RNA–Protein interactions for RNA: ENST00000459783.5

MRPL55-223, Transcript of mitochondrial ribosomal protein L55, human

TSL 5 BASIC

Gene MRPL55, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-223	ENST00000459783	NMBR	P28336	390 aa		10.14	□□□□□ -0.79
MRPL55-223	ENST00000459783	PAFAH1B1	P43034	410 aa		10.14	□□□□□ -0.79
MRPL55-223	ENST00000459783	BLK	P51451	505 aa		10.14	□□□□□ -0.79
MRPL55-223	ENST00000459783	CLDN6	P56747	220 aa		10.14	□□□□□ -0.79
MRPL55-223	ENST00000459783	CDK16	Q00536	496 aa		10.14	□□□□□ -0.79
MRPL55-223	ENST00000459783	DR1	Q01658	176 aa		10.14	□□□□□ -0.79
MRPL55-223	ENST00000459783	SEMA3A	Q14563	771 aa		10.14	□□□□□ -0.79
MRPL55-223	ENST00000459783	PPP1R7	Q15435	360 aa		10.14	□□□□□ -0.79
MRPL55-223	ENST00000459783	MSS51	Q4VC12	460 aa		10.14	□□□□□ -0.79
MRPL55-223	ENST00000459783	C6orf132	Q5T0Z8	1188 aa		10.14	□□□□□ -0.79
MRPL55-223	ENST00000459783	ZDHHC20	Q5W0Z9	365 aa		10.14	□□□□□ -0.79
MRPL55-223	ENST00000459783	OGFOD3	Q6PK18	319 aa		10.14	□□□□□ -0.79
MRPL55-223	ENST00000459783	CRTC3	Q6UUV7	619 aa		10.14	□□□□□ -0.79
MRPL55-223	ENST00000459783	CES3	Q6UWW8	571 aa		10.14	□□□□□ -0.79
MRPL55-223	ENST00000459783	PHYKPL	Q8IUZ5	450 aa		10.14	□□□□□ -0.79
MRPL55-223	ENST00000459783	FSTL5	Q8N475	847 aa	Predicted RBP	10.14	□□□□□ -0.79
MRPL55-223	ENST00000459783	FAM181A	Q8N9Y4	354 aa		10.14	□□□□□ -0.79
MRPL55-223	ENST00000459783	MCU	Q8NE86	351 aa		10.14	□□□□□ -0.79
MRPL55-223	ENST00000459783	PATE1	Q8WXA2	126 aa		10.14	□□□□□ -0.79
MRPL55-223	ENST00000459783	SERPINB12	Q96P63	405 aa		10.14	□□□□□ -0.79
MRPL55-223	ENST00000459783	C19orf43	Q9BQ61	176 aa		10.14	□□□□□ -0.79
MRPL55-223	ENST00000459783	WDR83	Q9BRX9	315 aa	Known RBP	10.14	□□□□□ -0.79
MRPL55-223	ENST00000459783	SLC32A1	Q9H598	525 aa		10.14	□□□□□ -0.79
MRPL55-223	ENST00000459783	ASB8	Q9H765	288 aa		10.14	□□□□□ -0.79
MRPL55-223	ENST00000459783	PLAC1	Q9HBJ0	212 aa		10.14	□□□□□ -0.79
MRPL55-223	ENST00000459783	TRNAU1AP	Q9NX07	287 aa	Known RBP	10.14	□□□□□ -0.79
MRPL55-223	ENST00000459783	MARCH4	Q9P2E8	410 aa	Predicted RBP	10.14	□□□□□ -0.79
MRPL55-223	ENST00000459783	GULP1	Q9UBP9	304 aa		10.14	□□□□□ -0.79
MRPL55-223	ENST00000459783	CDC23	Q9UJX2	597 aa		10.14	□□□□□ -0.79
MRPL55-223	ENST00000459783	RIMKLB	Q9ULI2	386 aa		10.14	□□□□□ -0.79
MRPL55-223	ENST00000459783	GPSM3	Q9Y4H4	160 aa		10.14	□□□□□ -0.79
MRPL55-223	ENST00000459783	PCNX2	A6NKB5	2137 aa		10.13	□□□□□ -0.79
MRPL55-223	ENST00000459783	TDRD6	O60522	2096 aa	Known RBP	10.13	□□□□□ -0.79
MRPL55-223	ENST00000459783	IGLV3-16	A0A075B6K0	115 aa		10.13	□□□□□ -0.79
MRPL55-223	ENST00000459783		A6NCN8	305 aa		10.13	□□□□□ -0.79
MRPL55-223	ENST00000459783	GRID2	O43424	1007 aa		10.13	□□□□□ -0.79
MRPL55-223	ENST00000459783	RAD51C	O43502	376 aa		10.13	□□□□□ -0.79
MRPL55-223	ENST00000459783	TNFSF14	O43557	240 aa		10.13	□□□□□ -0.79
MRPL55-223	ENST00000459783	GOT2	P00505	430 aa	Known RBP	10.13	□□□□□ -0.79
MRPL55-223	ENST00000459783	ANXA6	P08133	673 aa		10.13	□□□□□ -0.79
MRPL55-223	ENST00000459783	ACP5	P13686	325 aa		10.13	□□□□□ -0.79
MRPL55-223	ENST00000459783	CTSE	P14091	401 aa		10.13	□□□□□ -0.79
MRPL55-223	ENST00000459783	RPL21	P46778	160 aa	Known RBP	10.13	□□□□□ -0.79
MRPL55-223	ENST00000459783	NPY2R	P49146	381 aa		10.13	□□□□□ -0.79
MRPL55-223	ENST00000459783	PDE1B	Q01064	536 aa		10.13	□□□□□ -0.79
MRPL55-223	ENST00000459783	TMEM115	Q12893	351 aa	Predicted RBP	10.13	□□□□□ -0.79
MRPL55-223	ENST00000459783	ELOC	Q15369	112 aa		10.13	□□□□□ -0.79
MRPL55-223	ENST00000459783	SMAD1	Q15797	465 aa	Known RBP	10.13	□□□□□ -0.79
MRPL55-223	ENST00000459783	DBN1	Q16643	649 aa		10.13	□□□□□ -0.79
MRPL55-223	ENST00000459783	INAVA	Q3KP66	663 aa		10.13	□□□□□ -0.79
MRPL55-223	ENST00000459783	PLA2G4E	Q3MJ16	856 aa		10.13	□□□□□ -0.79
MRPL55-223	ENST00000459783	PCID2	Q5JVF3	399 aa		10.13	□□□□□ -0.79
MRPL55-223	ENST00000459783	PERM1	Q5SV97	790 aa		10.13	□□□□□ -0.79
MRPL55-223	ENST00000459783	FNBP1L	Q5T0N5	605 aa		10.13	□□□□□ -0.79
MRPL55-223	ENST00000459783	IZUMO3	Q5VZ72	239 aa		10.13	□□□□□ -0.79
MRPL55-223	ENST00000459783	ZCCHC8	Q6NZY4	707 aa	Known RBP	10.13	□□□□□ -0.79
MRPL55-223	ENST00000459783	GUSBP11	Q6P575	273 aa		10.13	□□□□□ -0.79
MRPL55-223	ENST00000459783	SLC30A9	Q6PML9	568 aa		10.13	□□□□□ -0.79
MRPL55-223	ENST00000459783	TAF8	Q7Z7C8	310 aa		10.13	□□□□□ -0.79
MRPL55-223	ENST00000459783	SERPINA9	Q86WD7	417 aa		10.13	□□□□□ -0.79
MRPL55-223	ENST00000459783	C17orf82	Q86X59	251 aa	Predicted RBP	10.13	□□□□□ -0.79
MRPL55-223	ENST00000459783	MARCH9	Q86YJ5	346 aa		10.13	□□□□□ -0.79
MRPL55-223	ENST00000459783	GALNT13	Q8IUC8	556 aa		10.13	□□□□□ -0.79
MRPL55-223	ENST00000459783	NXPE1	Q8N323	547 aa		10.13	□□□□□ -0.79
MRPL55-223	ENST00000459783	GPR156	Q8NFN8	814 aa		10.13	□□□□□ -0.79
MRPL55-223	ENST00000459783	HDAC10	Q969S8	669 aa		10.13	□□□□□ -0.79
MRPL55-223	ENST00000459783	LRRC45	Q96CN5	670 aa		10.13	□□□□□ -0.79
MRPL55-223	ENST00000459783	MFSD3	Q96ES6	412 aa		10.13	□□□□□ -0.79
MRPL55-223	ENST00000459783	SIGLEC10	Q96LC7	697 aa		10.13	□□□□□ -0.79
MRPL55-223	ENST00000459783	FCRL3	Q96P31	734 aa	Predicted RBP	10.13	□□□□□ -0.79
MRPL55-223	ENST00000459783	CDC6	Q99741	560 aa		10.13	□□□□□ -0.79
MRPL55-223	ENST00000459783	KIFC1	Q9BW19	673 aa		10.13	□□□□□ -0.79
MRPL55-223	ENST00000459783	TAAR2	Q9P1P5	351 aa		10.13	□□□□□ -0.79
MRPL55-223	ENST00000459783	SIRPG	Q9P1W8	387 aa		10.13	□□□□□ -0.79
MRPL55-223	ENST00000459783	ASIC3	Q9UHC3	531 aa		10.13	□□□□□ -0.79
MRPL55-223	ENST00000459783	ZNHIT2	Q9UHR6	403 aa		10.13	□□□□□ -0.79
MRPL55-223	ENST00000459783	RABGEF1	Q9UJ41	708 aa		10.13	□□□□□ -0.79
MRPL55-223	ENST00000459783	APPL1	Q9UKG1	709 aa		10.13	□□□□□ -0.79
MRPL55-223	ENST00000459783	SOX13	Q9UN79	622 aa		10.13	□□□□□ -0.79
MRPL55-223	ENST00000459783	GPR34	Q9UPC5	381 aa		10.13	□□□□□ -0.79
MRPL55-223	ENST00000459783	KCNK6	Q9Y257	313 aa		10.13	□□□□□ -0.79
MRPL55-223	ENST00000459783	PRSS21	Q9Y6M0	314 aa		10.13	□□□□□ -0.79
MRPL55-223	ENST00000459783	NCOR2	Q9Y618	2525 aa		10.13	□□□□□ -0.79
MRPL55-223	ENST00000459783	NEMP2	A6NFY4	417 aa		10.12	□□□□□ -0.79
MRPL55-223	ENST00000459783	OR2AG2	A6NM03	316 aa		10.12	□□□□□ -0.79
MRPL55-223	ENST00000459783		B4DGG1	531 aa		10.12	□□□□□ -0.79
MRPL55-223	ENST00000459783	VEGFD	O43915	354 aa		10.12	□□□□□ -0.79
MRPL55-223	ENST00000459783	URI1	O94763	535 aa	Predicted RBP	10.12	□□□□□ -0.79
MRPL55-223	ENST00000459783	CDK14	O94921	469 aa		10.12	□□□□□ -0.79
MRPL55-223	ENST00000459783	F7	P08709	466 aa	Predicted RBP	10.12	□□□□□ -0.79
MRPL55-223	ENST00000459783	CKMT1A	P12532	417 aa		10.12	□□□□□ -0.79
MRPL55-223	ENST00000459783	MLN	P12872	115 aa		10.12	□□□□□ -0.79
MRPL55-223	ENST00000459783	CKMT2	P17540	419 aa		10.12	□□□□□ -0.79
MRPL55-223	ENST00000459783	ITGAL	P20701	1170 aa		10.12	□□□□□ -0.79
MRPL55-223	ENST00000459783	ACP1	P24666	158 aa		10.12	□□□□□ -0.79
MRPL55-223	ENST00000459783	ACRV1	P26436	265 aa		10.12	□□□□□ -0.79
MRPL55-223	ENST00000459783	HADHA	P40939	763 aa		10.12	□□□□□ -0.79
MRPL55-223	ENST00000459783	ACTR1B	P42025	376 aa		10.12	□□□□□ -0.79
MRPL55-223	ENST00000459783	MAZ	P56270	477 aa	Known RBP	10.12	□□□□□ -0.79
MRPL55-223	ENST00000459783	ACTR1A	P61163	376 aa		10.12	□□□□□ -0.79

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