RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 PTAFRP25105 342 aa5.41□□□□□ -1.54
VPS41-209ENST00000457055 ACRV1P26436 265 aa5.41□□□□□ -1.54
VPS41-209ENST00000457055 HLA-FP30511 346 aa5.41□□□□□ -1.54
VPS41-209ENST00000457055 MSX2P35548 267 aaPredicted RBP5.41□□□□□ -1.54
VPS41-209ENST00000457055 SLC15A1P46059 708 aa5.41□□□□□ -1.54
VPS41-209ENST00000457055 CCT3P49368 545 aaKnown RBP5.41□□□□□ -1.54
VPS41-209ENST00000457055 ARSEP51690 589 aa5.41□□□□□ -1.54
VPS41-209ENST00000457055 SLC7A2P52569 658 aa5.41□□□□□ -1.54
VPS41-209ENST00000457055 MTTPP55157 894 aa5.41□□□□□ -1.54
VPS41-209ENST00000457055 P2RX3P56373 397 aa5.41□□□□□ -1.54
VPS41-209ENST00000457055 JAM2P57087 298 aa5.41□□□□□ -1.54
VPS41-209ENST00000457055 ACTR3P61158 418 aa5.41□□□□□ -1.54
VPS41-209ENST00000457055 GUCY1A3Q02108 690 aa5.41□□□□□ -1.54
VPS41-209ENST00000457055 KLC1Q07866 573 aa5.41□□□□□ -1.54
VPS41-209ENST00000457055 TNFAIP1Q13829 316 aa5.41□□□□□ -1.54
VPS41-209ENST00000457055 KCNAB1Q14722 419 aa5.41□□□□□ -1.54
VPS41-209ENST00000457055 SLC39A14Q15043 492 aa5.41□□□□□ -1.54
VPS41-209ENST00000457055 STILQ15468 1287 aa5.41□□□□□ -1.54
VPS41-209ENST00000457055 FAM83EQ2M2I3 478 aa5.41□□□□□ -1.54
VPS41-209ENST00000457055 KRT24Q2M2I5 525 aa5.41□□□□□ -1.54
VPS41-209ENST00000457055 PGS1Q32NB8 556 aa5.41□□□□□ -1.54
VPS41-209ENST00000457055 UAP1L1Q3KQV9 507 aa5.41□□□□□ -1.54
VPS41-209ENST00000457055 TMEM31Q5JXX7 168 aa5.41□□□□□ -1.54
VPS41-209ENST00000457055 FAM69AQ5T7M9 428 aa5.41□□□□□ -1.54
VPS41-209ENST00000457055 WLSQ5T9L3 541 aa5.41□□□□□ -1.54
VPS41-209ENST00000457055 C6orf163Q5TEZ5 329 aa5.41□□□□□ -1.54
VPS41-209ENST00000457055 KRT40Q6A162 431 aa5.41□□□□□ -1.54
VPS41-209ENST00000457055 GRAMD4Q6IC98 578 aa5.41□□□□□ -1.54
VPS41-209ENST00000457055 ZNF425Q6IV72 752 aa5.41□□□□□ -1.54
VPS41-209ENST00000457055 DPY19L2P1Q6NXN4 242 aa5.41□□□□□ -1.54
VPS41-209ENST00000457055 TTC23LQ6PF05 361 aa5.41□□□□□ -1.54
VPS41-209ENST00000457055 TMEM270Q6UE05 265 aa5.41□□□□□ -1.54
VPS41-209ENST00000457055 CYP20A1Q6UW02 462 aa5.41□□□□□ -1.54
VPS41-209ENST00000457055 USP30Q70CQ3 517 aa5.41□□□□□ -1.54
VPS41-209ENST00000457055 VASH2Q86V25 355 aa5.41□□□□□ -1.54
VPS41-209ENST00000457055 SIX6OS1Q8N1H7 587 aa5.41□□□□□ -1.54
VPS41-209ENST00000457055 TBC1D19Q8N5T2 526 aa5.41□□□□□ -1.54
VPS41-209ENST00000457055 RNF152Q8N8N0 203 aa5.41□□□□□ -1.54
VPS41-209ENST00000457055 TRPV3Q8NET8 790 aa5.41□□□□□ -1.54
VPS41-209ENST00000457055 TMIEQ8NEW7 156 aa5.41□□□□□ -1.54
VPS41-209ENST00000457055 SPATA4Q8NEY3 305 aa5.41□□□□□ -1.54
VPS41-209ENST00000457055 CMASQ8NFW8 434 aaPredicted RBP5.41□□□□□ -1.54
VPS41-209ENST00000457055 GPR150Q8NGU9 434 aa5.41□□□□□ -1.54
VPS41-209ENST00000457055 WDR48Q8TAF3 677 aa5.41□□□□□ -1.54
VPS41-209ENST00000457055 KLHDC4Q8TBB5 520 aa5.41□□□□□ -1.54
VPS41-209ENST00000457055 STT3BQ8TCJ2 826 aa5.41□□□□□ -1.54
VPS41-209ENST00000457055 CFHR4Q92496 578 aa5.41□□□□□ -1.54
VPS41-209ENST00000457055 PIGKQ92643 395 aa5.41□□□□□ -1.54
VPS41-209ENST00000457055 DPF2Q92785 391 aa5.41□□□□□ -1.54
VPS41-209ENST00000457055 SLC5A5Q92911 643 aa5.41□□□□□ -1.54
VPS41-209ENST00000457055 FAM122AQ96E09 287 aa5.41□□□□□ -1.54
VPS41-209ENST00000457055 OR1F2PQ96R84 312 aa5.41□□□□□ -1.54
VPS41-209ENST00000457055 GAL3ST4Q96RP7 486 aa5.41□□□□□ -1.54
VPS41-209ENST00000457055 HEMGNQ9BXL5 484 aa5.41□□□□□ -1.54
VPS41-209ENST00000457055 C6orf62Q9GZU0 229 aaPredicted RBP5.41□□□□□ -1.54
VPS41-209ENST00000457055 HDHD2Q9H0R4 259 aa5.41□□□□□ -1.54
VPS41-209ENST00000457055 TPK1Q9H3S4 243 aa5.41□□□□□ -1.54
VPS41-209ENST00000457055 ZSCAN16Q9H4T2 348 aaPredicted RBP5.41□□□□□ -1.54
VPS41-209ENST00000457055 TRIM45Q9H8W5 580 aaPredicted RBP5.41□□□□□ -1.54
VPS41-209ENST00000457055 MSL2Q9HCI7 577 aa5.41□□□□□ -1.54
VPS41-209ENST00000457055 BTBD7Q9P203 1132 aa5.41□□□□□ -1.54
VPS41-209ENST00000457055 LYVE1Q9Y5Y7 322 aa5.41□□□□□ -1.54
VPS41-209ENST00000457055 CACNG2Q9Y698 323 aa5.41□□□□□ -1.54
VPS41-209ENST00000457055 HFM1A2PYH4 1435 aa5.4□□□□□ -1.54
VPS41-209ENST00000457055 MYOM3Q5VTT5 1437 aa5.4□□□□□ -1.54
VPS41-209ENST00000457055 A0A1B0GTQ1 180 aa5.4□□□□□ -1.54
VPS41-209ENST00000457055 A0A1W2PQ09 198 aa5.4□□□□□ -1.54
VPS41-209ENST00000457055 LOC390937A0A1W2PQ73 354 aa5.4□□□□□ -1.54
VPS41-209ENST00000457055 HMX3A6NHT5 357 aa5.4□□□□□ -1.54
VPS41-209ENST00000457055 SLC15A5A6NIM6 579 aa5.4□□□□□ -1.54
VPS41-209ENST00000457055 AQP12BA6NM10 295 aa5.4□□□□□ -1.54
VPS41-209ENST00000457055 ZNF561-AS1K7EIQ3 104 aa5.4□□□□□ -1.54
VPS41-209ENST00000457055 CBX4O00257 560 aa5.4□□□□□ -1.54
VPS41-209ENST00000457055 BTN3A1O00481 513 aa5.4□□□□□ -1.54
VPS41-209ENST00000457055 KCNK3O14649 394 aa5.4□□□□□ -1.54
VPS41-209ENST00000457055 ZNF197O14709 1029 aa5.4□□□□□ -1.54
VPS41-209ENST00000457055 GSTA4O15217 222 aa5.4□□□□□ -1.54
VPS41-209ENST00000457055 KCNN4O15554 427 aa5.4□□□□□ -1.54
VPS41-209ENST00000457055 ECE2O60344 883 aa5.4□□□□□ -1.54
VPS41-209ENST00000457055 TRIM3O75382 744 aaPredicted RBP5.4□□□□□ -1.54
VPS41-209ENST00000457055 MFN2O95140 757 aa5.4□□□□□ -1.54
VPS41-209ENST00000457055 PCDH8O95206 1070 aa5.4□□□□□ -1.54
VPS41-209ENST00000457055 BMP10O95393 424 aa5.4□□□□□ -1.54
VPS41-209ENST00000457055 PIGNO95427 931 aa5.4□□□□□ -1.54
VPS41-209ENST00000457055 PTBP3O95758 552 aaKnown RBP5.4□□□□□ -1.54
VPS41-209ENST00000457055 ASS1P00966 412 aaKnown RBP5.4□□□□□ -1.54
VPS41-209ENST00000457055 APOA1P02647 267 aa5.4□□□□□ -1.54
VPS41-209ENST00000457055 C4BPAP04003 597 aaKnown RBP5.4□□□□□ -1.54
VPS41-209ENST00000457055 A1BGP04217 495 aa5.4□□□□□ -1.54
VPS41-209ENST00000457055 ALDH2P05091 517 aa5.4□□□□□ -1.54
VPS41-209ENST00000457055 MMP2P08253 660 aa5.4□□□□□ -1.54
VPS41-209ENST00000457055 DARSP14868 501 aaKnown RBP5.4□□□□□ -1.54
VPS41-209ENST00000457055 RXRAP19793 462 aa5.4□□□□□ -1.54
VPS41-209ENST00000457055 CD1BP29016 333 aa5.4□□□□□ -1.54
VPS41-209ENST00000457055 HMOX2P30519 316 aa5.4□□□□□ -1.54
VPS41-209ENST00000457055 PSMB10P40306 273 aa5.4□□□□□ -1.54
VPS41-209ENST00000457055 PTGER3P43115 390 aa5.4□□□□□ -1.54
VPS41-209ENST00000457055 CDKN1BP46527 198 aa5.4□□□□□ -1.54
VPS41-209ENST00000457055 GABRB2P47870 512 aa5.4□□□□□ -1.54
VPS41-209ENST00000457055 MEOX1P50221 254 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms