RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 CCDC117Q8IWD4 279 aaPredicted RBP6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 FAM217AQ8IXS0 508 aa6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 CFAP52Q8N1V2 620 aa6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 CCDC185Q8N715 623 aa6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 ZBTB8BQ8NAP8 495 aaPredicted RBP6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 HJURPQ8NCD3 748 aaPredicted RBP6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 OR2T34Q8NGX1 318 aa6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 IFI44Q8TCB0 444 aa6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 BCAS4Q8TDM0 211 aa6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 MAIP1Q8WWC4 291 aa6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 KISS1RQ969F8 398 aaPredicted RBP6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 ARRDC3Q96B67 414 aa6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 ZNF837Q96EG3 531 aaPredicted RBP6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 MOCOSQ96EN8 888 aa6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 C1orf74Q96LT6 269 aa6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 RPRD1AQ96P16 312 aaPredicted RBP6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 HAPLN3Q96S86 360 aa6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 CCDC28BQ9BUN5 200 aa6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 RAB6CQ9H0N0 254 aa6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 NEUROG2Q9H2A3 272 aa6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 TMEM245Q9H330 911 aa6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 SLC40A1Q9NP59 571 aa6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 PRSS16Q9NQE7 514 aa6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 SEPT10Q9P0V9 454 aa6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 PCSK1NQ9UHG2 260 aa6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 XPO7Q9UIA9 1087 aaKnown RBP6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 TUBD1Q9UJT1 453 aa6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 VANGL2Q9ULK5 521 aa6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 CLEC4EQ9ULY5 219 aa6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 RABL2BQ9UNT1 228 aa6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 TFR2Q9UP52 801 aa6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 PLA2G4CQ9UP65 541 aa6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 ITM2BQ9Y287 266 aa6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 C15orf41Q9Y2V0 281 aa6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 PCDHGA7Q9Y5G6 932 aa6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 HS3ST4Q9Y661 456 aa6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 ANKRD36A6QL64 1941 aa6.01□□□□□ -1.45
SMARCC1-204ENST00000462198 CCDC187A0A096LP49 1063 aa6□□□□□ -1.45
SMARCC1-204ENST00000462198 A0A0A6YYK5 440 aaPredicted RBP6□□□□□ -1.45
SMARCC1-204ENST00000462198 LY6G6EA0A0G2JKS1 128 aa6□□□□□ -1.45
SMARCC1-204ENST00000462198 MACROD2A1Z1Q3 448 aa6□□□□□ -1.45
SMARCC1-204ENST00000462198 CPED1A4D0V7 1026 aa6□□□□□ -1.45
SMARCC1-204ENST00000462198 WIPF3A6NGB9 483 aa6□□□□□ -1.45
SMARCC1-204ENST00000462198 ANKRD65E5RJM6 399 aa6□□□□□ -1.45
SMARCC1-204ENST00000462198 J3QW42 95 aa6□□□□□ -1.45
SMARCC1-204ENST00000462198 TTI1O43156 1089 aa6□□□□□ -1.45
SMARCC1-204ENST00000462198 BUB1O43683 1085 aa6□□□□□ -1.45
SMARCC1-204ENST00000462198 BNIP3LO60238 219 aa6□□□□□ -1.45
SMARCC1-204ENST00000462198 SUSD5O60279 629 aa6□□□□□ -1.45
SMARCC1-204ENST00000462198 VPS4BO75351 444 aa6□□□□□ -1.45
SMARCC1-204ENST00000462198 LRCH4O75427 683 aa6□□□□□ -1.45
SMARCC1-204ENST00000462198 MTA2O94776 668 aa6□□□□□ -1.45
SMARCC1-204ENST00000462198 PROSCO94903 275 aa6□□□□□ -1.45
SMARCC1-204ENST00000462198 ATP1A1P05023 1023 aaKnown RBP6□□□□□ -1.45
SMARCC1-204ENST00000462198 GSTA2P09210 222 aa6□□□□□ -1.45
SMARCC1-204ENST00000462198 GIMD1P0DJR0 217 aa6□□□□□ -1.45
SMARCC1-204ENST00000462198 LIPCP11150 499 aa6□□□□□ -1.45
SMARCC1-204ENST00000462198 GNLYP22749 145 aa6□□□□□ -1.45
SMARCC1-204ENST00000462198 MAN1A1P33908 653 aa6□□□□□ -1.45
SMARCC1-204ENST00000462198 PCK1P35558 622 aa6□□□□□ -1.45
SMARCC1-204ENST00000462198 UQCRFS1P47985 274 aa6□□□□□ -1.45
SMARCC1-204ENST00000462198 CCR5P51681 352 aa6□□□□□ -1.45
SMARCC1-204ENST00000462198 EPHB1P54762 984 aa6□□□□□ -1.45
SMARCC1-204ENST00000462198 MLLT10P55197 1068 aa6□□□□□ -1.45
SMARCC1-204ENST00000462198 RPS24P62847 133 aaKnown RBP6□□□□□ -1.45
SMARCC1-204ENST00000462198 SNRPNP63162 240 aaKnown RBP6□□□□□ -1.45
SMARCC1-204ENST00000462198 TUBA4AP68366 448 aa6□□□□□ -1.45
SMARCC1-204ENST00000462198 CDH18Q13634 790 aa6□□□□□ -1.45
SMARCC1-204ENST00000462198 EIF4HQ15056 248 aaKnown RBP6□□□□□ -1.45
SMARCC1-204ENST00000462198 IFI16Q16666 785 aaKnown RBP6□□□□□ -1.45
SMARCC1-204ENST00000462198 FNDC3BQ53EP0 1204 aaKnown RBP6□□□□□ -1.45
SMARCC1-204ENST00000462198 PPP6R3Q5H9R7 873 aaPredicted RBP6□□□□□ -1.45
SMARCC1-204ENST00000462198 RABGAP1LQ5R372 815 aa6□□□□□ -1.45
SMARCC1-204ENST00000462198 MPP7Q5T2T1 576 aa6□□□□□ -1.45
SMARCC1-204ENST00000462198 ERMARDQ5T6L9 678 aa6□□□□□ -1.45
SMARCC1-204ENST00000462198 THEMIS2Q5TEJ8 643 aa6□□□□□ -1.45
SMARCC1-204ENST00000462198 FYB2Q5VWT5 728 aa6□□□□□ -1.45
SMARCC1-204ENST00000462198 FAAH2Q6GMR7 532 aa6□□□□□ -1.45
SMARCC1-204ENST00000462198 NAPEPLDQ6IQ20 393 aa6□□□□□ -1.45
SMARCC1-204ENST00000462198 RWDD4Q6NW29 188 aaKnown RBP6□□□□□ -1.45
SMARCC1-204ENST00000462198 FBXL22Q6P050 247 aa6□□□□□ -1.45
SMARCC1-204ENST00000462198 VHLLQ6RSH7 139 aa6□□□□□ -1.45
SMARCC1-204ENST00000462198 RBM44Q6ZP01 1051 aaKnown RBP6□□□□□ -1.45
SMARCC1-204ENST00000462198 ANKS1BQ7Z6G8 1248 aa6□□□□□ -1.45
SMARCC1-204ENST00000462198 LMNTD2Q8IXW0 634 aa6□□□□□ -1.45
SMARCC1-204ENST00000462198 CCDC13Q8IYE1 715 aa6□□□□□ -1.45
SMARCC1-204ENST00000462198 CARNMT1Q8N4J0 409 aa6□□□□□ -1.45
SMARCC1-204ENST00000462198 AFAP1L2Q8N4X5 818 aa6□□□□□ -1.45
SMARCC1-204ENST00000462198 NIPA2Q8N8Q9 360 aa6□□□□□ -1.45
SMARCC1-204ENST00000462198 CFAP61Q8NHU2 1237 aa6□□□□□ -1.45
SMARCC1-204ENST00000462198 CYB5D2Q8WUJ1 264 aa6□□□□□ -1.45
SMARCC1-204ENST00000462198 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6□□□□□ -1.45
SMARCC1-204ENST00000462198 HSPH1Q92598 858 aa6□□□□□ -1.45
SMARCC1-204ENST00000462198 SLC35B4Q969S0 331 aa6□□□□□ -1.45
SMARCC1-204ENST00000462198 GFM2Q969S9 779 aaKnown RBP6□□□□□ -1.45
SMARCC1-204ENST00000462198 NTAN1Q96AB6 310 aa6□□□□□ -1.45
SMARCC1-204ENST00000462198 NACC2Q96BF6 587 aa6□□□□□ -1.45
SMARCC1-204ENST00000462198 PRICKLE1Q96MT3 831 aaPredicted RBP6□□□□□ -1.45
SMARCC1-204ENST00000462198 PRMT1Q99873 361 aaKnown RBP6□□□□□ -1.45
SMARCC1-204ENST00000462198 FAM192AQ9GZU8 254 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms