RNA–Protein interactions for RNA: ENST00000459706.1

DDX1-204, Transcript of DEAD-box helicase 1, humanhuman

TSL 3

Gene DDX1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-204ENST00000459706 TMEM139Q8IV31 216 aa5.9□□□□□ -1.46
DDX1-204ENST00000459706 TMEM86AQ8N2M4 240 aa5.9□□□□□ -1.46
DDX1-204ENST00000459706 LRRC43Q8N309 656 aa5.9□□□□□ -1.46
DDX1-204ENST00000459706 MSANTD4Q8NCY6 345 aa5.9□□□□□ -1.46
DDX1-204ENST00000459706 APPL2Q8NEU8 664 aa5.9□□□□□ -1.46
DDX1-204ENST00000459706 ABHD11Q8NFV4 315 aa5.9□□□□□ -1.46
DDX1-204ENST00000459706 OR52L2PQ8NGH6 319 aa5.9□□□□□ -1.46
DDX1-204ENST00000459706 KIAA1524Q8TCG1 905 aa5.9□□□□□ -1.46
DDX1-204ENST00000459706 RFFLQ8WZ73 363 aa5.9□□□□□ -1.46
DDX1-204ENST00000459706 HTRA1Q92743 480 aa5.9□□□□□ -1.46
DDX1-204ENST00000459706 PLEKHG4BQ96PX9 1271 aa5.9□□□□□ -1.46
DDX1-204ENST00000459706 MMS19Q96T76 1030 aa5.9□□□□□ -1.46
DDX1-204ENST00000459706 TMEM175Q9BSA9 504 aa5.9□□□□□ -1.46
DDX1-204ENST00000459706 PI4K2AQ9BTU6 479 aa5.9□□□□□ -1.46
DDX1-204ENST00000459706 GPR88Q9GZN0 384 aa5.9□□□□□ -1.46
DDX1-204ENST00000459706 PDCL3Q9H2J4 239 aa5.9□□□□□ -1.46
DDX1-204ENST00000459706 HAUS4Q9H6D7 363 aa5.9□□□□□ -1.46
DDX1-204ENST00000459706 APOBEC3GQ9HC16 384 aaKnown RBP5.9□□□□□ -1.46
DDX1-204ENST00000459706 ARHGEF3Q9NR81 526 aa5.9□□□□□ -1.46
DDX1-204ENST00000459706 CISHQ9NSE2 258 aa5.9□□□□□ -1.46
DDX1-204ENST00000459706 GAR1Q9NY12 217 aaKnown RBP5.9□□□□□ -1.46
DDX1-204ENST00000459706 TUBGCP4Q9UGJ1 667 aa5.9□□□□□ -1.46
DDX1-204ENST00000459706 SIX4Q9UIU6 781 aa5.9□□□□□ -1.46
DDX1-204ENST00000459706 FBXO9Q9UK97 447 aaPredicted RBP5.9□□□□□ -1.46
DDX1-204ENST00000459706 BARX2Q9UMQ3 279 aaPredicted RBP5.9□□□□□ -1.46
DDX1-204ENST00000459706 SNX9Q9Y5X1 595 aa5.9□□□□□ -1.46
DDX1-204ENST00000459706 SCINQ9Y6U3 715 aa5.9□□□□□ -1.46
DDX1-204ENST00000459706 TTC3P53804 2025 aa5.9□□□□□ -1.47
DDX1-204ENST00000459706 TSC2P49815 1807 aa5.9□□□□□ -1.47
DDX1-204ENST00000459706 COL4A6Q14031 1691 aa5.89□□□□□ -1.47
DDX1-204ENST00000459706 UNC119BA6NIH7 251 aa5.89□□□□□ -1.47
DDX1-204ENST00000459706 GUCY1B2O75343 617 aa5.89□□□□□ -1.47
DDX1-204ENST00000459706 KRT38O76015 456 aa5.89□□□□□ -1.47
DDX1-204ENST00000459706 LSM8O95777 96 aaKnown RBP5.89□□□□□ -1.47
DDX1-204ENST00000459706 PDHA1P08559 390 aa5.89□□□□□ -1.47
DDX1-204ENST00000459706 HKR1P10072 659 aa5.89□□□□□ -1.47
DDX1-204ENST00000459706 ITGAMP11215 1152 aa5.89□□□□□ -1.47
DDX1-204ENST00000459706 ODC1P11926 461 aa5.89□□□□□ -1.47
DDX1-204ENST00000459706 GZMAP12544 262 aa5.89□□□□□ -1.47
DDX1-204ENST00000459706 CYP11B1P15538 503 aa5.89□□□□□ -1.47
DDX1-204ENST00000459706 TNFAIP3P21580 790 aa5.89□□□□□ -1.47
DDX1-204ENST00000459706 AVPR1BP47901 424 aa5.89□□□□□ -1.47
DDX1-204ENST00000459706 LHX1P48742 406 aa5.89□□□□□ -1.47
DDX1-204ENST00000459706 CCR5P51681 352 aa5.89□□□□□ -1.47
DDX1-204ENST00000459706 CLCNKBP51801 687 aa5.89□□□□□ -1.47
DDX1-204ENST00000459706 ZNF132P52740 706 aa5.89□□□□□ -1.47
DDX1-204ENST00000459706 SNX16P57768 344 aa5.89□□□□□ -1.47
DDX1-204ENST00000459706 CDR2Q01850 454 aa5.89□□□□□ -1.47
DDX1-204ENST00000459706 DSC1Q08554 894 aa5.89□□□□□ -1.47
DDX1-204ENST00000459706 GOLGA8FQ08AF8 430 aa5.89□□□□□ -1.47
DDX1-204ENST00000459706 GOLGA8DPQ0D2H9 430 aa5.89□□□□□ -1.47
DDX1-204ENST00000459706 TBL3Q12788 808 aaKnown RBP5.89□□□□□ -1.47
DDX1-204ENST00000459706 KIF5AQ12840 1032 aa5.89□□□□□ -1.47
DDX1-204ENST00000459706 EIF2B5Q13144 721 aaKnown RBP5.89□□□□□ -1.47
DDX1-204ENST00000459706 GPNMBQ14956 572 aa5.89□□□□□ -1.47
DDX1-204ENST00000459706 NAB2Q15742 525 aa5.89□□□□□ -1.47
DDX1-204ENST00000459706 BAK1Q16611 211 aa5.89□□□□□ -1.47
DDX1-204ENST00000459706 ERCC6LQ2NKX8 1250 aa5.89□□□□□ -1.47
DDX1-204ENST00000459706 SPOPLQ6IQ16 392 aa5.89□□□□□ -1.47
DDX1-204ENST00000459706 WDR93Q6P2C0 686 aa5.89□□□□□ -1.47
DDX1-204ENST00000459706 DENND1BQ6P3S1 775 aa5.89□□□□□ -1.47
DDX1-204ENST00000459706 GJB7Q6PEY0 223 aa5.89□□□□□ -1.47
DDX1-204ENST00000459706 TMEM88Q6PEY1 159 aa5.89□□□□□ -1.47
DDX1-204ENST00000459706 DCLRE1AQ6PJP8 1040 aa5.89□□□□□ -1.47
DDX1-204ENST00000459706 Q6ZWC4 215 aa5.89□□□□□ -1.47
DDX1-204ENST00000459706 SYT13Q7L8C5 426 aa5.89□□□□□ -1.47
DDX1-204ENST00000459706 DEFB128Q7Z7B8 93 aa5.89□□□□□ -1.47
DDX1-204ENST00000459706 KIAA1328Q86T90 577 aa5.89□□□□□ -1.47
DDX1-204ENST00000459706 METTL23Q86XA0 190 aa5.89□□□□□ -1.47
DDX1-204ENST00000459706 P3H2Q8IVL5 708 aa5.89□□□□□ -1.47
DDX1-204ENST00000459706 FAM71DQ8N9W8 422 aa5.89□□□□□ -1.47
DDX1-204ENST00000459706 UBE2Q2Q8WVN8 375 aa5.89□□□□□ -1.47
DDX1-204ENST00000459706 C18orf25Q96B23 403 aaPredicted RBP5.89□□□□□ -1.47
DDX1-204ENST00000459706 SH3KBP1Q96B97 665 aa5.89□□□□□ -1.47
DDX1-204ENST00000459706 WDYHV1Q96HA8 205 aa5.89□□□□□ -1.47
DDX1-204ENST00000459706 Q96MF0 132 aa5.89□□□□□ -1.47
DDX1-204ENST00000459706 ZNF830Q96NB3 372 aaPredicted RBP5.89□□□□□ -1.47
DDX1-204ENST00000459706 CHP1Q99653 195 aa5.89□□□□□ -1.47
DDX1-204ENST00000459706 AGPAT1Q99943 283 aa5.89□□□□□ -1.47
DDX1-204ENST00000459706 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.89□□□□□ -1.47
DDX1-204ENST00000459706 MIS12Q9H081 205 aa5.89□□□□□ -1.47
DDX1-204ENST00000459706 PREBQ9HCU5 417 aa5.89□□□□□ -1.47
DDX1-204ENST00000459706 KCND3Q9UK17 655 aa5.89□□□□□ -1.47
DDX1-204ENST00000459706 SUFUQ9UMX1 484 aa5.89□□□□□ -1.47
DDX1-204ENST00000459706 DNAJC16Q9Y2G8 782 aa5.89□□□□□ -1.47
DDX1-204ENST00000459706 PPP2R2CQ9Y2T4 447 aa5.89□□□□□ -1.47
DDX1-204ENST00000459706 SCN1AP35498 2009 aa5.89□□□□□ -1.47
DDX1-204ENST00000459706 TBC1D3DA0A087WVF3 549 aa5.88□□□□□ -1.47
DDX1-204ENST00000459706 TBC1D3IA0A087WXS9 549 aa5.88□□□□□ -1.47
DDX1-204ENST00000459706 TBC1D3EA0A087X179 549 aa5.88□□□□□ -1.47
DDX1-204ENST00000459706 TBC1D3KA0A087X1G2 549 aa5.88□□□□□ -1.47
DDX1-204ENST00000459706 TBC1D3BA6NDS4 549 aa5.88□□□□□ -1.47
DDX1-204ENST00000459706 TBC1D3FA6NER0 549 aaPredicted RBP5.88□□□□□ -1.47
DDX1-204ENST00000459706 CASTOR2A6NHX0 329 aa5.88□□□□□ -1.47
DDX1-204ENST00000459706 BTNL10A8MVZ5 291 aa5.88□□□□□ -1.47
DDX1-204ENST00000459706 B4E171 279 aa5.88□□□□□ -1.47
DDX1-204ENST00000459706 TBC1D3LB9A6J9 549 aa5.88□□□□□ -1.47
DDX1-204ENST00000459706 SYN3O14994 580 aa5.88□□□□□ -1.47
DDX1-204ENST00000459706 ZNF500O60304 480 aaPredicted RBP5.88□□□□□ -1.47
DDX1-204ENST00000459706 RTN2O75298 545 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms