RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 TRIM38O00635 465 aa12.68□□□□□ -0.38
COL18A1-206ENST00000459895 TM4SF5O14894 197 aa12.68□□□□□ -0.38
COL18A1-206ENST00000459895 CBFA2T3O75081 653 aa12.68□□□□□ -0.38
COL18A1-206ENST00000459895 CTAGE8P0CG41 777 aa12.68□□□□□ -0.38
COL18A1-206ENST00000459895 ACRV1P26436 265 aa12.68□□□□□ -0.38
COL18A1-206ENST00000459895 DEKP35659 375 aaKnown RBP12.68□□□□□ -0.38
COL18A1-206ENST00000459895 NPY2RP49146 381 aa12.68□□□□□ -0.38
COL18A1-206ENST00000459895 BLKP51451 505 aa12.68□□□□□ -0.38
COL18A1-206ENST00000459895 CTSCP53634 463 aa12.68□□□□□ -0.38
COL18A1-206ENST00000459895 B4GALNT1Q00973 533 aa12.68□□□□□ -0.38
COL18A1-206ENST00000459895 CACNG1Q06432 222 aa12.68□□□□□ -0.38
COL18A1-206ENST00000459895 DHX9Q08211 1270 aaKnown RBP12.68□□□□□ -0.38
COL18A1-206ENST00000459895 LAMB3Q13751 1172 aa12.68□□□□□ -0.38
COL18A1-206ENST00000459895 SEMA3AQ14563 771 aa12.68□□□□□ -0.38
COL18A1-206ENST00000459895 DBN1Q16643 649 aa12.68□□□□□ -0.38
COL18A1-206ENST00000459895 PYCR3Q53H96 274 aa12.68□□□□□ -0.38
COL18A1-206ENST00000459895 LDLRAP1Q5SW96 308 aa12.68□□□□□ -0.38
COL18A1-206ENST00000459895 DUPD1Q68J44 220 aa12.68□□□□□ -0.38
COL18A1-206ENST00000459895 CASC4Q6P4E1 433 aa12.68□□□□□ -0.38
COL18A1-206ENST00000459895 NLRP9Q7RTR0 991 aa12.68□□□□□ -0.38
COL18A1-206ENST00000459895 PCGF5Q86SE9 256 aa12.68□□□□□ -0.38
COL18A1-206ENST00000459895 CTAGE6Q86UF2 777 aa12.68□□□□□ -0.38
COL18A1-206ENST00000459895 ZNF547Q8IVP9 402 aa12.68□□□□□ -0.38
COL18A1-206ENST00000459895 CTAGE4Q8IX94 777 aa12.68□□□□□ -0.38
COL18A1-206ENST00000459895 FSTL5Q8N475 847 aaPredicted RBP12.68□□□□□ -0.38
COL18A1-206ENST00000459895 EID2Q8N6I1 236 aa12.68□□□□□ -0.38
COL18A1-206ENST00000459895 KYQ8NBH2 561 aa12.68□□□□□ -0.38
COL18A1-206ENST00000459895 OR4C6Q8NH72 309 aa12.68□□□□□ -0.38
COL18A1-206ENST00000459895 ZNF398Q8TD17 642 aa12.68□□□□□ -0.38
COL18A1-206ENST00000459895 SETD7Q8WTS6 366 aaKnown RBP12.68□□□□□ -0.38
COL18A1-206ENST00000459895 PEX13Q92968 403 aa12.68□□□□□ -0.38
COL18A1-206ENST00000459895 HDAC10Q969S8 669 aa12.68□□□□□ -0.38
COL18A1-206ENST00000459895 ULK4Q96C45 1275 aa12.68□□□□□ -0.38
COL18A1-206ENST00000459895 ERP44Q9BS26 406 aa12.68□□□□□ -0.38
COL18A1-206ENST00000459895 RTKNQ9BST9 563 aa12.68□□□□□ -0.38
COL18A1-206ENST00000459895 ZCCHC2Q9C0B9 1178 aaKnown RBP12.68□□□□□ -0.38
COL18A1-206ENST00000459895 DLL3Q9NYJ7 618 aa12.68□□□□□ -0.38
COL18A1-206ENST00000459895 NLGN3Q9NZ94 848 aa12.68□□□□□ -0.38
COL18A1-206ENST00000459895 IL1RAPL1Q9NZN1 696 aa12.68□□□□□ -0.38
COL18A1-206ENST00000459895 SAMD15Q9P1V8 674 aa12.68□□□□□ -0.38
COL18A1-206ENST00000459895 MARCH4Q9P2E8 410 aaPredicted RBP12.68□□□□□ -0.38
COL18A1-206ENST00000459895 PLEKHM1Q9Y4G2 1056 aa12.68□□□□□ -0.38
COL18A1-206ENST00000459895 ESPNB1AK53 854 aa12.67□□□□□ -0.38
COL18A1-206ENST00000459895 B4DGG1 531 aa12.67□□□□□ -0.38
COL18A1-206ENST00000459895 LMO7DNF2Z398 122 aa12.67□□□□□ -0.38
COL18A1-206ENST00000459895 CHUKO15111 745 aa12.67□□□□□ -0.38
COL18A1-206ENST00000459895 NUAK1O60285 661 aa12.67□□□□□ -0.38
COL18A1-206ENST00000459895 ZNF500O60304 480 aaPredicted RBP12.67□□□□□ -0.38
COL18A1-206ENST00000459895 TNFP01375 233 aa12.67□□□□□ -0.38
COL18A1-206ENST00000459895 ACP5P13686 325 aa12.67□□□□□ -0.38
COL18A1-206ENST00000459895 CTSEP14091 401 aa12.67□□□□□ -0.38
COL18A1-206ENST00000459895 KCNA4P22459 653 aa12.67□□□□□ -0.38
COL18A1-206ENST00000459895 AK4P27144 223 aaPredicted RBP12.67□□□□□ -0.38
COL18A1-206ENST00000459895 NOVA1P51513 510 aaKnown RBP12.67□□□□□ -0.38
COL18A1-206ENST00000459895 PRAMEP78395 509 aa12.67□□□□□ -0.38
COL18A1-206ENST00000459895 SLC7A5Q01650 507 aa12.67□□□□□ -0.38
COL18A1-206ENST00000459895 TUBB2AQ13885 445 aa12.67□□□□□ -0.38
COL18A1-206ENST00000459895 ELOCQ15369 112 aa12.67□□□□□ -0.38
COL18A1-206ENST00000459895 HIF1AQ16665 826 aa12.67□□□□□ -0.38
COL18A1-206ENST00000459895 SKIDA1Q1XH10 827 aa12.67□□□□□ -0.38
COL18A1-206ENST00000459895 KIAA0930Q6ICG6 404 aaPredicted RBP12.67□□□□□ -0.38
COL18A1-206ENST00000459895 SLC30A9Q6PML9 568 aa12.67□□□□□ -0.38
COL18A1-206ENST00000459895 DBX2Q6ZNG2 339 aa12.67□□□□□ -0.38
COL18A1-206ENST00000459895 DET1Q7L5Y6 550 aa12.67□□□□□ -0.38
COL18A1-206ENST00000459895 MAATS1Q7Z4T9 603 aa12.67□□□□□ -0.38
COL18A1-206ENST00000459895 SERPINA9Q86WD7 417 aa12.67□□□□□ -0.38
COL18A1-206ENST00000459895 NRROSQ86YC3 692 aa12.67□□□□□ -0.38
COL18A1-206ENST00000459895 TRAPPC5Q8IUR0 188 aa12.67□□□□□ -0.38
COL18A1-206ENST00000459895 SFTPA2Q8IWL1 248 aa12.67□□□□□ -0.38
COL18A1-206ENST00000459895 RASGEF1AQ8N9B8 481 aa12.67□□□□□ -0.38
COL18A1-206ENST00000459895 MNS1Q8NEH6 495 aa12.67□□□□□ -0.38
COL18A1-206ENST00000459895 STAMBPL1Q96FJ0 436 aa12.67□□□□□ -0.38
COL18A1-206ENST00000459895 SIGLEC10Q96LC7 697 aa12.67□□□□□ -0.38
COL18A1-206ENST00000459895 LRRC1Q9BTT6 524 aa12.67□□□□□ -0.38
COL18A1-206ENST00000459895 TUBB2BQ9BVA1 445 aa12.67□□□□□ -0.38
COL18A1-206ENST00000459895 BOCQ9BWV1 1114 aa12.67□□□□□ -0.38
COL18A1-206ENST00000459895 CARD6Q9BX69 1037 aa12.67□□□□□ -0.38
COL18A1-206ENST00000459895 RAB17Q9H0T7 212 aa12.67□□□□□ -0.38
COL18A1-206ENST00000459895 TRIM39Q9HCM9 518 aa12.67□□□□□ -0.38
COL18A1-206ENST00000459895 FTSJ1Q9UET6 329 aa12.67□□□□□ -0.38
COL18A1-206ENST00000459895 CHMP2BQ9UQN3 213 aa12.67□□□□□ -0.38
COL18A1-206ENST00000459895 KCNK6Q9Y257 313 aa12.67□□□□□ -0.38
COL18A1-206ENST00000459895 MAD1L1Q9Y6D9 718 aa12.67□□□□□ -0.38
COL18A1-206ENST00000459895 IGLV3-16A0A075B6K0 115 aa12.66□□□□□ -0.38
COL18A1-206ENST00000459895 LY6G6EA0A0G2JKS1 128 aa12.66□□□□□ -0.38
COL18A1-206ENST00000459895 DCDC2BA2VCK2 349 aa12.66□□□□□ -0.38
COL18A1-206ENST00000459895 OR2AG2A6NM03 316 aa12.66□□□□□ -0.38
COL18A1-206ENST00000459895 GPR89AB7ZAQ6 455 aa12.66□□□□□ -0.38
COL18A1-206ENST00000459895 GIPC1O14908 333 aa12.66□□□□□ -0.38
COL18A1-206ENST00000459895 GRID2O43424 1007 aa12.66□□□□□ -0.38
COL18A1-206ENST00000459895 SIGLEC6O43699 453 aa12.66□□□□□ -0.38
COL18A1-206ENST00000459895 SGTAO43765 313 aa12.66□□□□□ -0.38
COL18A1-206ENST00000459895 VEGFDO43915 354 aa12.66□□□□□ -0.38
COL18A1-206ENST00000459895 F7P08709 466 aaPredicted RBP12.66□□□□□ -0.38
COL18A1-206ENST00000459895 GPR89BP0CG08 455 aa12.66□□□□□ -0.38
COL18A1-206ENST00000459895 MYF5P13349 255 aa12.66□□□□□ -0.38
COL18A1-206ENST00000459895 PGAM1P18669 254 aa12.66□□□□□ -0.38
COL18A1-206ENST00000459895 MSH3P20585 1137 aa12.66□□□□□ -0.38
COL18A1-206ENST00000459895 ACTR1BP42025 376 aa12.66□□□□□ -0.38
COL18A1-206ENST00000459895 ACTR1AP61163 376 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms