RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 HCFC1R1Q9NWW0 138 aa5.25□□□□□ -1.57
HMGB1P4-201ENST00000455362 COMMD8Q9NX08 183 aa5.25□□□□□ -1.57
HMGB1P4-201ENST00000455362 SMARCAL1Q9NZC9 954 aa5.25□□□□□ -1.57
HMGB1P4-201ENST00000455362 DTLQ9NZJ0 730 aa5.25□□□□□ -1.57
HMGB1P4-201ENST00000455362 EHD2Q9NZN4 543 aa5.25□□□□□ -1.57
HMGB1P4-201ENST00000455362 HSFX1Q9UBD0 423 aa5.25□□□□□ -1.57
HMGB1P4-201ENST00000455362 SAE1Q9UBE0 346 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P4-201ENST00000455362 PCSK1NQ9UHG2 260 aa5.25□□□□□ -1.57
HMGB1P4-201ENST00000455362 MAFFQ9ULX9 164 aa5.25□□□□□ -1.57
HMGB1P4-201ENST00000455362 SCML2Q9UQR0 700 aa5.25□□□□□ -1.57
HMGB1P4-201ENST00000455362 SSX2IPQ9Y2D8 614 aa5.25□□□□□ -1.57
HMGB1P4-201ENST00000455362 ACTL7AQ9Y615 435 aa5.25□□□□□ -1.57
HMGB1P4-201ENST00000455362 PLXNA3P51805 1871 aa5.25□□□□□ -1.57
HMGB1P4-201ENST00000455362 LAMA3Q16787 3333 aa5.25□□□□□ -1.57
HMGB1P4-201ENST00000455362 BRWD1Q9NSI6 2320 aa5.25□□□□□ -1.57
HMGB1P4-201ENST00000455362 ANAPC1Q9H1A4 1944 aa5.25□□□□□ -1.57
HMGB1P4-201ENST00000455362 MYO16Q9Y6X6 1858 aa5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 TCRBV7S2A1N4TA0A589 114 aa5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 C3orf70A6NLC5 250 aaPredicted RBP5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 SLC38A8A6NNN8 435 aa5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 C5orf67F2Z3F1 127 aa5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 PI4K2BG5E9Z4 385 aa5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 PGRMC1O00264 195 aaKnown RBP5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 UBE2CO00762 179 aa5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 CAPN9O14815 690 aa5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 GRM6O15303 877 aa5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 TEX28O15482 410 aa5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 DYRK3O43781 588 aa5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 PRPSAP2O60256 369 aa5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 CCNT2O60583 730 aaKnown RBP5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 VIPP01282 170 aa5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 FGGP02679 453 aa5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 MT-ND3P03897 115 aa5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 KDELR1P24390 212 aa5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 DNAJB1P25685 340 aa5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 YWHAQP27348 245 aa5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 EEF1DP29692 281 aaKnown RBP5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 GCH1P30793 250 aa5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 HPDP32754 393 aaPredicted RBP5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 CTNNB1P35222 781 aa5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 PTPN7P35236 360 aa5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 ARSEP51690 589 aa5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 YWHAGP61981 247 aaKnown RBP eCLIP5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 TUBB4BP68371 445 aa5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 PITX1P78337 314 aaPredicted RBP5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 CHRNEQ04844 493 aa5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 CAMK1Q14012 370 aa5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 PUM1Q14671 1186 aaKnown RBP eCLIP5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 TAZQ16635 292 aa5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 CDO1Q16878 200 aa5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 MGAT5BQ3V5L5 792 aa5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 ZNF362Q5T0B9 420 aaPredicted RBP5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 OTUD1Q5VV17 481 aaPredicted RBP5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 KAZNQ674X7 775 aa5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 VASNQ6EMK4 673 aa5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 SCYL2Q6P3W7 929 aa5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 CYP20A1Q6UW02 462 aa5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 ZDHHC24Q6UX98 284 aa5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 MFSD7Q6UXD7 560 aa5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 PRR23CQ6ZRP0 262 aa5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 DENND5BQ6ZUT9 1274 aa5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 STRADAQ7RTN6 431 aa5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 SPRED2Q7Z698 418 aa5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 MON1AQ86VX9 555 aa5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 SLC13A5Q86YT5 568 aaPredicted RBP5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 SPPL2CQ8IUH8 684 aa5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 UNC5BQ8IZJ1 945 aa5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 ZDHHC14Q8IZN3 488 aa5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 MMGT1Q8N4V1 131 aa5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 MRPL43Q8N983 215 aaKnown RBP5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 NOA1Q8NC60 698 aaKnown RBP5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 NFKBIDQ8NI38 313 aa5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 TEKT4Q8WW24 435 aa5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 CASKIN2Q8WXE0 1202 aa5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 RAPGEF5Q92565 580 aa5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 PGAP3Q96FM1 320 aaPredicted RBP5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 RPGRIP1Q96KN7 1286 aa5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 WDR92Q96MX6 357 aa5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 SLITRK1Q96PX8 696 aa5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 PEBP4Q96S96 227 aa5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 NAP1L3Q99457 506 aaPredicted RBP5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 SEPT5Q99719 369 aaPredicted RBP5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 C17orf80Q9BSJ5 609 aa5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 G6PC3Q9BUM1 346 aa5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 TRIM62Q9BVG3 475 aa5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 SSBP4Q9BWG4 385 aaPredicted RBP5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 CPEB1Q9BZB8 566 aaKnown RBP5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 NELFAQ9H3P2 528 aa5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 FBXO44Q9H4M3 255 aa5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 ERVMER34-1Q9H9K5 563 aa5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 NMUR1Q9HB89 426 aa5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 CYP4F11Q9HBI6 524 aa5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 ABCC13Q9NSE7 274 aa5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 TRPS1Q9UHF7 1281 aa5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 TBC1D30Q9Y2I9 924 aa5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 NR2E1Q9Y466 385 aa5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 IRAK3Q9Y616 596 aa5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 DENND4CQ5VZ89 1909 aa5.24□□□□□ -1.57
HMGB1P4-201ENST00000455362 PRRC2BQ5JSZ5 2229 aaKnown RBP5.23□□□□□ -1.57
HMGB1P4-201ENST00000455362 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms