RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 KLHL23Q8NBE8 558 aa14.03□□□□□ -0.16
SCFD1-203ENST00000458591 BRSK1Q8TDC3 778 aa14.03□□□□□ -0.16
SCFD1-203ENST00000458591 KIAA1191Q96A73 305 aa14.03□□□□□ -0.16
SCFD1-203ENST00000458591 BIRC7Q96CA5 298 aa14.03□□□□□ -0.16
SCFD1-203ENST00000458591 RMDN1Q96DB5 314 aa14.03□□□□□ -0.16
SCFD1-203ENST00000458591 SPON2Q9BUD6 331 aa14.03□□□□□ -0.16
SCFD1-203ENST00000458591 TFB2MQ9H5Q4 396 aaKnown RBP14.03□□□□□ -0.16
SCFD1-203ENST00000458591 NANOGQ9H9S0 305 aa14.03□□□□□ -0.16
SCFD1-203ENST00000458591 TRMT13Q9NUP7 481 aaKnown RBP14.03□□□□□ -0.16
SCFD1-203ENST00000458591 ANKRD12Q6UB98 2062 aa14.03□□□□□ -0.16
SCFD1-203ENST00000458591 A0A1W2PPW3 197 aa14.03□□□□□ -0.16
SCFD1-203ENST00000458591 H0Y858 1186 aa14.03□□□□□ -0.16
SCFD1-203ENST00000458591 KERAO60938 352 aa14.03□□□□□ -0.16
SCFD1-203ENST00000458591 ZNF623O75123 536 aa14.03□□□□□ -0.16
SCFD1-203ENST00000458591 ARL1P40616 181 aaPredicted RBP14.03□□□□□ -0.16
SCFD1-203ENST00000458591 KCNK10P57789 538 aa14.03□□□□□ -0.16
SCFD1-203ENST00000458591 MTPNP58546 118 aa14.03□□□□□ -0.16
SCFD1-203ENST00000458591 PPP1R8Q12972 351 aaKnown RBP14.03□□□□□ -0.16
SCFD1-203ENST00000458591 CYBRD1Q53TN4 286 aa14.03□□□□□ -0.16
SCFD1-203ENST00000458591 ANKS6Q68DC2 871 aa14.03□□□□□ -0.16
SCFD1-203ENST00000458591 SPRED1Q7Z699 444 aa14.03□□□□□ -0.16
SCFD1-203ENST00000458591 GABPB2Q8TAK5 448 aaPredicted RBP14.03□□□□□ -0.16
SCFD1-203ENST00000458591 STAG3L4Q8TBR4 150 aa14.03□□□□□ -0.16
SCFD1-203ENST00000458591 EEF1AKMT1Q8WVE0 214 aa14.03□□□□□ -0.16
SCFD1-203ENST00000458591 PPM1MQ96MI6 270 aa14.03□□□□□ -0.16
SCFD1-203ENST00000458591 RNF145Q96MT1 663 aa14.03□□□□□ -0.16
SCFD1-203ENST00000458591 PLEKHG4BQ96PX9 1271 aa14.03□□□□□ -0.16
SCFD1-203ENST00000458591 HGH1Q9BTY7 390 aa14.03□□□□□ -0.16
SCFD1-203ENST00000458591 TLR9Q9NR96 1032 aa14.03□□□□□ -0.16
SCFD1-203ENST00000458591 GID8Q9NWU2 228 aa14.03□□□□□ -0.16
SCFD1-203ENST00000458591 MARCH2Q9P0N8 246 aa14.03□□□□□ -0.16
SCFD1-203ENST00000458591 HCSTQ9UBK5 93 aa14.03□□□□□ -0.16
SCFD1-203ENST00000458591 PCDHGC4Q9Y5F7 938 aa14.03□□□□□ -0.16
SCFD1-203ENST00000458591 IGLV3-10A0A075B6K4 115 aa14.02□□□□□ -0.16
SCFD1-203ENST00000458591 A0A087WXM4 84 aa14.02□□□□□ -0.16
SCFD1-203ENST00000458591 CCDC154A6NI56 674 aa14.02□□□□□ -0.16
SCFD1-203ENST00000458591 RSL1D1O76021 490 aaKnown RBP14.02□□□□□ -0.16
SCFD1-203ENST00000458591 RASAL1O95294 804 aa14.02□□□□□ -0.16
SCFD1-203ENST00000458591 MATN4O95460 622 aa14.02□□□□□ -0.16
SCFD1-203ENST00000458591 IDO1P14902 403 aa14.02□□□□□ -0.16
SCFD1-203ENST00000458591 RFC2P35250 354 aa14.02□□□□□ -0.16
SCFD1-203ENST00000458591 DGKQP52824 942 aa14.02□□□□□ -0.16
SCFD1-203ENST00000458591 RAB39AQ14964 217 aa14.02□□□□□ -0.16
SCFD1-203ENST00000458591 C16orf72Q14CZ0 275 aa14.02□□□□□ -0.16
SCFD1-203ENST00000458591 KCTD21Q4G0X4 260 aa14.02□□□□□ -0.16
SCFD1-203ENST00000458591 ACBD5Q5T8D3 534 aaPredicted RBP14.02□□□□□ -0.16
SCFD1-203ENST00000458591 DHRS4L2Q6PKH6 230 aa14.02□□□□□ -0.16
SCFD1-203ENST00000458591 LRRC43Q8N309 656 aa14.02□□□□□ -0.16
SCFD1-203ENST00000458591 ATP6V0D2Q8N8Y2 350 aa14.02□□□□□ -0.16
SCFD1-203ENST00000458591 TNIP2Q8NFZ5 429 aa14.02□□□□□ -0.16
SCFD1-203ENST00000458591 RHEBL1Q8TAI7 183 aa14.02□□□□□ -0.16
SCFD1-203ENST00000458591 FNDC8Q8TC99 324 aa14.02□□□□□ -0.16
SCFD1-203ENST00000458591 GIPC2Q8TF65 315 aa14.02□□□□□ -0.16
SCFD1-203ENST00000458591 FBXO32Q969P5 355 aa14.02□□□□□ -0.16
SCFD1-203ENST00000458591 ZNF599Q96NL3 588 aa14.02□□□□□ -0.16
SCFD1-203ENST00000458591 POLR1BQ9H9Y6 1135 aa14.02□□□□□ -0.16
SCFD1-203ENST00000458591 CXorf21Q9HAI6 301 aa14.02□□□□□ -0.16
SCFD1-203ENST00000458591 AIG1Q9NVV5 245 aa14.02□□□□□ -0.16
SCFD1-203ENST00000458591 TUBA8Q9NY65 449 aaPredicted RBP14.02□□□□□ -0.16
SCFD1-203ENST00000458591 ZFC3H1O60293 1989 aaKnown RBP14.02□□□□□ -0.17
SCFD1-203ENST00000458591 SCAMP3O14828 347 aaKnown RBP14.02□□□□□ -0.17
SCFD1-203ENST00000458591 PRAMEF11O60813 436 aa14.02□□□□□ -0.17
SCFD1-203ENST00000458591 SLC22A3O75751 556 aa14.02□□□□□ -0.17
SCFD1-203ENST00000458591 AKR1A1P14550 325 aa14.02□□□□□ -0.17
SCFD1-203ENST00000458591 TCF3P15923 654 aa14.02□□□□□ -0.17
SCFD1-203ENST00000458591 SLC6A4P31645 630 aa14.02□□□□□ -0.17
SCFD1-203ENST00000458591 PBX3P40426 434 aa14.02□□□□□ -0.17
SCFD1-203ENST00000458591 IST1P53990 364 aa14.02□□□□□ -0.17
SCFD1-203ENST00000458591 BNIP2Q12982 314 aa14.02□□□□□ -0.17
SCFD1-203ENST00000458591 TAF1CQ15572 869 aaPredicted RBP14.02□□□□□ -0.17
SCFD1-203ENST00000458591 ZBED5Q49AG3 693 aa14.02□□□□□ -0.17
SCFD1-203ENST00000458591 FGD3Q5JSP0 725 aa14.02□□□□□ -0.17
SCFD1-203ENST00000458591 XKR5Q6UX68 686 aa14.02□□□□□ -0.17
SCFD1-203ENST00000458591 KCTD8Q6ZWB6 473 aa14.02□□□□□ -0.17
SCFD1-203ENST00000458591 ZNF554Q86TJ5 538 aa14.02□□□□□ -0.17
SCFD1-203ENST00000458591 LGI2Q8N0V4 545 aa14.02□□□□□ -0.17
SCFD1-203ENST00000458591 GPR150Q8NGU9 434 aa14.02□□□□□ -0.17
SCFD1-203ENST00000458591 BTN2A3PQ96KV6 586 aa14.02□□□□□ -0.17
SCFD1-203ENST00000458591 C9orf16Q9BUW7 83 aa14.02□□□□□ -0.17
SCFD1-203ENST00000458591 CHID1Q9BWS9 393 aa14.02□□□□□ -0.17
SCFD1-203ENST00000458591 PLGRKTQ9HBL7 147 aa14.02□□□□□ -0.17
SCFD1-203ENST00000458591 PCTPQ9UKL6 214 aa14.02□□□□□ -0.17
SCFD1-203ENST00000458591 UTS2RQ9UKP6 389 aa14.02□□□□□ -0.17
SCFD1-203ENST00000458591 PCDHB8Q9UN66 801 aa14.02□□□□□ -0.17
SCFD1-203ENST00000458591 PTPRDP23468 1912 aa14.01□□□□□ -0.17
SCFD1-203ENST00000458591 KATNA1O75449 491 aa14.01□□□□□ -0.17
SCFD1-203ENST00000458591 FGF1P05230 155 aa14.01□□□□□ -0.17
SCFD1-203ENST00000458591 HNRNPCP07910 306 aaKnown RBP eCLIP14.01□□□□□ -0.178e-7■□□□□ 9.9
SCFD1-203ENST00000458591 RPS17P08708 135 aaKnown RBP14.01□□□□□ -0.17
SCFD1-203ENST00000458591 POLR2JP52435 117 aaKnown RBP14.01□□□□□ -0.17
SCFD1-203ENST00000458591 RCAN2Q14206 197 aa14.01□□□□□ -0.17
SCFD1-203ENST00000458591 PRMT9Q6P2P2 845 aa14.01□□□□□ -0.17
SCFD1-203ENST00000458591 RSPO2Q6UXX9 243 aaPredicted RBP14.01□□□□□ -0.17
SCFD1-203ENST00000458591 Q6ZSR9 355 aa14.01□□□□□ -0.17
SCFD1-203ENST00000458591 TRIM74Q86UV6 250 aa14.01□□□□□ -0.17
SCFD1-203ENST00000458591 TRIM73Q86UV7 250 aa14.01□□□□□ -0.17
SCFD1-203ENST00000458591 ITIH5Q86UX2 942 aa14.01□□□□□ -0.17
SCFD1-203ENST00000458591 DHRSXQ8N5I4 330 aa14.01□□□□□ -0.17
SCFD1-203ENST00000458591 PACRGLQ8N7B6 248 aa14.01□□□□□ -0.17
SCFD1-203ENST00000458591 FAM86B1Q8N7N1 296 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms