RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 XRCC4Q13426 336 aa9.05□□□□□ -0.96
BRCA1-207ENST00000461798 KIR2DS5Q14953 304 aa9.05□□□□□ -0.96
BRCA1-207ENST00000461798 TGIF1Q15583 401 aa9.05□□□□□ -0.96
BRCA1-207ENST00000461798 PPP2R5EQ16537 467 aa9.05□□□□□ -0.96
BRCA1-207ENST00000461798 ZNF569Q5MCW4 686 aa9.05□□□□□ -0.96
BRCA1-207ENST00000461798 FAM182AQ5T1J6 154 aa9.05□□□□□ -0.96
BRCA1-207ENST00000461798 NKAIN2Q5VXU1 208 aa9.05□□□□□ -0.96
BRCA1-207ENST00000461798 C11orf63Q6NUN7 778 aa9.05□□□□□ -0.96
BRCA1-207ENST00000461798 WDR74Q6RFH5 385 aaPredicted RBP9.05□□□□□ -0.96
BRCA1-207ENST00000461798 XKR5Q6UX68 686 aa9.05□□□□□ -0.96
BRCA1-207ENST00000461798 BBS12Q6ZW61 710 aa9.05□□□□□ -0.96
BRCA1-207ENST00000461798 CHST15Q7LFX5 561 aaPredicted RBP9.05□□□□□ -0.96
BRCA1-207ENST00000461798 ARHGAP22Q7Z5H3 698 aa9.05□□□□□ -0.96
BRCA1-207ENST00000461798 ADGRG6Q86SQ4 1221 aa9.05□□□□□ -0.96
BRCA1-207ENST00000461798 ZNF843Q8N446 348 aa9.05□□□□□ -0.96
BRCA1-207ENST00000461798 AVL9Q8NBF6 648 aa9.05□□□□□ -0.96
BRCA1-207ENST00000461798 AGBL5Q8NDL9 886 aa9.05□□□□□ -0.96
BRCA1-207ENST00000461798 P3H4Q92791 437 aa9.05□□□□□ -0.96
BRCA1-207ENST00000461798 GLYATL1Q969I3 302 aa9.05□□□□□ -0.96
BRCA1-207ENST00000461798 CCDC74BQ96LY2 380 aa9.05□□□□□ -0.96
BRCA1-207ENST00000461798 PLEKHG4BQ96PX9 1271 aa9.05□□□□□ -0.96
BRCA1-207ENST00000461798 VPS35Q96QK1 796 aa9.05□□□□□ -0.96
BRCA1-207ENST00000461798 TAAR9Q96RI9 348 aa9.05□□□□□ -0.96
BRCA1-207ENST00000461798 SLC38A3Q99624 504 aa9.05□□□□□ -0.96
BRCA1-207ENST00000461798 SPATA16Q9BXB7 569 aa9.05□□□□□ -0.96
BRCA1-207ENST00000461798 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.05□□□□□ -0.96
BRCA1-207ENST00000461798 GPR63Q9BZJ6 419 aa9.05□□□□□ -0.96
BRCA1-207ENST00000461798 EPB41L1Q9H4G0 881 aa9.05□□□□□ -0.96
BRCA1-207ENST00000461798 UCK1Q9HA47 277 aa9.05□□□□□ -0.96
BRCA1-207ENST00000461798 LUC7LQ9NQ29 371 aaKnown RBP9.05□□□□□ -0.96
BRCA1-207ENST00000461798 FOXJ2Q9P0K8 574 aa9.05□□□□□ -0.96
BRCA1-207ENST00000461798 SEPT10Q9P0V9 454 aa9.05□□□□□ -0.96
BRCA1-207ENST00000461798 FAM153AQ9UHL3 310 aa9.05□□□□□ -0.96
BRCA1-207ENST00000461798 SHOC2Q9UQ13 582 aa9.05□□□□□ -0.96
BRCA1-207ENST00000461798 EFR3BQ9Y2G0 817 aa9.05□□□□□ -0.96
BRCA1-207ENST00000461798 PRKAB1Q9Y478 270 aa9.05□□□□□ -0.96
BRCA1-207ENST00000461798 SPO11Q9Y5K1 396 aa9.05□□□□□ -0.96
BRCA1-207ENST00000461798 SMG1Q96Q15 3661 aaKnown RBP9.05□□□□□ -0.96
BRCA1-207ENST00000461798 MGAQ8IWI9 3026 aa9.04□□□□□ -0.96
BRCA1-207ENST00000461798 TRBV23OR9-2A0A075B6M9 112 aa9.04□□□□□ -0.96
BRCA1-207ENST00000461798 AURKAO14965 403 aa9.04□□□□□ -0.96
BRCA1-207ENST00000461798 KCNJ13O60928 360 aa9.04□□□□□ -0.96
BRCA1-207ENST00000461798 PMPCBO75439 489 aa9.04□□□□□ -0.96
BRCA1-207ENST00000461798 PRB1P04280 392 aa9.04□□□□□ -0.96
BRCA1-207ENST00000461798 PIRTP0C851 137 aa9.04□□□□□ -0.96
BRCA1-207ENST00000461798 ACP5P13686 325 aa9.04□□□□□ -0.96
BRCA1-207ENST00000461798 TNNT1P13805 278 aa9.04□□□□□ -0.96
BRCA1-207ENST00000461798 XRCC1P18887 633 aaPredicted RBP9.04□□□□□ -0.96
BRCA1-207ENST00000461798 NFKB1P19838 968 aa9.04□□□□□ -0.96
BRCA1-207ENST00000461798 CSF2RBP32927 897 aa9.04□□□□□ -0.96
BRCA1-207ENST00000461798 CSTF2P33240 577 aaKnown RBP eCLIP9.04□□□□□ -0.96
BRCA1-207ENST00000461798 CYLC1P35663 651 aaPredicted RBP9.04□□□□□ -0.96
BRCA1-207ENST00000461798 ARSDP51689 593 aa9.04□□□□□ -0.96
BRCA1-207ENST00000461798 MAPK10P53779 464 aa9.04□□□□□ -0.96
BRCA1-207ENST00000461798 WNT3AP56704 352 aa9.04□□□□□ -0.96
BRCA1-207ENST00000461798 COPS2P61201 443 aa9.04□□□□□ -0.96
BRCA1-207ENST00000461798 UBE2IP63279 158 aaKnown RBP9.04□□□□□ -0.96
BRCA1-207ENST00000461798 HHEXQ03014 270 aa9.04□□□□□ -0.96
BRCA1-207ENST00000461798 SPA17Q15506 151 aa9.04□□□□□ -0.96
BRCA1-207ENST00000461798 PCSK7Q16549 785 aa9.04□□□□□ -0.96
BRCA1-207ENST00000461798 TAF1BQ53T94 588 aaPredicted RBP9.04□□□□□ -0.96
BRCA1-207ENST00000461798 ZDHHC20Q5W0Z9 365 aa9.04□□□□□ -0.96
BRCA1-207ENST00000461798 ABRAXAS1Q6UWZ7 409 aa9.04□□□□□ -0.96
BRCA1-207ENST00000461798 WASH2PQ6VEQ5 465 aa9.04□□□□□ -0.96
BRCA1-207ENST00000461798 B4GALNT4Q76KP1 1039 aa9.04□□□□□ -0.96
BRCA1-207ENST00000461798 KDELC2Q7Z4H8 507 aa9.04□□□□□ -0.96
BRCA1-207ENST00000461798 SLC9B2Q86UD5 537 aa9.04□□□□□ -0.96
BRCA1-207ENST00000461798 ZFAND4Q86XD8 727 aa9.04□□□□□ -0.96
BRCA1-207ENST00000461798 TMTC1Q8IUR5 882 aa9.04□□□□□ -0.96
BRCA1-207ENST00000461798 ZNF567Q8N184 647 aa9.04□□□□□ -0.96
BRCA1-207ENST00000461798 TTC30BQ8N4P2 665 aa9.04□□□□□ -0.96
BRCA1-207ENST00000461798 RCBTB1Q8NDN9 531 aa9.04□□□□□ -0.96
BRCA1-207ENST00000461798 CCDC112Q8NEF3 446 aa9.04□□□□□ -0.96
BRCA1-207ENST00000461798 OR10G6Q8NH81 332 aa9.04□□□□□ -0.96
BRCA1-207ENST00000461798 HTR3CQ8WXA8 447 aa9.04□□□□□ -0.96
BRCA1-207ENST00000461798 MRFAP1L1Q96HT8 127 aa9.04□□□□□ -0.96
BRCA1-207ENST00000461798 RBM41Q96IZ5 413 aaKnown RBP9.04□□□□□ -0.96
BRCA1-207ENST00000461798 MRGPRX2Q96LB1 330 aa9.04□□□□□ -0.96
BRCA1-207ENST00000461798 QKIQ96PU8 341 aaKnown RBP eCLIP9.04□□□□□ -0.96
BRCA1-207ENST00000461798 PANX2Q96RD6 677 aa9.04□□□□□ -0.96
BRCA1-207ENST00000461798 TIMM29Q9BSF4 260 aa9.04□□□□□ -0.96
BRCA1-207ENST00000461798 DDA1Q9BW61 102 aa9.04□□□□□ -0.96
BRCA1-207ENST00000461798 ASPSCR1Q9BZE9 553 aa9.04□□□□□ -0.96
BRCA1-207ENST00000461798 SPRY4Q9C004 299 aa9.04□□□□□ -0.96
BRCA1-207ENST00000461798 OR2AG1Q9H205 316 aa9.04□□□□□ -0.96
BRCA1-207ENST00000461798 STN1Q9H668 368 aaKnown RBP9.04□□□□□ -0.96
BRCA1-207ENST00000461798 WASH6PQ9NQA3 447 aa9.04□□□□□ -0.96
BRCA1-207ENST00000461798 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.04□□□□□ -0.96
BRCA1-207ENST00000461798 HACD3Q9P035 362 aa9.04□□□□□ -0.96
BRCA1-207ENST00000461798 SLC23A2Q9UGH3 650 aa9.04□□□□□ -0.96
BRCA1-207ENST00000461798 TRHDEQ9UKU6 1024 aa9.04□□□□□ -0.96
BRCA1-207ENST00000461798 TMPRSS11EQ9UL52 423 aa9.04□□□□□ -0.96
BRCA1-207ENST00000461798 KCNK6Q9Y257 313 aa9.04□□□□□ -0.96
BRCA1-207ENST00000461798 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.04□□□□□ -0.96
BRCA1-207ENST00000461798 PCDHB11Q9Y5F2 797 aa9.04□□□□□ -0.96
BRCA1-207ENST00000461798 PCDHA3Q9Y5H8 950 aa9.04□□□□□ -0.96
BRCA1-207ENST00000461798 EPN1Q9Y6I3 576 aaPredicted RBP9.04□□□□□ -0.96
BRCA1-207ENST00000461798 LOC400499M0QZD8 3231 aa9.04□□□□□ -0.96
BRCA1-207ENST00000461798 LILRA5A6NI73 299 aa9.03□□□□□ -0.96
BRCA1-207ENST00000461798 BTNL10A8MVZ5 291 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms