RNA–Protein interactions for RNA: ENST00000461522.1

UBA3-204, Transcript of ubiquitin like modifier activating enzyme 3, human

TSL 2

Gene UBA3, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA3-204	ENST00000461522	SLC12A1	Q13621	1099 aa		4.15	□□□□□ -1.75
UBA3-204	ENST00000461522	TWISTNB	Q3B726	338 aa	Predicted RBP	4.15	□□□□□ -1.75
UBA3-204	ENST00000461522	CEP85L	Q5SZL2	805 aa		4.15	□□□□□ -1.75
UBA3-204	ENST00000461522	TRMT1L	Q7Z2T5	733 aa	Known RBP	4.15	□□□□□ -1.75
UBA3-204	ENST00000461522	GPAT4	Q86UL3	456 aa		4.15	□□□□□ -1.75
UBA3-204	ENST00000461522	SPATA5	Q8NB90	893 aa		4.15	□□□□□ -1.75
UBA3-204	ENST00000461522	MYRIP	Q8NFW9	859 aa		4.15	□□□□□ -1.75
UBA3-204	ENST00000461522	WBP2	Q969T9	261 aa		4.15	□□□□□ -1.75
UBA3-204	ENST00000461522	FBXL8	Q96CD0	374 aa		4.15	□□□□□ -1.75
UBA3-204	ENST00000461522	ERP27	Q96DN0	273 aa		4.15	□□□□□ -1.75
UBA3-204	ENST00000461522	ELP4	Q96EB1	424 aa		4.15	□□□□□ -1.75
UBA3-204	ENST00000461522	NUF2	Q9BZD4	464 aa		4.15	□□□□□ -1.75
UBA3-204	ENST00000461522	PCDH9	Q9HC56	1237 aa		4.15	□□□□□ -1.75
UBA3-204	ENST00000461522	CNGB3	Q9NQW8	809 aa		4.15	□□□□□ -1.75
UBA3-204	ENST00000461522	MCM9	Q9NXL9	1143 aa		4.15	□□□□□ -1.75
UBA3-204	ENST00000461522	IL1RAPL1	Q9NZN1	696 aa		4.15	□□□□□ -1.75
UBA3-204	ENST00000461522	ZNF69	Q9UC07	566 aa		4.15	□□□□□ -1.75
UBA3-204	ENST00000461522	TINAG	Q9UJW2	476 aa		4.15	□□□□□ -1.75
UBA3-204	ENST00000461522	ODF2L	Q9ULJ1	636 aa		4.15	□□□□□ -1.75
UBA3-204	ENST00000461522	PCDHGB3	Q9Y5G1	929 aa		4.15	□□□□□ -1.75
UBA3-204	ENST00000461522	USP16	Q9Y5T5	823 aa		4.15	□□□□□ -1.75
UBA3-204	ENST00000461522	FANCI	Q9NVI1	1328 aa		4.15	□□□□□ -1.75
UBA3-204	ENST00000461522	RGPD5	Q99666	1765 aa		4.14	□□□□□ -1.75
UBA3-204	ENST00000461522	TAF1	P21675	1872 aa		4.14	□□□□□ -1.75
UBA3-204	ENST00000461522		A0A1W2PS18	150 aa		4.14	□□□□□ -1.75
UBA3-204	ENST00000461522	TEX22	C9J3V5	150 aa		4.14	□□□□□ -1.75
UBA3-204	ENST00000461522	IPO8	O15397	1037 aa	Known RBP	4.14	□□□□□ -1.75
UBA3-204	ENST00000461522	FGF17	O60258	216 aa		4.14	□□□□□ -1.75
UBA3-204	ENST00000461522	NBN	O60934	754 aa		4.14	□□□□□ -1.75
UBA3-204	ENST00000461522	TCEA3	O75764	348 aa		4.14	□□□□□ -1.75
UBA3-204	ENST00000461522	RNASEH2A	O75792	299 aa	Known RBP	4.14	□□□□□ -1.75
UBA3-204	ENST00000461522	HEXA	P06865	529 aa		4.14	□□□□□ -1.75
UBA3-204	ENST00000461522	MMP2	P08253	660 aa		4.14	□□□□□ -1.75
UBA3-204	ENST00000461522	CFC1B	P0CG36	223 aa		4.14	□□□□□ -1.75
UBA3-204	ENST00000461522	CFC1	P0CG37	223 aa		4.14	□□□□□ -1.75
UBA3-204	ENST00000461522	HLA-DOB	P13765	273 aa		4.14	□□□□□ -1.75
UBA3-204	ENST00000461522	RRM1	P23921	792 aa		4.14	□□□□□ -1.75
UBA3-204	ENST00000461522	MARK3	P27448	753 aa		4.14	□□□□□ -1.75
UBA3-204	ENST00000461522	ANP32A	P39687	249 aa	Known RBP	4.14	□□□□□ -1.75
UBA3-204	ENST00000461522	CRKL	P46109	303 aa	Known RBP	4.14	□□□□□ -1.75
UBA3-204	ENST00000461522	SEC61B	P60468	96 aa	Known RBP	4.14	□□□□□ -1.75
UBA3-204	ENST00000461522	REL	Q04864	619 aa	Predicted RBP	4.14	□□□□□ -1.75
UBA3-204	ENST00000461522	GRIK3	Q13003	919 aa		4.14	□□□□□ -1.75
UBA3-204	ENST00000461522	ITPK1	Q13572	414 aa		4.14	□□□□□ -1.75
UBA3-204	ENST00000461522	TAF11	Q15544	211 aa		4.14	□□□□□ -1.75
UBA3-204	ENST00000461522	CCDC6	Q16204	474 aa		4.14	□□□□□ -1.75
UBA3-204	ENST00000461522	SLC15A2	Q16348	729 aa		4.14	□□□□□ -1.75
UBA3-204	ENST00000461522	SGO1	Q5FBB7	561 aa		4.14	□□□□□ -1.75
UBA3-204	ENST00000461522	C1QTNF12	Q5T7M4	302 aa		4.14	□□□□□ -1.75
UBA3-204	ENST00000461522	KRT77	Q7Z794	578 aa		4.14	□□□□□ -1.75
UBA3-204	ENST00000461522	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	4.14	□□□□□ -1.75
UBA3-204	ENST00000461522	TADA2B	Q86TJ2	420 aa		4.14	□□□□□ -1.75
UBA3-204	ENST00000461522	TMTC1	Q8IUR5	882 aa		4.14	□□□□□ -1.75
UBA3-204	ENST00000461522	CHCHD4	Q8N4Q1	142 aa		4.14	□□□□□ -1.75
UBA3-204	ENST00000461522	PLD5	Q8N7P1	536 aa		4.14	□□□□□ -1.75
UBA3-204	ENST00000461522	TNIP2	Q8NFZ5	429 aa		4.14	□□□□□ -1.75
UBA3-204	ENST00000461522	MAGEC3	Q8TD91	643 aa		4.14	□□□□□ -1.75
UBA3-204	ENST00000461522	LRRC8C	Q8TDW0	803 aa		4.14	□□□□□ -1.75
UBA3-204	ENST00000461522	RND1	Q92730	232 aa		4.14	□□□□□ -1.75
UBA3-204	ENST00000461522	KXD1	Q9BQD3	176 aa		4.14	□□□□□ -1.75
UBA3-204	ENST00000461522	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	4.14	□□□□□ -1.75
UBA3-204	ENST00000461522	MKKS	Q9NPJ1	570 aa	Predicted RBP	4.14	□□□□□ -1.75
UBA3-204	ENST00000461522	MIS18A	Q9NYP9	233 aa		4.14	□□□□□ -1.75
UBA3-204	ENST00000461522	CTNNAL1	Q9UBT7	734 aa		4.14	□□□□□ -1.75
UBA3-204	ENST00000461522	FBXO2	Q9UK22	296 aa	Predicted RBP	4.14	□□□□□ -1.75
UBA3-204	ENST00000461522	GAB2	Q9UQC2	676 aa		4.14	□□□□□ -1.75
UBA3-204	ENST00000461522	RABGAP1	Q9Y3P9	1069 aa		4.14	□□□□□ -1.75
UBA3-204	ENST00000461522	STON1	Q9Y6Q2	735 aa		4.14	□□□□□ -1.75
UBA3-204	ENST00000461522	PTPRC	P08575	1304 aa		4.14	□□□□□ -1.75
UBA3-204	ENST00000461522	ZNF831	Q5JPB2	1677 aa		4.13	□□□□□ -1.75
UBA3-204	ENST00000461522	C16orf97	H3BN30	126 aa		4.13	□□□□□ -1.75
UBA3-204	ENST00000461522	DDX58	O95786	925 aa	Known RBP	4.13	□□□□□ -1.75
UBA3-204	ENST00000461522	ATP1A1	P05023	1023 aa	Known RBP	4.13	□□□□□ -1.75
UBA3-204	ENST00000461522	CETP	P11597	493 aa		4.13	□□□□□ -1.75
UBA3-204	ENST00000461522	CLCN3	P51790	818 aa		4.13	□□□□□ -1.75
UBA3-204	ENST00000461522	EFNA5	P52803	228 aa		4.13	□□□□□ -1.75
UBA3-204	ENST00000461522	RARS	P54136	660 aa	Known RBP	4.13	□□□□□ -1.75
UBA3-204	ENST00000461522	EFNB1	P98172	346 aa		4.13	□□□□□ -1.75
UBA3-204	ENST00000461522	SIM2	Q14190	667 aa	Predicted RBP	4.13	□□□□□ -1.75
UBA3-204	ENST00000461522	GRAMD1B	Q3KR37	738 aa		4.13	□□□□□ -1.75
UBA3-204	ENST00000461522	ALF	Q53S48	1182 aa		4.13	□□□□□ -1.75
UBA3-204	ENST00000461522	LCE1F	Q5T754	118 aa		4.13	□□□□□ -1.75
UBA3-204	ENST00000461522	ATG16L1	Q676U5	607 aa		4.13	□□□□□ -1.75
UBA3-204	ENST00000461522	C19orf48	Q6RUI8	117 aa		4.13	□□□□□ -1.75
UBA3-204	ENST00000461522	GFRAL	Q6UXV0	394 aa		4.13	□□□□□ -1.75
UBA3-204	ENST00000461522	DEFB132	Q7Z7B7	95 aa		4.13	□□□□□ -1.75
UBA3-204	ENST00000461522	DSG4	Q86SJ6	1040 aa		4.13	□□□□□ -1.75
UBA3-204	ENST00000461522	LMNTD2	Q8IXW0	634 aa		4.13	□□□□□ -1.75
UBA3-204	ENST00000461522	SMAP1	Q8IYB5	467 aa	Predicted RBP	4.13	□□□□□ -1.75
UBA3-204	ENST00000461522	TSPYL6	Q8N831	410 aa		4.13	□□□□□ -1.75
UBA3-204	ENST00000461522	C11orf65	Q8NCR3	313 aa		4.13	□□□□□ -1.75
UBA3-204	ENST00000461522	BEST2	Q8NFU1	509 aa		4.13	□□□□□ -1.75
UBA3-204	ENST00000461522	OR13A1	Q8NGR1	328 aa		4.13	□□□□□ -1.75
UBA3-204	ENST00000461522	CCDC47	Q96A33	483 aa	Known RBP	4.13	□□□□□ -1.75
UBA3-204	ENST00000461522	ZNF570	Q96NI8	536 aa		4.13	□□□□□ -1.75
UBA3-204	ENST00000461522	ISCA1	Q9BUE6	129 aa		4.13	□□□□□ -1.75
UBA3-204	ENST00000461522	KCNN2	Q9H2S1	579 aa		4.13	□□□□□ -1.75
UBA3-204	ENST00000461522	FBRSL1	Q9HCM7	1045 aa	Known RBP	4.13	□□□□□ -1.75
UBA3-204	ENST00000461522	ZNF334	Q9HCZ1	680 aa	Predicted RBP	4.13	□□□□□ -1.75
UBA3-204	ENST00000461522	NARF	Q9UHQ1	456 aa		4.13	□□□□□ -1.75

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