RNA–Protein interactions for RNA: ENST00000458337.5

COMMD1-206, Transcript of copper metabolism domain containing 1, humanhuman

TSL 5

Gene COMMD1, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-206ENST00000458337 LRRC45Q96CN5 670 aa13.17□□□□□ -0.3
COMMD1-206ENST00000458337 NXPE2Q96DL1 559 aa13.17□□□□□ -0.3
COMMD1-206ENST00000458337 PDLIM2Q96JY6 352 aa13.17□□□□□ -0.3
COMMD1-206ENST00000458337 LRRN3Q9H3W5 708 aa13.17□□□□□ -0.3
COMMD1-206ENST00000458337 LRRC40Q9H9A6 602 aa13.17□□□□□ -0.3
COMMD1-206ENST00000458337 UGT1A7Q9HAW7 530 aa13.17□□□□□ -0.3
COMMD1-206ENST00000458337 UGT1A10Q9HAW8 530 aa13.17□□□□□ -0.3
COMMD1-206ENST00000458337 UGT1A8Q9HAW9 530 aa13.17□□□□□ -0.3
COMMD1-206ENST00000458337 ARFGAP3Q9NP61 516 aa13.17□□□□□ -0.3
COMMD1-206ENST00000458337 SMOXQ9NWM0 555 aa13.17□□□□□ -0.3
COMMD1-206ENST00000458337 ZNF148Q9UQR1 794 aa13.17□□□□□ -0.3
COMMD1-206ENST00000458337 JRKLQ9Y4A0 524 aa13.17□□□□□ -0.3
COMMD1-206ENST00000458337 KCTD3Q9Y597 815 aa13.17□□□□□ -0.3
COMMD1-206ENST00000458337 PCDHB1Q9Y5F3 818 aa13.17□□□□□ -0.3
COMMD1-206ENST00000458337 ENTPD2Q9Y5L3 495 aa13.17□□□□□ -0.3
COMMD1-206ENST00000458337 CHD6Q8TD26 2715 aa13.17□□□□□ -0.3
COMMD1-206ENST00000458337 ERI2A8K979 691 aaKnown RBP13.16□□□□□ -0.3
COMMD1-206ENST00000458337 KMOO15229 486 aa13.16□□□□□ -0.3
COMMD1-206ENST00000458337 PPM1DO15297 605 aa13.16□□□□□ -0.3
COMMD1-206ENST00000458337 LDB2O43679 373 aa13.16□□□□□ -0.3
COMMD1-206ENST00000458337 CDK14O94921 469 aa13.16□□□□□ -0.3
COMMD1-206ENST00000458337 EML2O95834 649 aa13.16□□□□□ -0.3
COMMD1-206ENST00000458337 FGGP02679 453 aa13.16□□□□□ -0.3
COMMD1-206ENST00000458337 CA5AP35218 305 aa13.16□□□□□ -0.3
COMMD1-206ENST00000458337 FDFT1P37268 417 aa13.16□□□□□ -0.3
COMMD1-206ENST00000458337 FASLGP48023 281 aa13.16□□□□□ -0.3
COMMD1-206ENST00000458337 LSSP48449 732 aa13.16□□□□□ -0.3
COMMD1-206ENST00000458337 MAZP56270 477 aaKnown RBP13.16□□□□□ -0.3
COMMD1-206ENST00000458337 ITGA9Q13797 1035 aa13.16□□□□□ -0.3
COMMD1-206ENST00000458337 CLPPQ16740 277 aaPredicted RBP13.16□□□□□ -0.3
COMMD1-206ENST00000458337 LDLRAP1Q5SW96 308 aa13.16□□□□□ -0.3
COMMD1-206ENST00000458337 SPRED1Q7Z699 444 aa13.16□□□□□ -0.3
COMMD1-206ENST00000458337 C11orf96Q7Z7L8 435 aa13.16□□□□□ -0.3
COMMD1-206ENST00000458337 CCNJLQ8IV13 435 aa13.16□□□□□ -0.3
COMMD1-206ENST00000458337 DDHD1Q8NEL9 900 aa13.16□□□□□ -0.3
COMMD1-206ENST00000458337 ZNF398Q8TD17 642 aa13.16□□□□□ -0.3
COMMD1-206ENST00000458337 PATE1Q8WXA2 126 aa13.16□□□□□ -0.3
COMMD1-206ENST00000458337 GFM1Q96RP9 751 aaKnown RBP13.16□□□□□ -0.3
COMMD1-206ENST00000458337 KCNF1Q9H3M0 494 aa13.16□□□□□ -0.3
COMMD1-206ENST00000458337 ETNK1Q9HBU6 452 aa13.16□□□□□ -0.3
COMMD1-206ENST00000458337 TBC1D29Q9UFV1 150 aa13.16□□□□□ -0.3
COMMD1-206ENST00000458337 SLC23A2Q9UGH3 650 aa13.16□□□□□ -0.3
COMMD1-206ENST00000458337 LAMA5O15230 3695 aa13.16□□□□□ -0.3
COMMD1-206ENST00000458337 A0A1W2PNU3 283 aaPredicted RBP13.15□□□□□ -0.3
COMMD1-206ENST00000458337 OR5K4A6NMS3 321 aa13.15□□□□□ -0.3
COMMD1-206ENST00000458337 TMX2-CTNND1H3BSU7 103 aa13.15□□□□□ -0.3
COMMD1-206ENST00000458337 KCNJ13O60928 360 aa13.15□□□□□ -0.3
COMMD1-206ENST00000458337 MTX2O75431 263 aa13.15□□□□□ -0.3
COMMD1-206ENST00000458337 DXOO77932 396 aaKnown RBP13.15□□□□□ -0.3
COMMD1-206ENST00000458337 SUN1O94901 812 aa13.15□□□□□ -0.3
COMMD1-206ENST00000458337 RPLP0P05388 317 aaKnown RBP13.15□□□□□ -0.3
COMMD1-206ENST00000458337 ACP5P13686 325 aa13.15□□□□□ -0.3
COMMD1-206ENST00000458337 ZNF7P17097 686 aaPredicted RBP13.15□□□□□ -0.3
COMMD1-206ENST00000458337 ZNF140P52738 457 aaPredicted RBP13.15□□□□□ -0.3
COMMD1-206ENST00000458337 PDX1P52945 283 aa13.15□□□□□ -0.3
COMMD1-206ENST00000458337 ZFP36L1Q07352 338 aaKnown RBP13.15□□□□□ -0.3
COMMD1-206ENST00000458337 SNX1Q13596 522 aa13.15□□□□□ -0.3
COMMD1-206ENST00000458337 SPIDRQ14159 915 aa13.15□□□□□ -0.3
COMMD1-206ENST00000458337 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.15□□□□□ -0.3
COMMD1-206ENST00000458337 IGF2-ASQ6U949 168 aa13.15□□□□□ -0.3
COMMD1-206ENST00000458337 FAM151BQ6UXP7 276 aa13.15□□□□□ -0.3
COMMD1-206ENST00000458337 LINC00523Q86TU6 105 aa13.15□□□□□ -0.3
COMMD1-206ENST00000458337 LRRTM4Q86VH4 590 aa13.15□□□□□ -0.3
COMMD1-206ENST00000458337 RASGEF1CQ8N431 466 aa13.15□□□□□ -0.3
COMMD1-206ENST00000458337 Q8N9G6 341 aaPredicted RBP13.15□□□□□ -0.3
COMMD1-206ENST00000458337 TIMM29Q9BSF4 260 aa13.15□□□□□ -0.3
COMMD1-206ENST00000458337 POLR1BQ9H9Y6 1135 aa13.15□□□□□ -0.3
COMMD1-206ENST00000458337 HOMER3Q9NSC5 361 aa13.15□□□□□ -0.3
COMMD1-206ENST00000458337 TTC7AQ9ULT0 858 aaPredicted RBP13.15□□□□□ -0.3
COMMD1-206ENST00000458337 KCNK6Q9Y257 313 aa13.15□□□□□ -0.3
COMMD1-206ENST00000458337 DNMT3AQ9Y6K1 912 aaPredicted RBP13.15□□□□□ -0.3
COMMD1-206ENST00000458337 AK5Q9Y6K8 562 aa13.15□□□□□ -0.3
COMMD1-206ENST00000458337 ZNF106Q9H2Y7 1883 aaKnown RBP13.14□□□□□ -0.31
COMMD1-206ENST00000458337 MROH6A6NGR9 719 aa13.14□□□□□ -0.31
COMMD1-206ENST00000458337 RHPN2P1A8MT19 583 aa13.14□□□□□ -0.31
COMMD1-206ENST00000458337 D6RAR5 112 aa13.14□□□□□ -0.31
COMMD1-206ENST00000458337 H7C0S8 307 aa13.14□□□□□ -0.31
COMMD1-206ENST00000458337 ZW10O43264 779 aa13.14□□□□□ -0.31
COMMD1-206ENST00000458337 ZSCAN12O43309 604 aa13.14□□□□□ -0.31
COMMD1-206ENST00000458337 CEP104O60308 925 aa13.14□□□□□ -0.31
COMMD1-206ENST00000458337 SRP72O76094 671 aaKnown RBP13.14□□□□□ -0.31
COMMD1-206ENST00000458337 IFNB1P01574 187 aa13.14□□□□□ -0.31
COMMD1-206ENST00000458337 F3P13726 295 aa13.14□□□□□ -0.31
COMMD1-206ENST00000458337 ETS1P14921 441 aa13.14□□□□□ -0.31
COMMD1-206ENST00000458337 TPH1P17752 444 aa13.14□□□□□ -0.31
COMMD1-206ENST00000458337 CD1CP29017 333 aa13.14□□□□□ -0.31
COMMD1-206ENST00000458337 CCKBRP32239 447 aa13.14□□□□□ -0.31
COMMD1-206ENST00000458337 CXCR5P32302 372 aa13.14□□□□□ -0.31
COMMD1-206ENST00000458337 RPL22P35268 128 aaKnown RBP13.14□□□□□ -0.31
COMMD1-206ENST00000458337 HADHAP40939 763 aa13.14□□□□□ -0.31
COMMD1-206ENST00000458337 OR1D5P58170 312 aa13.14□□□□□ -0.31
COMMD1-206ENST00000458337 SEMA5AQ13591 1074 aa13.14□□□□□ -0.31
COMMD1-206ENST00000458337 GPRC6AQ5T6X5 926 aa13.14□□□□□ -0.31
COMMD1-206ENST00000458337 C4orf22Q6V702 233 aa13.14□□□□□ -0.31
COMMD1-206ENST00000458337 WASH2PQ6VEQ5 465 aa13.14□□□□□ -0.31
COMMD1-206ENST00000458337 LSMEM2Q8N112 164 aa13.14□□□□□ -0.31
COMMD1-206ENST00000458337 RASGEF1AQ8N9B8 481 aa13.14□□□□□ -0.31
COMMD1-206ENST00000458337 GLIS1Q8NBF1 620 aa13.14□□□□□ -0.31
COMMD1-206ENST00000458337 OR13C4Q8NGS5 318 aa13.14□□□□□ -0.31
COMMD1-206ENST00000458337 SLC37A2Q8TED4 501 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms