RNA–Protein interactions for RNA: ENST00000460110.5

NUDCD3-203, Transcript of NudC domain containing 3, humanhuman

TSL 1 (best)

Gene NUDCD3, Length 3,641 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-203ENST00000460110 ETV3P41162 512 aa9.27□□□□□ -0.92
NUDCD3-203ENST00000460110 HTRA4P83105 476 aaPredicted RBP9.27□□□□□ -0.92
NUDCD3-203ENST00000460110 CACNG1Q06432 222 aa9.27□□□□□ -0.92
NUDCD3-203ENST00000460110 ABRQ12979 859 aa9.27□□□□□ -0.92
NUDCD3-203ENST00000460110 ZSWIM9Q86XI8 627 aa9.27□□□□□ -0.92
NUDCD3-203ENST00000460110 SLC22A9Q8IVM8 553 aa9.27□□□□□ -0.92
NUDCD3-203ENST00000460110 KIRREL3Q8IZU9 778 aa9.27□□□□□ -0.92
NUDCD3-203ENST00000460110 GPR26Q8NDV2 337 aa9.27□□□□□ -0.92
NUDCD3-203ENST00000460110 CEP70Q8NHQ1 597 aa9.27□□□□□ -0.92
NUDCD3-203ENST00000460110 METTL6Q8TCB7 284 aa9.27□□□□□ -0.92
NUDCD3-203ENST00000460110 KLK6Q92876 244 aa9.27□□□□□ -0.92
NUDCD3-203ENST00000460110 CLP1Q92989 425 aaKnown RBP9.27□□□□□ -0.92
NUDCD3-203ENST00000460110 RCN3Q96D15 328 aa9.27□□□□□ -0.92
NUDCD3-203ENST00000460110 EID2BQ96D98 161 aa9.27□□□□□ -0.92
NUDCD3-203ENST00000460110 CEP295NLQ96MC4 621 aa9.27□□□□□ -0.92
NUDCD3-203ENST00000460110 RANBP9Q96S59 729 aa9.27□□□□□ -0.92
NUDCD3-203ENST00000460110 KXD1Q9BQD3 176 aa9.27□□□□□ -0.92
NUDCD3-203ENST00000460110 LRMDAQ9H2I8 198 aa9.27□□□□□ -0.92
NUDCD3-203ENST00000460110 HSFX1Q9UBD0 423 aa9.27□□□□□ -0.92
NUDCD3-203ENST00000460110 APPL1Q9UKG1 709 aa9.27□□□□□ -0.92
NUDCD3-203ENST00000460110 A0A1W2PQ67 120 aa9.27□□□□□ -0.93
NUDCD3-203ENST00000460110 KRT36O76013 467 aa9.27□□□□□ -0.93
NUDCD3-203ENST00000460110 SORBS2O94875 1100 aaKnown RBP9.27□□□□□ -0.93
NUDCD3-203ENST00000460110 PCDH8O95206 1070 aa9.27□□□□□ -0.93
NUDCD3-203ENST00000460110 EPHX1P07099 455 aa9.27□□□□□ -0.93
NUDCD3-203ENST00000460110 ADH5P11766 374 aa9.27□□□□□ -0.93
NUDCD3-203ENST00000460110 CD1DP15813 335 aa9.27□□□□□ -0.93
NUDCD3-203ENST00000460110 OGNP20774 298 aaKnown RBP9.27□□□□□ -0.93
NUDCD3-203ENST00000460110 HMOX2P30519 316 aa9.27□□□□□ -0.93
NUDCD3-203ENST00000460110 HMGCLP35914 325 aa9.27□□□□□ -0.93
NUDCD3-203ENST00000460110 SPAM1P38567 509 aa9.27□□□□□ -0.93
NUDCD3-203ENST00000460110 SEC13P55735 322 aa9.27□□□□□ -0.93
NUDCD3-203ENST00000460110 MESP2Q0VG99 397 aa9.27□□□□□ -0.93
NUDCD3-203ENST00000460110 ATP13A5Q4VNC0 1218 aa9.27□□□□□ -0.93
NUDCD3-203ENST00000460110 GDPD4Q6W3E5 623 aa9.27□□□□□ -0.93
NUDCD3-203ENST00000460110 Q6ZNB5 142 aa9.27□□□□□ -0.93
NUDCD3-203ENST00000460110 MMAAQ8IVH4 418 aaKnown RBP9.27□□□□□ -0.93
NUDCD3-203ENST00000460110 FAM156AQ8NDB6 213 aa9.27□□□□□ -0.93
NUDCD3-203ENST00000460110 PIH1D2Q8WWB5 315 aa9.27□□□□□ -0.93
NUDCD3-203ENST00000460110 FGF13Q92913 245 aa9.27□□□□□ -0.93
NUDCD3-203ENST00000460110 HEPHQ9BQS7 1158 aa9.27□□□□□ -0.93
NUDCD3-203ENST00000460110 CACNA2D2Q9NY47 1150 aa9.27□□□□□ -0.93
NUDCD3-203ENST00000460110 TMEM114B3SHH9 223 aa9.27□□□□□ -0.93
NUDCD3-203ENST00000460110 STX16-NPEPL1H3BU86 382 aa9.27□□□□□ -0.93
NUDCD3-203ENST00000460110 NR5A2O00482 541 aa9.27□□□□□ -0.93
NUDCD3-203ENST00000460110 CHUKO15111 745 aa9.27□□□□□ -0.93
NUDCD3-203ENST00000460110 COX4I1P13073 169 aa9.27□□□□□ -0.93
NUDCD3-203ENST00000460110 CAMK1Q14012 370 aa9.27□□□□□ -0.93
NUDCD3-203ENST00000460110 CYLC2Q14093 348 aaPredicted RBP9.27□□□□□ -0.93
NUDCD3-203ENST00000460110 CRTC1Q6UUV9 634 aa9.27□□□□□ -0.93
NUDCD3-203ENST00000460110 TMPRSS6Q8IU80 811 aa9.27□□□□□ -0.93
NUDCD3-203ENST00000460110 SFTPA1Q8IWL2 248 aa9.27□□□□□ -0.93
NUDCD3-203ENST00000460110 RBFAQ8N0V3 343 aa9.27□□□□□ -0.93
NUDCD3-203ENST00000460110 RAB3IL1Q8TBN0 382 aa9.27□□□□□ -0.93
NUDCD3-203ENST00000460110 RDH11Q8TC12 318 aa9.27□□□□□ -0.93
NUDCD3-203ENST00000460110 UTP4Q969X6 686 aaKnown RBP9.27□□□□□ -0.93
NUDCD3-203ENST00000460110 GPR78Q96P69 363 aa9.27□□□□□ -0.93
NUDCD3-203ENST00000460110 CDRT15Q96T59 188 aa9.27□□□□□ -0.93
NUDCD3-203ENST00000460110 PBX4Q9BYU1 374 aa9.27□□□□□ -0.93
NUDCD3-203ENST00000460110 NSUN3Q9H649 340 aaKnown RBP9.27□□□□□ -0.93
NUDCD3-203ENST00000460110 TNFRSF12AQ9NP84 129 aa9.27□□□□□ -0.93
NUDCD3-203ENST00000460110 ARL15Q9NXU5 204 aa9.27□□□□□ -0.93
NUDCD3-203ENST00000460110 MSRAQ9UJ68 235 aa9.27□□□□□ -0.93
NUDCD3-203ENST00000460110 PRSS21Q9Y6M0 314 aa9.27□□□□□ -0.93
NUDCD3-203ENST00000460110 CARNS1A5YM72 827 aa9.26□□□□□ -0.93
NUDCD3-203ENST00000460110 TRPC5OSA6NMA1 111 aa9.26□□□□□ -0.93
NUDCD3-203ENST00000460110 SLC9A3R1O14745 358 aaPredicted RBP9.26□□□□□ -0.93
NUDCD3-203ENST00000460110 ELFN1P0C7U0 828 aa9.26□□□□□ -0.93
NUDCD3-203ENST00000460110 PIK3R1P27986 724 aa9.26□□□□□ -0.93
NUDCD3-203ENST00000460110 PRDX3P30048 256 aaKnown RBP9.26□□□□□ -0.93
NUDCD3-203ENST00000460110 MAGEA10P43363 369 aaPredicted RBP9.26□□□□□ -0.93
NUDCD3-203ENST00000460110 POLR2LP62875 67 aaKnown RBP9.26□□□□□ -0.93
NUDCD3-203ENST00000460110 TBL3Q12788 808 aaKnown RBP9.26□□□□□ -0.93
NUDCD3-203ENST00000460110 NFATC2Q13469 925 aa9.26□□□□□ -0.93
NUDCD3-203ENST00000460110 MUM1Q2TAK8 710 aa9.26□□□□□ -0.93
NUDCD3-203ENST00000460110 ZNF284Q2VY69 593 aa9.26□□□□□ -0.93
NUDCD3-203ENST00000460110 KHDC1Q4VXA5 237 aaKnown RBP9.26□□□□□ -0.93
NUDCD3-203ENST00000460110 C2orf27AQ580R0 203 aa9.26□□□□□ -0.93
NUDCD3-203ENST00000460110 FRMD7Q6ZUT3 714 aa9.26□□□□□ -0.93
NUDCD3-203ENST00000460110 LMNTD2Q8IXW0 634 aa9.26□□□□□ -0.93
NUDCD3-203ENST00000460110 NKAPQ8N5F7 415 aaKnown RBP9.26□□□□□ -0.93
NUDCD3-203ENST00000460110 C2orf73Q8N5S3 287 aaPredicted RBP9.26□□□□□ -0.93
NUDCD3-203ENST00000460110 BPIFB1Q8TDL5 484 aa9.26□□□□□ -0.93
NUDCD3-203ENST00000460110 WDR60Q8WVS4 1066 aa9.26□□□□□ -0.93
NUDCD3-203ENST00000460110 PYDC1Q8WXC3 89 aa9.26□□□□□ -0.93
NUDCD3-203ENST00000460110 LRRC3BQ96PB8 259 aa9.26□□□□□ -0.93
NUDCD3-203ENST00000460110 ATG10Q9H0Y0 220 aa9.26□□□□□ -0.93
NUDCD3-203ENST00000460110 PRKAB1Q9Y478 270 aa9.26□□□□□ -0.93
NUDCD3-203ENST00000460110 SYCE1LA8MT33 242 aa9.26□□□□□ -0.93
NUDCD3-203ENST00000460110 HEPACAM2A8MVW5 462 aa9.26□□□□□ -0.93
NUDCD3-203ENST00000460110 MATN2O00339 956 aa9.26□□□□□ -0.93
NUDCD3-203ENST00000460110 H2AFYO75367 372 aaKnown RBP9.26□□□□□ -0.93
NUDCD3-203ENST00000460110 OR4F21O95013 312 aa9.26□□□□□ -0.93
NUDCD3-203ENST00000460110 HIST1H2AGP0C0S8 130 aaPredicted RBP9.26□□□□□ -0.93
NUDCD3-203ENST00000460110 HIST1H2ADP20671 130 aa9.26□□□□□ -0.93
NUDCD3-203ENST00000460110 FSHRP23945 695 aa9.26□□□□□ -0.93
NUDCD3-203ENST00000460110 PTGER3P43115 390 aa9.26□□□□□ -0.93
NUDCD3-203ENST00000460110 FOXA1P55317 472 aa9.26□□□□□ -0.93
NUDCD3-203ENST00000460110 CLCQ05315 142 aa9.26□□□□□ -0.93
NUDCD3-203ENST00000460110 CCDC15Q0P6D6 951 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms