462258 PACSIN2Q9UNF0 486 aaPredicted RBP10.06□□□□□ -0.8
SF3A3-204ENST00000462258 ADGRG1Q9Y653 693 aa10.06□□□□□ -0.8
SF3A3-204ENST00000462258 CAPN6Q9Y6Q1 641 aa10.06□□□□□ -0.8
SF3A3-204ENST00000462258 IGHV1OR21-1A0A087WYE8 117 aa10.05□□□□□ -0.8
SF3A3-204ENST00000462258 A6NCN8 305 aa10.05□□□□□ -0.8
SF3A3-204ENST00000462258 MIF4GDA9UHW6 222 aaKnown RBP10.05□□□□□ -0.8
SF3A3-204ENST00000462258 AGRPO00253 132 aa10.05□□□□□ -0.8
SF3A3-204ENST00000462258 PPM1DO15297 605 aa10.05□□□□□ -0.8
SF3A3-204ENST00000462258 KCNN4O15554 427 aa10.05□□□□□ -0.8
SF3A3-204ENST00000462258 KLK10O43240 276 aa10.05□□□□□ -0.8
SF3A3-204ENST00000462258 B4GAT1O43505 415 aa10.05□□□□□ -0.8
SF3A3-204ENST00000462258 SNX2O60749 519 aa10.05□□□□□ -0.8
SF3A3-204ENST00000462258 MTX2O75431 263 aa10.05□□□□□ -0.8
SF3A3-204ENST00000462258 ZNF189O75820 626 aaPredicted RBP10.05□□□□□ -0.8
SF3A3-204ENST00000462258 ANXA9O76027 345 aa10.05□□□□□ -0.8
SF3A3-204ENST00000462258 FTCDO95954 541 aa10.05□□□□□ -0.8
SF3A3-204ENST00000462258 PYGMP11217 842 aa10.05□□□□□ -0.8
SF3A3-204ENST00000462258 F3P13726 295 aa10.05□□□□□ -0.8
SF3A3-204ENST00000462258 SLC2A4P14672 509 aa10.05□□□□□ -0.8
SF3A3-204ENST00000462258 ITIH1P19827 911 aa10.05□□□□□ -0.8
SF3A3-204ENST00000462258 PSMB4P28070 264 aa10.05□□□□□ -0.8
SF3A3-204ENST00000462258 PPM1FP49593 454 aaPredicted RBP10.05□□□□□ -0.8
SF3A3-204ENST00000462258 GEMP55040 296 aa10.05□□□□□ -0.8
SF3A3-204ENST00000462258 TMPRSS3P57727 454 aa10.05□□□□□ -0.8
SF3A3-204ENST00000462258 HHEXQ03014 270 aa10.05□□□□□ -0.8
SF3A3-204ENST00000462258 ZFP36L1Q07352 338 aaKnown RBP10.05□□□□□ -0.8
SF3A3-204ENST00000462258 INSCQ1MX18 579 aa10.05□□□□□ -0.8
SF3A3-204ENST00000462258 ATP13A5Q4VNC0 1218 aa10.05□□□□□ -0.8
SF3A3-204ENST00000462258 BROXQ5VW32 411 aa10.05□□□□□ -0.8
SF3A3-204ENST00000462258 ADGRG6Q86SQ4 1221 aa10.05□□□□□ -0.8
SF3A3-204ENST00000462258 PIM3Q86V86 326 aa10.05□□□□□ -0.8
SF3A3-204ENST00000462258 LRRTM4Q86VH4 590 aa10.05□□□□□ -0.8
SF3A3-204ENST00000462258 ZNF761Q86XN6 746 aaPredicted RBP10.05□□□□□ -0.8
SF3A3-204ENST00000462258 JAMLQ86YT9 394 aa10.05□□□□□ -0.8
SF3A3-204ENST00000462258 TMEM159Q96B96 161 aa10.05□□□□□ -0.8
SF3A3-204ENST00000462258 CCDC97Q96F63 343 aaPredicted RBP10.05□□□□□ -0.8
SF3A3-204ENST00000462258 CCDC74BQ96LY2 380 aa10.05□□□□□ -0.8
SF3A3-204ENST00000462258 SPATA13Q96N96 652 aa10.05□□□□□ -0.8
SF3A3-204ENST00000462258 SLC38A3Q99624 504 aa10.05□□□□□ -0.8
SF3A3-204ENST00000462258 CMKLR1Q99788 373 aa10.05□□□□□ -0.8
SF3A3-204ENST00000462258 SEMA6CQ9H3T2 930 aa10.05□□□□□ -0.8
SF3A3-204ENST00000462258 OSGEPL1Q9H4B0 414 aa10.05□□□□□ -0.8
SF3A3-204ENST00000462258 PRORYQ9H606 182 aa10.05□□□□□ -0.8
SF3A3-204ENST00000462258 TRIM39Q9HCM9 518 aa10.05□□□□□ -0.8
SF3A3-204ENST00000462258 KCNK4Q9NYG8 393 aa10.05□□□□□ -0.8
SF3A3-204ENST00000462258 TRBV23OR9-2A0A075B6M9 112 aa10.04□□□□□ -0.8
SF3A3-204ENST00000462258 KIR2DS5A0A0G2JLQ3 304 aa10.04□□□□□ -0.8
SF3A3-204ENST00000462258 A0A0G2JNG1 304 aa10.04□□□□□ -0.8
SF3A3-204ENST00000462258 GLYATL1P3A0A0U1RQE8 302 aa10.04□□□□□ -0.8
SF3A3-204ENST00000462258 GOLGA6L9A6NEM1 432 aa10.04□□□□□ -0.8
SF3A3-204ENST00000462258 KIR2DS3K7RE56 304 aa10.04□□□□□ -0.8
SF3A3-204ENST00000462258 CHUKO15111 745 aa10.04□□□□□ -0.8
SF3A3-204ENST00000462258 DDX3YO15523 660 aaKnown RBP10.04□□□□□ -0.8
SF3A3-204ENST00000462258 GPR39O43194 453 aa10.04□□□□□ -0.8
SF3A3-204ENST00000462258 DUX1O43812 170 aa10.04□□□□□ -0.8
SF3A3-204ENST00000462258 VEGFDO43915 354 aa10.04□□□□□ -0.8
SF3A3-204ENST00000462258 THRAP10827 490 aa10.04□□□□□ -0.8
SF3A3-204ENST00000462258 CD1CP29017 333 aa10.04□□□□□ -0.8
SF3A3-204ENST00000462258 MAPK10P53779 464 aa10.04□□□□□ -0.8
SF3A3-204ENST00000462258 UCNP55089 124 aa10.04□□□□□ -0.8
SF3A3-204ENST00000462258 CXADRP78310 365 aa10.04□□□□□ -0.8
SF3A3-204ENST00000462258 GPLD1P80108 840 aa10.04□□□□□ -0.8
SF3A3-204ENST00000462258 GTF2H3Q13889 308 aa10.04□□□□□ -0.8
SF3A3-204ENST00000462258 PRPSAP1Q14558 356 aa10.04□□□□□ -0.8
SF3A3-204ENST00000462258 KIR2DS5Q14953 304 aa10.04□□□□□ -0.8
SF3A3-204ENST00000462258 C16orf72Q14CZ0 275 aa10.04□□□□□ -0.8
SF3A3-204ENST00000462258 KHDC1Q4VXA5 237 aaKnown RBP10.04□□□□□ -0.8
SF3A3-204ENST00000462258 ANKRD20A2Q5SQ80 823 aa10.04□□□□□ -0.8
SF3A3-204ENST00000462258 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.04□□□□□ -0.8
SF3A3-204ENST00000462258 ANKRD20A1Q5TYW2 823 aa10.04□□□□□ -0.8
SF3A3-204ENST00000462258 ANKRD20A3Q5VUR7 823 aa10.04□□□□□ -0.8
SF3A3-204ENST00000462258 NKAIN2Q5VXU1 208 aa10.04□□□□□ -0.8
SF3A3-204ENST00000462258 ZDHHC20Q5W0Z9 365 aa10.04□□□□□ -0.8
SF3A3-204ENST00000462258 DARS2Q6PI48 645 aaKnown RBP10.04□□□□□ -0.8
SF3A3-204ENST00000462258 FAM151BQ6UXP7 276 aa10.04□□□□□ -0.8
SF3A3-204ENST00000462258 SLC9B2Q86UD5 537 aa10.04□□□□□ -0.8
SF3A3-204ENST00000462258 TRAPPC5Q8IUR0 188 aa10.04□□□□□ -0.8
SF3A3-204ENST00000462258 RCBTB1Q8NDN9 531 aa10.04□□□□□ -0.8
SF3A3-204ENST00000462258 GDAP1Q8TB36 358 aa10.04□□□□□ -0.8
SF3A3-204ENST00000462258 CCDC110Q8TBZ0 833 aa10.04□□□□□ -0.8
SF3A3-204ENST00000462258 APOL2Q9BQE5 337 aa10.04□□□□□ -0.8
SF3A3-204ENST00000462258 TIMM29Q9BSF4 260 aa10.04□□□□□ -0.8
SF3A3-204ENST00000462258 DPH1Q9BZG8 443 aa10.04□□□□□ -0.8
SF3A3-204ENST00000462258 ZCCHC2Q9C0B9 1178 aaKnown RBP10.04□□□□□ -0.8
SF3A3-204ENST00000462258 SARS2Q9NP81 518 aaKnown RBP10.04□□□□□ -0.8
SF3A3-204ENST00000462258 KLC4Q9NSK0 619 aa10.04□□□□□ -0.8
SF3A3-204ENST00000462258 AKAP7Q9P0M2 348 aaPredicted RBP10.04□□□□□ -0.8
SF3A3-204ENST00000462258 IL17CQ9P0M4 197 aa10.04□□□□□ -0.8
SF3A3-204ENST00000462258 DNAJC16Q9Y2G8 782 aa10.04□□□□□ -0.8
SF3A3-204ENST00000462258 AAR2Q9Y312 384 aaKnown RBP10.04□□□□□ -0.8
SF3A3-204ENST00000462258 PKP3Q9Y446 797 aa10.04□□□□□ -0.8
SF3A3-204ENST00000462258 PCDHGA7Q9Y5G6 932 aa10.04□□□□□ -0.8
SF3A3-204ENST00000462258 IGHV5-10-1A0A0J9YXX1 117 aa10.03□□□□□ -0.8
SF3A3-204ENST00000462258 PDZK1P1A8MUH7 402 aa10.03□□□□□ -0.8
SF3A3-204ENST00000462258 HGSO14964 777 aaPredicted RBP10.03□□□□□ -0.8
SF3A3-204ENST00000462258 KMOO15229 486 aa10.03□□□□□ -0.8
SF3A3-204ENST00000462258 BUD23O43709 281 aaKnown RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms