RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 ITGA9Q13797 1035 aa9.89□□□□□ -0.83
HDLBP-228ENST00000459788 NOMO1Q15155 1222 aa9.89□□□□□ -0.83
HDLBP-228ENST00000459788 TCEA2Q15560 299 aa9.89□□□□□ -0.83
HDLBP-228ENST00000459788 AGAP9Q5VTM2 703 aa9.89□□□□□ -0.83
HDLBP-228ENST00000459788 ZNF574Q6ZN55 896 aaPredicted RBP9.89□□□□□ -0.83
HDLBP-228ENST00000459788 CCDC81Q6ZN84 652 aa9.89□□□□□ -0.83
HDLBP-228ENST00000459788 PID1Q7Z2X4 250 aa9.89□□□□□ -0.83
HDLBP-228ENST00000459788 TRIM74Q86UV6 250 aa9.89□□□□□ -0.83
HDLBP-228ENST00000459788 LRRTM4Q86VH4 590 aa9.89□□□□□ -0.83
HDLBP-228ENST00000459788 CCDC50Q8IVM0 306 aa9.89□□□□□ -0.83
HDLBP-228ENST00000459788 SYCE1Q8N0S2 351 aa9.89□□□□□ -0.83
HDLBP-228ENST00000459788 ZNF567Q8N184 647 aa9.89□□□□□ -0.83
HDLBP-228ENST00000459788 SLC37A2Q8TED4 501 aa9.89□□□□□ -0.83
HDLBP-228ENST00000459788 PTCD2Q8WV60 388 aaKnown RBP9.89□□□□□ -0.83
HDLBP-228ENST00000459788 ZNF514Q96K75 400 aaPredicted RBP9.89□□□□□ -0.83
HDLBP-228ENST00000459788 SMIM14Q96QK8 99 aa9.89□□□□□ -0.83
HDLBP-228ENST00000459788 TAAR9Q96RI9 348 aa9.89□□□□□ -0.83
HDLBP-228ENST00000459788 SLC38A3Q99624 504 aa9.89□□□□□ -0.83
HDLBP-228ENST00000459788 ZPBPQ9BS86 351 aa9.89□□□□□ -0.83
HDLBP-228ENST00000459788 FOXP3Q9BZS1 431 aa9.89□□□□□ -0.83
HDLBP-228ENST00000459788 SMOXQ9NWM0 555 aa9.89□□□□□ -0.83
HDLBP-228ENST00000459788 KLHL8Q9P2G9 620 aaPredicted RBP9.89□□□□□ -0.83
HDLBP-228ENST00000459788 IMPACTQ9P2X3 320 aa9.89□□□□□ -0.83
HDLBP-228ENST00000459788 ATXN10Q9UBB4 475 aa9.89□□□□□ -0.83
HDLBP-228ENST00000459788 AAR2Q9Y312 384 aaKnown RBP9.89□□□□□ -0.83
HDLBP-228ENST00000459788 A0A0U1RQS6 177 aa9.88□□□□□ -0.83
HDLBP-228ENST00000459788 MIF4GDA9UHW6 222 aaKnown RBP9.88□□□□□ -0.83
HDLBP-228ENST00000459788 PMPCBO75439 489 aa9.88□□□□□ -0.83
HDLBP-228ENST00000459788 TJP3O95049 919 aa9.88□□□□□ -0.83
HDLBP-228ENST00000459788 ATP1A1P05023 1023 aaKnown RBP9.88□□□□□ -0.83
HDLBP-228ENST00000459788 ANKRD34CP0C6C1 535 aa9.88□□□□□ -0.83
HDLBP-228ENST00000459788 PYGMP11217 842 aa9.88□□□□□ -0.83
HDLBP-228ENST00000459788 TNNT1P13805 278 aa9.88□□□□□ -0.83
HDLBP-228ENST00000459788 ZNF7P17097 686 aaPredicted RBP9.88□□□□□ -0.83
HDLBP-228ENST00000459788 NFKB1P19838 968 aa9.88□□□□□ -0.83
HDLBP-228ENST00000459788 CDC25BP30305 580 aa9.88□□□□□ -0.83
HDLBP-228ENST00000459788 CSTF2P33240 577 aaKnown RBP eCLIP9.88□□□□□ -0.83
HDLBP-228ENST00000459788 VAV2P52735 878 aa9.88□□□□□ -0.83
HDLBP-228ENST00000459788 RWDD2BP57060 319 aa9.88□□□□□ -0.83
HDLBP-228ENST00000459788 UBE2IP63279 158 aaKnown RBP9.88□□□□□ -0.83
HDLBP-228ENST00000459788 DMPKQ09013 629 aa9.88□□□□□ -0.83
HDLBP-228ENST00000459788 C16orf72Q14CZ0 275 aa9.88□□□□□ -0.83
HDLBP-228ENST00000459788 SLC1A5Q15758 541 aa9.88□□□□□ -0.83
HDLBP-228ENST00000459788 PCSK7Q16549 785 aa9.88□□□□□ -0.83
HDLBP-228ENST00000459788 AMZ1Q400G9 498 aa9.88□□□□□ -0.83
HDLBP-228ENST00000459788 LDLRAP1Q5SW96 308 aa9.88□□□□□ -0.83
HDLBP-228ENST00000459788 PHF19Q5T6S3 580 aa9.88□□□□□ -0.83
HDLBP-228ENST00000459788 FOXR1Q6PIV2 292 aa9.88□□□□□ -0.83
HDLBP-228ENST00000459788 ABRAXAS1Q6UWZ7 409 aa9.88□□□□□ -0.83
HDLBP-228ENST00000459788 MARK2Q7KZI7 788 aaKnown RBP9.88□□□□□ -0.83
HDLBP-228ENST00000459788 CHST15Q7LFX5 561 aaPredicted RBP9.88□□□□□ -0.83
HDLBP-228ENST00000459788 TMPRSS9Q7Z410 1059 aa9.88□□□□□ -0.83
HDLBP-228ENST00000459788 ADGRG6Q86SQ4 1221 aa9.88□□□□□ -0.83
HDLBP-228ENST00000459788 DTX1Q86Y01 620 aa9.88□□□□□ -0.83
HDLBP-228ENST00000459788 CDKL3Q8IVW4 592 aaPredicted RBP9.88□□□□□ -0.83
HDLBP-228ENST00000459788 SFTPA2Q8IWL1 248 aa9.88□□□□□ -0.83
HDLBP-228ENST00000459788 KLHDC8BQ8IXV7 354 aa9.88□□□□□ -0.83
HDLBP-228ENST00000459788 TTC30BQ8N4P2 665 aa9.88□□□□□ -0.83
HDLBP-228ENST00000459788 TTC13Q8NBP0 860 aa9.88□□□□□ -0.83
HDLBP-228ENST00000459788 SPATA22Q8NHS9 363 aa9.88□□□□□ -0.83
HDLBP-228ENST00000459788 LRRN4Q8WUT4 740 aa9.88□□□□□ -0.83
HDLBP-228ENST00000459788 SLC39A7Q92504 469 aa9.88□□□□□ -0.83
HDLBP-228ENST00000459788 CRELD1Q96HD1 420 aa9.88□□□□□ -0.83
HDLBP-228ENST00000459788 AHCYL2Q96HN2 611 aaKnown RBP9.88□□□□□ -0.83
HDLBP-228ENST00000459788 MRGPRX2Q96LB1 330 aa9.88□□□□□ -0.83
HDLBP-228ENST00000459788 BBC3Q96PG8 261 aaPredicted RBP9.88□□□□□ -0.83
HDLBP-228ENST00000459788 CEP41Q9BYV8 373 aa9.88□□□□□ -0.83
HDLBP-228ENST00000459788 OSBPL8Q9BZF1 889 aa9.88□□□□□ -0.83
HDLBP-228ENST00000459788 GBA3Q9H227 469 aa9.88□□□□□ -0.83
HDLBP-228ENST00000459788 SEMA6CQ9H3T2 930 aa9.88□□□□□ -0.83
HDLBP-228ENST00000459788 IL17CQ9P0M4 197 aa9.88□□□□□ -0.83
HDLBP-228ENST00000459788 SAE1Q9UBE0 346 aaPredicted RBP9.88□□□□□ -0.83
HDLBP-228ENST00000459788 CPNE7Q9UBL6 633 aa9.88□□□□□ -0.83
HDLBP-228ENST00000459788 TBC1D29Q9UFV1 150 aa9.88□□□□□ -0.83
HDLBP-228ENST00000459788 PISDQ9UG56 409 aa9.88□□□□□ -0.83
HDLBP-228ENST00000459788 SHOC2Q9UQ13 582 aa9.88□□□□□ -0.83
HDLBP-228ENST00000459788 PKP3Q9Y446 797 aa9.88□□□□□ -0.83
HDLBP-228ENST00000459788 HYOU1Q9Y4L1 999 aa9.88□□□□□ -0.83
HDLBP-228ENST00000459788 PCDHB11Q9Y5F2 797 aa9.88□□□□□ -0.83
HDLBP-228ENST00000459788 MN1Q10571 1320 aaPredicted RBP9.87□□□□□ -0.83
HDLBP-228ENST00000459788 ZNF462Q96JM2 2506 aa9.87□□□□□ -0.83
HDLBP-228ENST00000459788 C5orf60A6NFR6 353 aa9.87□□□□□ -0.83
HDLBP-228ENST00000459788 STMND1H3BQB6 276 aa9.87□□□□□ -0.83
HDLBP-228ENST00000459788 CASC3O15234 703 aaKnown RBP9.87□□□□□ -0.83
HDLBP-228ENST00000459788 CAPN5O15484 640 aaPredicted RBP9.87□□□□□ -0.83
HDLBP-228ENST00000459788 CDK14O94921 469 aa9.87□□□□□ -0.83
HDLBP-228ENST00000459788 ITGB2P05107 769 aa9.87□□□□□ -0.83
HDLBP-228ENST00000459788 ACP5P13686 325 aa9.87□□□□□ -0.83
HDLBP-228ENST00000459788 ZNF8P17098 575 aaPredicted RBP9.87□□□□□ -0.83
HDLBP-228ENST00000459788 IDSP22304 550 aa9.87□□□□□ -0.83
HDLBP-228ENST00000459788 SPAM1P38567 509 aa9.87□□□□□ -0.83
HDLBP-228ENST00000459788 ADCY2Q08462 1091 aa9.87□□□□□ -0.83
HDLBP-228ENST00000459788 C19orf57Q0VDD7 668 aa9.87□□□□□ -0.83
HDLBP-228ENST00000459788 GTF2H3Q13889 308 aa9.87□□□□□ -0.83
HDLBP-228ENST00000459788 PRPSAP1Q14558 356 aa9.87□□□□□ -0.83
HDLBP-228ENST00000459788 SIRPB2Q5JXA9 342 aa9.87□□□□□ -0.83
HDLBP-228ENST00000459788 CCDC181Q5TID7 509 aa9.87□□□□□ -0.83
HDLBP-228ENST00000459788 KAZNQ674X7 775 aa9.87□□□□□ -0.83
HDLBP-228ENST00000459788 RANBP10Q6VN20 620 aa9.87□□□□□ -0.83
HDLBP-228ENST00000459788 USP53Q70EK8 1073 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms