RNA–Protein interactions for RNA: ENST00000456563.1

FAM239A-203, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 3

Gene FAM239A, Length 793 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-203ENST00000456563 TSACCQ96A04 125 aaPredicted RBP17.68■□□□□ 0.42
FAM239A-203ENST00000456563 PDXPQ96GD0 296 aa17.68■□□□□ 0.42
FAM239A-203ENST00000456563 FMO2Q99518 471 aa17.68■□□□□ 0.42
FAM239A-203ENST00000456563 ZCCHC2Q9C0B9 1178 aaKnown RBP17.68■□□□□ 0.42
FAM239A-203ENST00000456563 RMI1Q9H9A7 625 aa17.68■□□□□ 0.42
FAM239A-203ENST00000456563 ARFGAP3Q9NP61 516 aa17.68■□□□□ 0.42
FAM239A-203ENST00000456563 RRAGDQ9NQL2 400 aaPredicted RBP17.68■□□□□ 0.42
FAM239A-203ENST00000456563 DNAJC28Q9NX36 388 aa17.68■□□□□ 0.42
FAM239A-203ENST00000456563 ATXN10Q9UBB4 475 aa17.68■□□□□ 0.42
FAM239A-203ENST00000456563 KLF15Q9UIH9 416 aa17.68■□□□□ 0.42
FAM239A-203ENST00000456563 MYO15AQ9UKN7 3530 aa17.68■□□□□ 0.42
FAM239A-203ENST00000456563 DMDP11532 3685 aa17.68■□□□□ 0.42
FAM239A-203ENST00000456563 A0A1B0GTQ1 180 aa17.67■□□□□ 0.42
FAM239A-203ENST00000456563 CD3EAPO15446 510 aaKnown RBP17.67■□□□□ 0.42
FAM239A-203ENST00000456563 YKT6O15498 198 aa17.67■□□□□ 0.42
FAM239A-203ENST00000456563 NUAK1O60285 661 aa17.67■□□□□ 0.42
FAM239A-203ENST00000456563 GFRA3O60609 400 aa17.67■□□□□ 0.42
FAM239A-203ENST00000456563 MTX2O75431 263 aa17.67■□□□□ 0.42
FAM239A-203ENST00000456563 CDK14O94921 469 aa17.67■□□□□ 0.42
FAM239A-203ENST00000456563 TNFP01375 233 aa17.67■□□□□ 0.42
FAM239A-203ENST00000456563 MAGEA4P43358 317 aa17.67■□□□□ 0.42
FAM239A-203ENST00000456563 ARRB1P49407 418 aaPredicted RBP17.67■□□□□ 0.42
FAM239A-203ENST00000456563 ATXN3P54252 364 aaPredicted RBP17.67■□□□□ 0.42
FAM239A-203ENST00000456563 HNRNPKP61978 463 aaKnown RBP eCLIP17.67■□□□□ 0.42
FAM239A-203ENST00000456563 ITIH4Q14624 930 aa17.67■□□□□ 0.42
FAM239A-203ENST00000456563 SHBQ15464 509 aa17.67■□□□□ 0.42
FAM239A-203ENST00000456563 DBN1Q16643 649 aa17.67■□□□□ 0.42
FAM239A-203ENST00000456563 AARS2Q5JTZ9 985 aaKnown RBP17.67■□□□□ 0.42
FAM239A-203ENST00000456563 PRAMEF14Q5SWL7 426 aa17.67■□□□□ 0.42
FAM239A-203ENST00000456563 ZNF648Q5T619 568 aaPredicted RBP17.67■□□□□ 0.42
FAM239A-203ENST00000456563 KCTD16Q68DU8 428 aa17.67■□□□□ 0.42
FAM239A-203ENST00000456563 CCDC25Q86WR0 208 aa17.67■□□□□ 0.42
FAM239A-203ENST00000456563 RELL1Q8IUW5 271 aa17.67■□□□□ 0.42
FAM239A-203ENST00000456563 LMNTD2Q8IXW0 634 aa17.67■□□□□ 0.42
FAM239A-203ENST00000456563 PHACTR4Q8IZ21 702 aa17.67■□□□□ 0.42
FAM239A-203ENST00000456563 MINDY1Q8N5J2 469 aa17.67■□□□□ 0.42
FAM239A-203ENST00000456563 CFAP36Q96G28 342 aa17.67■□□□□ 0.42
FAM239A-203ENST00000456563 TTC1Q99614 292 aa17.67■□□□□ 0.42
FAM239A-203ENST00000456563 COPS8Q99627 209 aa17.67■□□□□ 0.42
FAM239A-203ENST00000456563 GTPBP2Q9BX10 602 aaKnown RBP17.67■□□□□ 0.42
FAM239A-203ENST00000456563 OR2AG1Q9H205 316 aa17.67■□□□□ 0.42
FAM239A-203ENST00000456563 ANKZF1Q9H8Y5 726 aa17.67■□□□□ 0.42
FAM239A-203ENST00000456563 IL21RQ9HBE5 538 aa17.67■□□□□ 0.42
FAM239A-203ENST00000456563 CYP4F12Q9HCS2 524 aa17.67■□□□□ 0.42
FAM239A-203ENST00000456563 MRPL40Q9NQ50 206 aaKnown RBP17.67■□□□□ 0.42
FAM239A-203ENST00000456563 MARCH4Q9P2E8 410 aaPredicted RBP17.67■□□□□ 0.42
FAM239A-203ENST00000456563 NFU1Q9UMS0 254 aa17.67■□□□□ 0.42
FAM239A-203ENST00000456563 H3BM21 787 aa17.66■□□□□ 0.42
FAM239A-203ENST00000456563 CDX4O14627 284 aaPredicted RBP17.66■□□□□ 0.42
FAM239A-203ENST00000456563 CHUKO15111 745 aa17.66■□□□□ 0.42
FAM239A-203ENST00000456563 DNAJC6O75061 913 aa17.66■□□□□ 0.42
FAM239A-203ENST00000456563 ZNF883P0CG24 379 aa17.66■□□□□ 0.42
FAM239A-203ENST00000456563 ZNF8P17098 575 aaPredicted RBP17.66■□□□□ 0.42
FAM239A-203ENST00000456563 JUNDP17535 347 aa17.66■□□□□ 0.42
FAM239A-203ENST00000456563 MSH3P20585 1137 aa17.66■□□□□ 0.42
FAM239A-203ENST00000456563 OGNP20774 298 aaKnown RBP17.66■□□□□ 0.42
FAM239A-203ENST00000456563 TNFRSF8P28908 595 aa17.66■□□□□ 0.42
FAM239A-203ENST00000456563 PPARGP37231 505 aaPredicted RBP17.66■□□□□ 0.42
FAM239A-203ENST00000456563 B4GALNT1Q00973 533 aa17.66■□□□□ 0.42
FAM239A-203ENST00000456563 THOC5Q13769 683 aaKnown RBP17.66■□□□□ 0.42
FAM239A-203ENST00000456563 SEMA3AQ14563 771 aa17.66■□□□□ 0.42
FAM239A-203ENST00000456563 ZNF542PQ5EBM4 170 aa17.66■□□□□ 0.42
FAM239A-203ENST00000456563 MRNIPQ6NTE8 343 aa17.66■□□□□ 0.42
FAM239A-203ENST00000456563 NEPROQ6NW34 567 aa17.66■□□□□ 0.42
FAM239A-203ENST00000456563 HID1Q8IV36 788 aa17.66■□□□□ 0.42
FAM239A-203ENST00000456563 PALM2Q8IXS6 379 aa17.66■□□□□ 0.42
FAM239A-203ENST00000456563 CALML6Q8TD86 181 aa17.66■□□□□ 0.42
FAM239A-203ENST00000456563 SCG3Q8WXD2 468 aaKnown RBP17.66■□□□□ 0.42
FAM239A-203ENST00000456563 UBXN4Q92575 508 aa17.66■□□□□ 0.42
FAM239A-203ENST00000456563 TTC25Q96NG3 672 aa17.66■□□□□ 0.42
FAM239A-203ENST00000456563 EDEM2Q9BV94 578 aa17.66■□□□□ 0.42
FAM239A-203ENST00000456563 SLC13A1Q9BZW2 595 aa17.66■□□□□ 0.42
FAM239A-203ENST00000456563 CARS2Q9HA77 564 aaKnown RBP17.66■□□□□ 0.42
FAM239A-203ENST00000456563 C20orf96Q9NUD7 363 aaPredicted RBP17.66■□□□□ 0.42
FAM239A-203ENST00000456563 DNAAF2Q9NVR5 837 aaKnown RBP17.66■□□□□ 0.42
FAM239A-203ENST00000456563 MOSPD1Q9UJG1 213 aa17.66■□□□□ 0.42
FAM239A-203ENST00000456563 SUFUQ9UMX1 484 aa17.66■□□□□ 0.42
FAM239A-203ENST00000456563 RALGAPA1Q6GYQ0 2036 aa17.65■□□□□ 0.42
FAM239A-203ENST00000456563 CFAP99D6REC4 459 aa17.65■□□□□ 0.42
FAM239A-203ENST00000456563 GOLGA8KD6RF30 607 aa17.65■□□□□ 0.42
FAM239A-203ENST00000456563 GOLGA8TH3BQL2 631 aa17.65■□□□□ 0.42
FAM239A-203ENST00000456563 GSTA2P09210 222 aa17.65■□□□□ 0.42
FAM239A-203ENST00000456563 RALBP11234 206 aa17.65■□□□□ 0.42
FAM239A-203ENST00000456563 AKT1P31749 480 aa17.65■□□□□ 0.42
FAM239A-203ENST00000456563 TTPAP49638 278 aa17.65■□□□□ 0.42
FAM239A-203ENST00000456563 CCT8P50990 548 aa17.65■□□□□ 0.42
FAM239A-203ENST00000456563 GTF2H3Q13889 308 aa17.65■□□□□ 0.42
FAM239A-203ENST00000456563 TYSND1Q2T9J0 566 aa17.65■□□□□ 0.42
FAM239A-203ENST00000456563 AASDHQ4L235 1098 aaPredicted RBP17.65■□□□□ 0.42
FAM239A-203ENST00000456563 PYCR3Q53H96 274 aa17.65■□□□□ 0.42
FAM239A-203ENST00000456563 PACS1Q6VY07 963 aa17.65■□□□□ 0.42
FAM239A-203ENST00000456563 MARK2Q7KZI7 788 aaKnown RBP17.65■□□□□ 0.42
FAM239A-203ENST00000456563 RD3Q7Z3Z2 195 aa17.65■□□□□ 0.42
FAM239A-203ENST00000456563 SDCCAG8Q86SQ7 713 aaPredicted RBP17.65■□□□□ 0.42
FAM239A-203ENST00000456563 KCNMB4Q86W47 210 aa17.65■□□□□ 0.42
FAM239A-203ENST00000456563 UNC5BQ8IZJ1 945 aa17.65■□□□□ 0.42
FAM239A-203ENST00000456563 RBFAQ8N0V3 343 aa17.65■□□□□ 0.42
FAM239A-203ENST00000456563 RASGEF1AQ8N9B8 481 aa17.65■□□□□ 0.42
FAM239A-203ENST00000456563 OR2I1PQ8NGU4 316 aa17.65■□□□□ 0.42
FAM239A-203ENST00000456563 GSDMBQ8TAX9 411 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms