RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 PRSS42Q7Z5A4 293 aa10.7□□□□□ -0.7
CBX3-205ENST00000462165 IRF2BP2Q7Z5L9 587 aa10.7□□□□□ -0.7
CBX3-205ENST00000462165 LRRC49Q8IUZ0 686 aa10.7□□□□□ -0.7
CBX3-205ENST00000462165 AOPEPQ8N6M6 819 aa10.7□□□□□ -0.7
CBX3-205ENST00000462165 CT55Q8WUE5 264 aa10.7□□□□□ -0.7
CBX3-205ENST00000462165 SEC14L1Q92503 715 aa10.7□□□□□ -0.7
CBX3-205ENST00000462165 TGM7Q96PF1 710 aa10.7□□□□□ -0.7
CBX3-205ENST00000462165 CSPG4P5Q96PW8 444 aa10.7□□□□□ -0.7
CBX3-205ENST00000462165 ERGIC2Q96RQ1 377 aa10.7□□□□□ -0.7
CBX3-205ENST00000462165 TDRD1Q9BXT4 1180 aaKnown RBP10.7□□□□□ -0.7
CBX3-205ENST00000462165 POLR1EQ9GZS1 481 aaKnown RBP10.7□□□□□ -0.7
CBX3-205ENST00000462165 NUP62CLQ9H1M0 184 aa10.7□□□□□ -0.7
CBX3-205ENST00000462165 MLXIPLQ9NP71 852 aa10.7□□□□□ -0.7
CBX3-205ENST00000462165 SCHIP1Q9P0W5 487 aaPredicted RBP10.7□□□□□ -0.7
CBX3-205ENST00000462165 LNPEPQ9UIQ6 1025 aa10.7□□□□□ -0.7
CBX3-205ENST00000462165 PCDHGA9Q9Y5G4 932 aaKnown RBP10.7□□□□□ -0.7
CBX3-205ENST00000462165 ADGRG1Q9Y653 693 aa10.7□□□□□ -0.7
CBX3-205ENST00000462165 SLC30A1Q9Y6M5 507 aa10.7□□□□□ -0.7
CBX3-205ENST00000462165 HIVEP3Q5T1R4 2406 aa10.69□□□□□ -0.7
CBX3-205ENST00000462165 RGSL1A5PLK6 1076 aa10.69□□□□□ -0.7
CBX3-205ENST00000462165 GPR89AB7ZAQ6 455 aa10.69□□□□□ -0.7
CBX3-205ENST00000462165 RASSF9O75901 435 aa10.69□□□□□ -0.7
CBX3-205ENST00000462165 SORBS2O94875 1100 aaKnown RBP10.69□□□□□ -0.7
CBX3-205ENST00000462165 DDAH2O95865 285 aa10.69□□□□□ -0.7
CBX3-205ENST00000462165 VIPP01282 170 aa10.69□□□□□ -0.7
CBX3-205ENST00000462165 GPR89BP0CG08 455 aa10.69□□□□□ -0.7
CBX3-205ENST00000462165 CES1P23141 567 aa10.69□□□□□ -0.7
CBX3-205ENST00000462165 CASP14P31944 242 aa10.69□□□□□ -0.7
CBX3-205ENST00000462165 SLC19A1P41440 591 aa10.69□□□□□ -0.7
CBX3-205ENST00000462165 LEPRP48357 1165 aaKnown RBP10.69□□□□□ -0.7
CBX3-205ENST00000462165 RPL26P61254 145 aaKnown RBP10.69□□□□□ -0.7
CBX3-205ENST00000462165 UBXN1Q04323 297 aa10.69□□□□□ -0.7
CBX3-205ENST00000462165 ITKQ08881 620 aa10.69□□□□□ -0.7
CBX3-205ENST00000462165 NADK2Q4G0N4 442 aa10.69□□□□□ -0.7
CBX3-205ENST00000462165 CYB5D1Q6P9G0 228 aa10.69□□□□□ -0.7
CBX3-205ENST00000462165 PPP1R3BQ86XI6 285 aa10.69□□□□□ -0.7
CBX3-205ENST00000462165 THAP4Q8WY91 577 aa10.69□□□□□ -0.7
CBX3-205ENST00000462165 KLHL6Q8WZ60 621 aa10.69□□□□□ -0.7
CBX3-205ENST00000462165 MAML1Q92585 1016 aa10.69□□□□□ -0.7
CBX3-205ENST00000462165 HSPH1Q92598 858 aa10.69□□□□□ -0.7
CBX3-205ENST00000462165 ELMO2Q96JJ3 720 aa10.69□□□□□ -0.7
CBX3-205ENST00000462165 BRD8Q9H0E9 1235 aa10.69□□□□□ -0.7
CBX3-205ENST00000462165 FAM83DQ9H4H8 585 aa10.69□□□□□ -0.7
CBX3-205ENST00000462165 ACTL8Q9H568 366 aa10.69□□□□□ -0.7
CBX3-205ENST00000462165 KLC4Q9NSK0 619 aa10.69□□□□□ -0.7
CBX3-205ENST00000462165 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.69□□□□□ -0.7
CBX3-205ENST00000462165 FANCLQ9NW38 375 aa10.69□□□□□ -0.7
CBX3-205ENST00000462165 PKD2L2Q9NZM6 624 aa10.69□□□□□ -0.7
CBX3-205ENST00000462165 ZNF624Q9P2J8 865 aaPredicted RBP10.69□□□□□ -0.7
CBX3-205ENST00000462165 RCOR3Q9P2K3 495 aaPredicted RBP10.69□□□□□ -0.7
CBX3-205ENST00000462165 ATXN10Q9UBB4 475 aa10.69□□□□□ -0.7
CBX3-205ENST00000462165 LIMA1Q9UHB6 759 aaKnown RBP10.69□□□□□ -0.7
CBX3-205ENST00000462165 RPL26L1Q9UNX3 145 aaKnown RBP10.69□□□□□ -0.7
CBX3-205ENST00000462165 CHKBQ9Y259 395 aa10.69□□□□□ -0.7
CBX3-205ENST00000462165 SCINQ9Y6U3 715 aa10.69□□□□□ -0.7
CBX3-205ENST00000462165 C1orf232A0A0U1RR37 186 aa10.68□□□□□ -0.7
CBX3-205ENST00000462165 KIF1CO43896 1103 aaKnown RBP10.68□□□□□ -0.7
CBX3-205ENST00000462165 TIAF1O95411 115 aa10.68□□□□□ -0.7
CBX3-205ENST00000462165 GZMAP12544 262 aa10.68□□□□□ -0.7
CBX3-205ENST00000462165 TCF4P15884 667 aa10.68□□□□□ -0.7
CBX3-205ENST00000462165 ZNF8P17098 575 aaPredicted RBP10.68□□□□□ -0.7
CBX3-205ENST00000462165 NELFEP18615 380 aaKnown RBP10.68□□□□□ -0.7
CBX3-205ENST00000462165 CA4P22748 312 aa10.68□□□□□ -0.7
CBX3-205ENST00000462165 CAPZBP47756 277 aa10.68□□□□□ -0.7
CBX3-205ENST00000462165 PGDP52209 483 aa10.68□□□□□ -0.7
CBX3-205ENST00000462165 DSC2Q02487 901 aa10.68□□□□□ -0.7
CBX3-205ENST00000462165 UGT8Q16880 541 aa10.68□□□□□ -0.7
CBX3-205ENST00000462165 ANKRD20A8PQ5CZ79 823 aa10.68□□□□□ -0.7
CBX3-205ENST00000462165 CACHD1Q5VU97 1274 aa10.68□□□□□ -0.7
CBX3-205ENST00000462165 PAPD7Q5XG87 772 aaKnown RBP10.68□□□□□ -0.7
CBX3-205ENST00000462165 TRIM48Q8IWZ4 208 aa10.68□□□□□ -0.7
CBX3-205ENST00000462165 LPCAT1Q8NF37 534 aa10.68□□□□□ -0.7
CBX3-205ENST00000462165 ANKRD20A12PQ8NF67 263 aa10.68□□□□□ -0.7
CBX3-205ENST00000462165 CCHCR1Q8TD31 782 aa10.68□□□□□ -0.7
CBX3-205ENST00000462165 TEKT4Q8WW24 435 aa10.68□□□□□ -0.7
CBX3-205ENST00000462165 RSC1A1Q92681 617 aa10.68□□□□□ -0.7
CBX3-205ENST00000462165 FCRL4Q96PJ5 515 aa10.68□□□□□ -0.7
CBX3-205ENST00000462165 SLC25A23Q9BV35 468 aa10.68□□□□□ -0.7
CBX3-205ENST00000462165 GPR87Q9BY21 358 aa10.68□□□□□ -0.7
CBX3-205ENST00000462165 RAB33BQ9H082 229 aa10.68□□□□□ -0.7
CBX3-205ENST00000462165 OSGEPL1Q9H4B0 414 aa10.68□□□□□ -0.7
CBX3-205ENST00000462165 PCDH9Q9HC56 1237 aa10.68□□□□□ -0.7
CBX3-205ENST00000462165 PCDH18Q9HCL0 1135 aa10.68□□□□□ -0.7
CBX3-205ENST00000462165 TRIM39Q9HCM9 518 aa10.68□□□□□ -0.7
CBX3-205ENST00000462165 POT1Q9NUX5 634 aa10.68□□□□□ -0.7
CBX3-205ENST00000462165 SEMA5BQ9P283 1151 aa10.68□□□□□ -0.7
CBX3-205ENST00000462165 EPHA6Q9UF33 1036 aa10.68□□□□□ -0.7
CBX3-205ENST00000462165 AMACRQ9UHK6 382 aa10.68□□□□□ -0.7
CBX3-205ENST00000462165 MYO6Q9UM54 1294 aa10.68□□□□□ -0.7
CBX3-205ENST00000462165 PCDHGB7Q9Y5F8 929 aa10.68□□□□□ -0.7
CBX3-205ENST00000462165 TEP1Q99973 2627 aaKnown RBP10.67□□□□□ -0.7
CBX3-205ENST00000462165 A1L4Q6 167 aa10.67□□□□□ -0.7
CBX3-205ENST00000462165 LRRC10BA6NIK2 292 aa10.67□□□□□ -0.7
CBX3-205ENST00000462165 CHUKO15111 745 aa10.67□□□□□ -0.7
CBX3-205ENST00000462165 MATN3O15232 486 aa10.67□□□□□ -0.7
CBX3-205ENST00000462165 MTA2O94776 668 aa10.67□□□□□ -0.7
CBX3-205ENST00000462165 FTLP02792 175 aaPredicted RBP10.67□□□□□ -0.7
CBX3-205ENST00000462165 RARAP10276 462 aa10.67□□□□□ -0.7
CBX3-205ENST00000462165 PTPN4P29074 926 aa10.67□□□□□ -0.7
CBX3-205ENST00000462165 ZNF165P49910 485 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms