RNA–Protein interactions for RNA: ENST00000456235.1

LINC01563-201, Transcript of long intergenic non-protein coding RNA 1563, humanhuman

TSL 2 BASIC

Gene LINC01563, Length 750 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01563-201ENST00000456235 HS1BP3Q53T59 392 aa13.9□□□□□ -0.18
LINC01563-201ENST00000456235 PERM1Q5SV97 790 aa13.9□□□□□ -0.18
LINC01563-201ENST00000456235 C6orf132Q5T0Z8 1188 aa13.9□□□□□ -0.18
LINC01563-201ENST00000456235 IZUMO3Q5VZ72 239 aa13.9□□□□□ -0.18
LINC01563-201ENST00000456235 TAS2R42Q7RTR8 314 aa13.9□□□□□ -0.18
LINC01563-201ENST00000456235 EFL1Q7Z2Z2 1120 aaKnown RBP13.9□□□□□ -0.18
LINC01563-201ENST00000456235 LDB1Q86U70 411 aaPredicted RBP13.9□□□□□ -0.18
LINC01563-201ENST00000456235 NLRP8Q86W28 1048 aa13.9□□□□□ -0.18
LINC01563-201ENST00000456235 GKN2Q86XP6 184 aa13.9□□□□□ -0.18
LINC01563-201ENST00000456235 JAMLQ86YT9 394 aa13.9□□□□□ -0.18
LINC01563-201ENST00000456235 TRAPPC5Q8IUR0 188 aa13.9□□□□□ -0.18
LINC01563-201ENST00000456235 ZNF547Q8IVP9 402 aa13.9□□□□□ -0.18
LINC01563-201ENST00000456235 CHCHD4Q8N4Q1 142 aa13.9□□□□□ -0.18
LINC01563-201ENST00000456235 RASGEF1AQ8N9B8 481 aa13.9□□□□□ -0.18
LINC01563-201ENST00000456235 OR13J1Q8NGT2 312 aa13.9□□□□□ -0.18
LINC01563-201ENST00000456235 ZNF398Q8TD17 642 aa13.9□□□□□ -0.18
LINC01563-201ENST00000456235 GRK7Q8WTQ7 553 aa13.9□□□□□ -0.18
LINC01563-201ENST00000456235 CDC6Q99741 560 aa13.9□□□□□ -0.18
LINC01563-201ENST00000456235 BOCQ9BWV1 1114 aa13.9□□□□□ -0.18
LINC01563-201ENST00000456235 CDH19Q9H159 772 aa13.9□□□□□ -0.18
LINC01563-201ENST00000456235 DPEP2Q9H4A9 486 aa13.9□□□□□ -0.18
LINC01563-201ENST00000456235 OSGEPL1Q9H4B0 414 aa13.9□□□□□ -0.18
LINC01563-201ENST00000456235 NLE1Q9NVX2 485 aaPredicted RBP13.9□□□□□ -0.18
LINC01563-201ENST00000456235 TAAR2Q9P1P5 351 aa13.9□□□□□ -0.18
LINC01563-201ENST00000456235 SLC23A2Q9UGH3 650 aa13.9□□□□□ -0.18
LINC01563-201ENST00000456235 TCAF1Q9Y4C2 921 aa13.9□□□□□ -0.18
LINC01563-201ENST00000456235 COL27A1Q8IZC6 1860 aaPredicted RBP13.9□□□□□ -0.18
LINC01563-201ENST00000456235 ARHGEF17Q96PE2 2063 aaPredicted RBP13.9□□□□□ -0.18
LINC01563-201ENST00000456235 CNOT1A5YKK6 2376 aaKnown RBP13.9□□□□□ -0.18
LINC01563-201ENST00000456235 PCNX2A6NKB5 2137 aa13.9□□□□□ -0.18
LINC01563-201ENST00000456235 MROH6A6NGR9 719 aa13.89□□□□□ -0.19
LINC01563-201ENST00000456235 GOLGA8KD6RF30 607 aa13.89□□□□□ -0.19
LINC01563-201ENST00000456235 GOLGA8TH3BQL2 631 aa13.89□□□□□ -0.19
LINC01563-201ENST00000456235 AGRPO00253 132 aa13.89□□□□□ -0.19
LINC01563-201ENST00000456235 NUAK1O60285 661 aa13.89□□□□□ -0.19
LINC01563-201ENST00000456235 URI1O94763 535 aaPredicted RBP13.89□□□□□ -0.19
LINC01563-201ENST00000456235 CDK14O94921 469 aa13.89□□□□□ -0.19
LINC01563-201ENST00000456235 NMBRP28336 390 aa13.89□□□□□ -0.19
LINC01563-201ENST00000456235 B4GALNT1Q00973 533 aa13.89□□□□□ -0.19
LINC01563-201ENST00000456235 ILF3Q12906 894 aaKnown RBP eCLIP13.89□□□□□ -0.19
LINC01563-201ENST00000456235 NFATC2Q13469 925 aa13.89□□□□□ -0.19
LINC01563-201ENST00000456235 SEMA3AQ14563 771 aa13.89□□□□□ -0.19
LINC01563-201ENST00000456235 INSCQ1MX18 579 aa13.89□□□□□ -0.19
LINC01563-201ENST00000456235 HP1BP3Q5SSJ5 553 aaPredicted RBP13.89□□□□□ -0.19
LINC01563-201ENST00000456235 TSTD2Q5T7W7 516 aa13.89□□□□□ -0.19
LINC01563-201ENST00000456235 ZCCHC8Q6NZY4 707 aaKnown RBP13.89□□□□□ -0.19
LINC01563-201ENST00000456235 CAND1Q86VP6 1230 aaKnown RBP13.89□□□□□ -0.19
LINC01563-201ENST00000456235 ZNF761Q86XN6 746 aaPredicted RBP13.89□□□□□ -0.19
LINC01563-201ENST00000456235 PIANPQ8IYJ0 282 aa13.89□□□□□ -0.19
LINC01563-201ENST00000456235 AGGF1Q8N302 714 aaeCLIP13.89□□□□□ -0.19
LINC01563-201ENST00000456235 IFI44Q8TCB0 444 aa13.89□□□□□ -0.19
LINC01563-201ENST00000456235 CDKN2AIPNLQ96HQ2 116 aa13.89□□□□□ -0.19
LINC01563-201ENST00000456235 VPS35Q96QK1 796 aa13.89□□□□□ -0.19
LINC01563-201ENST00000456235 GSDMCQ9BYG8 508 aa13.89□□□□□ -0.19
LINC01563-201ENST00000456235 TRIM39Q9HCM9 518 aa13.89□□□□□ -0.19
LINC01563-201ENST00000456235 KLC4Q9NSK0 619 aa13.89□□□□□ -0.19
LINC01563-201ENST00000456235 FEZ2Q9UHY8 353 aaPredicted RBP13.89□□□□□ -0.19
LINC01563-201ENST00000456235 RABGEF1Q9UJ41 708 aa13.89□□□□□ -0.19
LINC01563-201ENST00000456235 KLK13Q9UKR3 277 aa13.89□□□□□ -0.19
LINC01563-201ENST00000456235 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.88□□□□□ -0.19
LINC01563-201ENST00000456235 HEATR9A2RTY3 570 aa13.88□□□□□ -0.19
LINC01563-201ENST00000456235 NOBOXO60393 691 aa13.88□□□□□ -0.19
LINC01563-201ENST00000456235 RFPL3O75679 317 aa13.88□□□□□ -0.19
LINC01563-201ENST00000456235 GOT2P00505 430 aaKnown RBP13.88□□□□□ -0.19
LINC01563-201ENST00000456235 CKMT2P17540 419 aa13.88□□□□□ -0.19
LINC01563-201ENST00000456235 MSH3P20585 1137 aa13.88□□□□□ -0.19
LINC01563-201ENST00000456235 ITGALP20701 1170 aa13.88□□□□□ -0.19
LINC01563-201ENST00000456235 TMEM115Q12893 351 aaPredicted RBP13.88□□□□□ -0.19
LINC01563-201ENST00000456235 ITGA9Q13797 1035 aa13.88□□□□□ -0.19
LINC01563-201ENST00000456235 GTF2H3Q13889 308 aa13.88□□□□□ -0.19
LINC01563-201ENST00000456235 NR0B2Q15466 257 aa13.88□□□□□ -0.19
LINC01563-201ENST00000456235 FNBP1LQ5T0N5 605 aa13.88□□□□□ -0.19
LINC01563-201ENST00000456235 RNASEH2BQ5TBB1 312 aaKnown RBP13.88□□□□□ -0.19
LINC01563-201ENST00000456235 PDPK2PQ6A1A2 396 aa13.88□□□□□ -0.19
LINC01563-201ENST00000456235 CASC4Q6P4E1 433 aa13.88□□□□□ -0.19
LINC01563-201ENST00000456235 LRRC8BQ6P9F7 803 aa13.88□□□□□ -0.19
LINC01563-201ENST00000456235 RAVER1Q8IY67 606 aaKnown RBP13.88□□□□□ -0.19
LINC01563-201ENST00000456235 ARL10Q8N8L6 244 aa13.88□□□□□ -0.19
LINC01563-201ENST00000456235 Q8N9G6 341 aaPredicted RBP13.88□□□□□ -0.19
LINC01563-201ENST00000456235 DDHD1Q8NEL9 900 aa13.88□□□□□ -0.19
LINC01563-201ENST00000456235 GPBAR1Q8TDU6 330 aa13.88□□□□□ -0.19
LINC01563-201ENST00000456235 ZDHHC1Q8WTX9 485 aa13.88□□□□□ -0.19
LINC01563-201ENST00000456235 HDAC10Q969S8 669 aa13.88□□□□□ -0.19
LINC01563-201ENST00000456235 CCDC74AQ96AQ1 378 aa13.88□□□□□ -0.19
LINC01563-201ENST00000456235 SGF29Q96ES7 293 aa13.88□□□□□ -0.19
LINC01563-201ENST00000456235 SCARF2Q96GP6 870 aaPredicted RBP13.88□□□□□ -0.19
LINC01563-201ENST00000456235 SERPINB12Q96P63 405 aa13.88□□□□□ -0.19
LINC01563-201ENST00000456235 DPH5Q9H2P9 285 aa13.88□□□□□ -0.19
LINC01563-201ENST00000456235 PRDM8Q9NQV8 689 aa13.88□□□□□ -0.19
LINC01563-201ENST00000456235 VPS18Q9P253 973 aa13.88□□□□□ -0.19
LINC01563-201ENST00000456235 MARCH4Q9P2E8 410 aaPredicted RBP13.88□□□□□ -0.19
LINC01563-201ENST00000456235 PCYOX1Q9UHG3 505 aa13.88□□□□□ -0.19
LINC01563-201ENST00000456235 CSNK1G3Q9Y6M4 447 aa13.88□□□□□ -0.19
LINC01563-201ENST00000456235 SLC30A1Q9Y6M5 507 aa13.88□□□□□ -0.19
LINC01563-201ENST00000456235 DNALI1O14645 258 aaPredicted RBP13.87□□□□□ -0.19
LINC01563-201ENST00000456235 RAD51CO43502 376 aa13.87□□□□□ -0.19
LINC01563-201ENST00000456235 CKMT1AP12532 417 aa13.87□□□□□ -0.19
LINC01563-201ENST00000456235 ADRA1DP25100 572 aa13.87□□□□□ -0.19
LINC01563-201ENST00000456235 FOXN2P32314 431 aa13.87□□□□□ -0.19
LINC01563-201ENST00000456235 HADHAP40939 763 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms